RNA–Protein interactions for RNA: ENST00000547415.1

NOVA1-208, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 3

Gene NOVA1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-208ENST00000547415 ATMINO43313 823 aaPredicted RBP11.54□□□□□ -0.56
NOVA1-208ENST00000547415 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
NOVA1-208ENST00000547415 MS4A3Q96HJ5 214 aa11.47□□□□□ -0.57
NOVA1-208ENST00000547415 STAG3Q9UJ98 1225 aa11.46□□□□□ -0.57
NOVA1-208ENST00000547415 SCUBE2Q9NQ36 999 aa11.45□□□□□ -0.58
NOVA1-208ENST00000547415 CDAN1Q8IWY9 1227 aa11.44□□□□□ -0.58
NOVA1-208ENST00000547415 MNX1P50219 401 aaPredicted RBP11.43□□□□□ -0.58
NOVA1-208ENST00000547415 POTEFA5A3E0 1075 aa11.41□□□□□ -0.58
NOVA1-208ENST00000547415 NPM1P06748 294 aaKnown RBP eCLIP11.38□□□□□ -0.59
NOVA1-208ENST00000547415 ATN1P54259 1190 aaPredicted RBP11.38□□□□□ -0.59
NOVA1-208ENST00000547415 MMRN1Q13201 1228 aa11.25□□□□□ -0.61
NOVA1-208ENST00000547415 BMP2KQ9NSY1 1161 aaPredicted RBP11.24□□□□□ -0.61
NOVA1-208ENST00000547415 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
NOVA1-208ENST00000547415 ST18O60284 1047 aa11.2□□□□□ -0.62
NOVA1-208ENST00000547415 SPNS2Q8IVW8 549 aa11.2□□□□□ -0.62
NOVA1-208ENST00000547415 COLQQ9Y215 455 aaPredicted RBP11.2□□□□□ -0.62
NOVA1-208ENST00000547415 CCDC61Q9Y6R9 512 aa11.2□□□□□ -0.62
NOVA1-208ENST00000547415 KIF12Q96FN5 646 aa11.19□□□□□ -0.62
NOVA1-208ENST00000547415 TSPYL2Q9H2G4 693 aaPredicted RBP11.15□□□□□ -0.62
NOVA1-208ENST00000547415 TIE1P35590 1138 aa11.14□□□□□ -0.63
NOVA1-208ENST00000547415 SPDYE4A6NLX3 237 aa11.09□□□□□ -0.63
NOVA1-208ENST00000547415 SEC24BO95487 1268 aa11.08□□□□□ -0.64
NOVA1-208ENST00000547415 MAP3K13O43283 966 aa11.07□□□□□ -0.64
NOVA1-208ENST00000547415 SLAIN1Q8ND83 568 aa11.07□□□□□ -0.64
NOVA1-208ENST00000547415 TTLL13PA6NNM8 815 aa11.06□□□□□ -0.64
NOVA1-208ENST00000547415 IER5LQ5T953 404 aa11.02□□□□□ -0.65
NOVA1-208ENST00000547415 TMEM121BQ9BXQ6 578 aaPredicted RBP10.98□□□□□ -0.65
NOVA1-208ENST00000547415 TRIM35Q9UPQ4 493 aa10.97□□□□□ -0.65
NOVA1-208ENST00000547415 MARVELD3Q96A59 401 aa10.89□□□□□ -0.67
NOVA1-208ENST00000547415 RASEFQ8IZ41 740 aa10.88□□□□□ -0.67
NOVA1-208ENST00000547415 SGIP1Q9BQI5 828 aa10.87□□□□□ -0.67
NOVA1-208ENST00000547415 SNPHO15079 494 aa10.84□□□□□ -0.67
NOVA1-208ENST00000547415 IRX5P78411 483 aaPredicted RBP10.83□□□□□ -0.68
NOVA1-208ENST00000547415 KRTAP3-3Q9BYR6 98 aa10.83□□□□□ -0.68
NOVA1-208ENST00000547415 KRTAP3-2Q9BYR7 98 aa10.83□□□□□ -0.68
NOVA1-208ENST00000547415 PLCG2P16885 1265 aa10.81□□□□□ -0.68
NOVA1-208ENST00000547415 PCDHB13Q9Y5F0 798 aa10.8□□□□□ -0.68
NOVA1-208ENST00000547415 POTEB3A0JP26 581 aa10.79□□□□□ -0.68
NOVA1-208ENST00000547415 POTEBQ6S5H4 581 aa10.79□□□□□ -0.68
NOVA1-208ENST00000547415 PROM2Q8N271 834 aa10.79□□□□□ -0.68
NOVA1-208ENST00000547415 IFNL1Q8IU54 200 aa10.75□□□□□ -0.69
NOVA1-208ENST00000547415 TMEM106CQ9BVX2 250 aa10.75□□□□□ -0.69
NOVA1-208ENST00000547415 OCEL1Q9H607 264 aa10.73□□□□□ -0.69
NOVA1-208ENST00000547415 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.73□□□□□ -0.69
NOVA1-208ENST00000547415 CSRNP3Q8WYN3 585 aa10.72□□□□□ -0.69
NOVA1-208ENST00000547415 HS3ST6Q96QI5 342 aa10.71□□□□□ -0.69
NOVA1-208ENST00000547415 EMP3P54852 163 aa10.7□□□□□ -0.7
NOVA1-208ENST00000547415 MIER1Q8N108 512 aa10.66□□□□□ -0.7
NOVA1-208ENST00000547415 FAM205CA6NFA0 338 aa10.65□□□□□ -0.7
NOVA1-208ENST00000547415 PLEKHG5O94827 1062 aa10.64□□□□□ -0.71
NOVA1-208ENST00000547415 NUBP1P53384 320 aa10.62□□□□□ -0.71
NOVA1-208ENST00000547415 PDCD7Q8N8D1 485 aaKnown RBP10.54□□□□□ -0.72
NOVA1-208ENST00000547415 RNF166Q96A37 237 aaPredicted RBP10.51□□□□□ -0.73
NOVA1-208ENST00000547415 C3orf67Q6ZVT6 689 aa10.49□□□□□ -0.73
NOVA1-208ENST00000547415 L3MBTL3Q96JM7 780 aaPredicted RBP10.47□□□□□ -0.73
NOVA1-208ENST00000547415 FAM212AQ96EL1 285 aa10.45□□□□□ -0.74
NOVA1-208ENST00000547415 PLCD3Q8N3E9 789 aa10.44□□□□□ -0.74
NOVA1-208ENST00000547415 HOXB3P14651 431 aaPredicted RBP10.43□□□□□ -0.74
NOVA1-208ENST00000547415 ZBTB47Q9UFB7 747 aaPredicted RBP10.42□□□□□ -0.74
NOVA1-208ENST00000547415 PCDHB8Q9UN66 801 aa10.41□□□□□ -0.74
NOVA1-208ENST00000547415 HOXB1P14653 301 aaPredicted RBP10.4□□□□□ -0.74
NOVA1-208ENST00000547415 MYT1LQ9UL68 1186 aa10.4□□□□□ -0.74
NOVA1-208ENST00000547415 PYGBP11216 843 aa10.37□□□□□ -0.75
NOVA1-208ENST00000547415 ERBB3P21860 1342 aa10.34□□□□□ -0.75
NOVA1-208ENST00000547415 ILDR1Q86SU0 546 aaPredicted RBP10.33□□□□□ -0.76
NOVA1-208ENST00000547415 MKRN3Q13064 507 aaKnown RBP10.32□□□□□ -0.76
NOVA1-208ENST00000547415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.31□□□□□ -0.76
NOVA1-208ENST00000547415 DCAF8Q5TAQ9 597 aa10.29□□□□□ -0.76
NOVA1-208ENST00000547415 DPY19L2Q6NUT2 758 aa10.27□□□□□ -0.77
NOVA1-208ENST00000547415 VARS2Q5ST30 1063 aaKnown RBP10.26□□□□□ -0.77
NOVA1-208ENST00000547415 ZNF687Q8N1G0 1237 aa10.26□□□□□ -0.77
NOVA1-208ENST00000547415 ZNF710Q8N1W2 664 aa10.26□□□□□ -0.77
NOVA1-208ENST00000547415 GOLGA2Q08379 1002 aa10.25□□□□□ -0.77
NOVA1-208ENST00000547415 PTGER2P43116 358 aa10.24□□□□□ -0.77
NOVA1-208ENST00000547415 DOK7Q18PE1 504 aa10.23□□□□□ -0.77
NOVA1-208ENST00000547415 ZNF467Q7Z7K2 595 aaPredicted RBP10.19□□□□□ -0.78
NOVA1-208ENST00000547415 BOLA1Q9Y3E2 137 aa10.19□□□□□ -0.78
NOVA1-208ENST00000547415 PSEN1P49768 467 aa10.15□□□□□ -0.78
NOVA1-208ENST00000547415 RIMBP2O15034 1052 aa10.12□□□□□ -0.79
NOVA1-208ENST00000547415 GPR153Q6NV75 609 aa10.12□□□□□ -0.79
NOVA1-208ENST00000547415 ZSWIM6Q9HCJ5 1215 aa10.12□□□□□ -0.79
NOVA1-208ENST00000547415 CHRM1P11229 460 aaPredicted RBP10.11□□□□□ -0.79
NOVA1-208ENST00000547415 PLA2G2EQ9NZK7 142 aa10.11□□□□□ -0.79
NOVA1-208ENST00000547415 G3V3G9 751 aa10.1□□□□□ -0.79
NOVA1-208ENST00000547415 ANKRD13DQ6ZTN6 518 aa10.1□□□□□ -0.79
NOVA1-208ENST00000547415 TMEM92Q6UXU6 159 aa10.03□□□□□ -0.8
NOVA1-208ENST00000547415 LSM11P83369 360 aaKnown RBP eCLIP10.02□□□□□ -0.81
NOVA1-208ENST00000547415 GSE1Q14687 1217 aa10.02□□□□□ -0.81
NOVA1-208ENST00000547415 EHMT2Q96KQ7 1210 aa10.02□□□□□ -0.81
NOVA1-208ENST00000547415 PDAP1Q13442 181 aaKnown RBP10.01□□□□□ -0.81
NOVA1-208ENST00000547415 CABP2Q9NPB3 220 aa10.01□□□□□ -0.81
NOVA1-208ENST00000547415 HCSTQ9UBK5 93 aa9.98□□□□□ -0.81
NOVA1-208ENST00000547415 ARSIQ5FYB1 569 aa9.96□□□□□ -0.82
NOVA1-208ENST00000547415 ZNF316A6NFI3 1004 aaPredicted RBP9.95□□□□□ -0.82
NOVA1-208ENST00000547415 POTEEQ6S8J3 1075 aa9.91□□□□□ -0.82
NOVA1-208ENST00000547415 MICALL2Q8IY33 904 aa9.9□□□□□ -0.82
NOVA1-208ENST00000547415 KHSRPQ92945 711 aaKnown RBP eCLIP9.9□□□□□ -0.82
NOVA1-208ENST00000547415 PBX2P40425 430 aa9.86□□□□□ -0.83
NOVA1-208ENST00000547415 EFCAB3Q8N7B9 438 aa9.83□□□□□ -0.84
NOVA1-208ENST00000547415 AXIN2Q9Y2T1 843 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms