RNA–Protein interactions for RNA: ENST00000546556.1

CPM-203, Transcript of carboxypeptidase M, humanhuman

TSL 2

Gene CPM, Length 697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-203ENST00000546556 TAOK2Q9UL54 1235 aa13.57□□□□□ -0.24
CPM-203ENST00000546556 VSIG10Q8N0Z9 540 aa13.56□□□□□ -0.24
CPM-203ENST00000546556 CHGAP10645 457 aaKnown RBP13.55□□□□□ -0.24
CPM-203ENST00000546556 CHRM1P11229 460 aaPredicted RBP13.55□□□□□ -0.24
CPM-203ENST00000546556 PAXIP1Q6ZW49 1069 aaPredicted RBP13.54□□□□□ -0.24
CPM-203ENST00000546556 SPRYD3Q8NCJ5 442 aa13.53□□□□□ -0.24
CPM-203ENST00000546556 HS6ST3Q8IZP7 471 aa13.52□□□□□ -0.25
CPM-203ENST00000546556 RNF25Q96BH1 459 aaPredicted RBP13.51□□□□□ -0.25
CPM-203ENST00000546556 DNAJC5Q9H3Z4 198 aa13.51□□□□□ -0.25
CPM-203ENST00000546556 RASEFQ8IZ41 740 aa13.5□□□□□ -0.25
CPM-203ENST00000546556 RIOK3O14730 519 aaKnown RBP13.49□□□□□ -0.25
CPM-203ENST00000546556 CFAP44Q96MT7 982 aa13.49□□□□□ -0.25
CPM-203ENST00000546556 CHRDL2Q6WN34 429 aa13.44□□□□□ -0.26
CPM-203ENST00000546556 VGFO15240 615 aaPredicted RBP13.42□□□□□ -0.26
CPM-203ENST00000546556 SGIP1Q9BQI5 828 aa13.42□□□□□ -0.26
CPM-203ENST00000546556 FARP1Q9Y4F1 1045 aaPredicted RBP13.39□□□□□ -0.27
CPM-203ENST00000546556 CHADLQ6NUI6 762 aa13.38□□□□□ -0.27
CPM-203ENST00000546556 FXR2P51116 673 aaKnown RBP eCLIP13.35□□□□□ -0.27
CPM-203ENST00000546556 PYGBP11216 843 aa13.34□□□□□ -0.27
CPM-203ENST00000546556 STK25O00506 426 aa13.32□□□□□ -0.28
CPM-203ENST00000546556 PRKAR2AP13861 404 aaKnown RBP13.32□□□□□ -0.28
CPM-203ENST00000546556 KDM2AQ9Y2K7 1162 aa13.32□□□□□ -0.28
CPM-203ENST00000546556 BCANQ96GW7 911 aa13.29□□□□□ -0.28
CPM-203ENST00000546556 TSHZ2Q9NRE2 1034 aa13.29□□□□□ -0.28
CPM-203ENST00000546556 NKX1-1Q15270 411 aaPredicted RBP13.27□□□□□ -0.29
CPM-203ENST00000546556 TSPYL2Q9H2G4 693 aaPredicted RBP13.27□□□□□ -0.29
CPM-203ENST00000546556 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.26□□□□□ -0.29
CPM-203ENST00000546556 ZNF467Q7Z7K2 595 aaPredicted RBP13.26□□□□□ -0.29
CPM-203ENST00000546556 ZFP91Q96JP5 570 aaPredicted RBP13.26□□□□□ -0.29
CPM-203ENST00000546556 RYDENQ9NUL5 291 aaKnown RBP13.24□□□□□ -0.29
CPM-203ENST00000546556 GTPBP6O43824 516 aaPredicted RBP13.23□□□□□ -0.29
CPM-203ENST00000546556 BCL11BQ9C0K0 894 aaPredicted RBP13.23□□□□□ -0.29
CPM-203ENST00000546556 STK24Q9Y6E0 443 aa13.23□□□□□ -0.29
CPM-203ENST00000546556 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.29
CPM-203ENST00000546556 PAK3O75914 559 aaPredicted RBP13.18□□□□□ -0.3
CPM-203ENST00000546556 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
CPM-203ENST00000546556 PDAP1Q13442 181 aaKnown RBP13.16□□□□□ -0.3
CPM-203ENST00000546556 ZNF579Q8NAF0 562 aaKnown RBP13.15□□□□□ -0.3
CPM-203ENST00000546556 PCDHB8Q9UN66 801 aa13.09□□□□□ -0.31
CPM-203ENST00000546556 PCDHB13Q9Y5F0 798 aa13.09□□□□□ -0.31
CPM-203ENST00000546556 PSEN1P49768 467 aa13.06□□□□□ -0.32
CPM-203ENST00000546556 KIF12Q96FN5 646 aa13.05□□□□□ -0.32
CPM-203ENST00000546556 MAP3K13O43283 966 aa13.01□□□□□ -0.33
CPM-203ENST00000546556 IFNL1Q8IU54 200 aa13.01□□□□□ -0.33
CPM-203ENST00000546556 ZRANB1Q9UGI0 708 aa12.98□□□□□ -0.33
CPM-203ENST00000546556 CD44P16070 742 aaKnown RBP12.96□□□□□ -0.33
CPM-203ENST00000546556 SP7Q8TDD2 431 aaPredicted RBP12.94□□□□□ -0.34
CPM-203ENST00000546556 SOX12O15370 315 aa12.92□□□□□ -0.34
CPM-203ENST00000546556 MFRPQ9BY79 579 aa12.92□□□□□ -0.34
CPM-203ENST00000546556 NBR1Q14596 966 aa12.9□□□□□ -0.34
CPM-203ENST00000546556 NLRP6P59044 892 aa12.87□□□□□ -0.35
CPM-203ENST00000546556 CABP2Q9NPB3 220 aa12.87□□□□□ -0.35
CPM-203ENST00000546556 C19orf67A6NJJ6 358 aa12.86□□□□□ -0.35
CPM-203ENST00000546556 EFCAB3Q8N7B9 438 aa12.86□□□□□ -0.35
CPM-203ENST00000546556 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
CPM-203ENST00000546556 HAX1O00165 279 aa12.84□□□□□ -0.35
CPM-203ENST00000546556 FBXO22Q8NEZ5 403 aa12.84□□□□□ -0.35
CPM-203ENST00000546556 EVX2Q03828 476 aa12.83□□□□□ -0.36
CPM-203ENST00000546556 P3H3Q8IVL6 736 aa12.81□□□□□ -0.36
CPM-203ENST00000546556 WDR70Q9NW82 654 aa12.8□□□□□ -0.36
CPM-203ENST00000546556 PRKCSHP14314 528 aaPredicted RBP12.79□□□□□ -0.36
CPM-203ENST00000546556 PHF8Q9UPP1 1060 aa12.79□□□□□ -0.36
CPM-203ENST00000546556 CADPS2Q86UW7 1296 aa12.78□□□□□ -0.36
CPM-203ENST00000546556 TPRNQ4KMQ1 711 aa12.77□□□□□ -0.37
CPM-203ENST00000546556 PPP1R37O75864 691 aa12.75□□□□□ -0.37
CPM-203ENST00000546556 MS4A3Q96HJ5 214 aa12.75□□□□□ -0.37
CPM-203ENST00000546556 TMEM106CQ9BVX2 250 aa12.75□□□□□ -0.37
CPM-203ENST00000546556 ABCC9O60706 1549 aa12.74□□□□□ -0.37
CPM-203ENST00000546556 GOLGA2Q08379 1002 aa12.74□□□□□ -0.37
CPM-203ENST00000546556 TIE1P35590 1138 aa12.73□□□□□ -0.37
CPM-203ENST00000546556 CLCN6P51797 869 aa12.73□□□□□ -0.37
CPM-203ENST00000546556 MKRN3Q13064 507 aaKnown RBP12.69□□□□□ -0.38
CPM-203ENST00000546556 TRPC6Q9Y210 931 aa12.68□□□□□ -0.38
CPM-203ENST00000546556 MS4A4AQ96JQ5 239 aa12.67□□□□□ -0.38
CPM-203ENST00000546556 KCNV2Q8TDN2 545 aa12.64□□□□□ -0.39
CPM-203ENST00000546556 TTLL13PA6NNM8 815 aa12.63□□□□□ -0.39
CPM-203ENST00000546556 ILDR1Q86SU0 546 aaPredicted RBP12.63□□□□□ -0.39
CPM-203ENST00000546556 PDE4AP27815 886 aa12.62□□□□□ -0.39
CPM-203ENST00000546556 E2F4Q16254 413 aa12.6□□□□□ -0.39
CPM-203ENST00000546556 ARHGEF1Q92888 912 aaKnown RBP12.6□□□□□ -0.39
CPM-203ENST00000546556 BMP2KQ9NSY1 1161 aaPredicted RBP12.59□□□□□ -0.39
CPM-203ENST00000546556 NCKAP5LQ9HCH0 1330 aa12.57□□□□□ -0.4
CPM-203ENST00000546556 GALR2O43603 387 aaPredicted RBP12.56□□□□□ -0.4
CPM-203ENST00000546556 MFSD10Q14728 455 aa12.56□□□□□ -0.4
CPM-203ENST00000546556 CRISPLD2Q9H0B8 497 aa12.56□□□□□ -0.4
CPM-203ENST00000546556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.56□□□□□ -0.4
CPM-203ENST00000546556 LARP6Q9BRS8 491 aaKnown RBP12.54□□□□□ -0.4
CPM-203ENST00000546556 TRIM35Q9UPQ4 493 aa12.54□□□□□ -0.4
CPM-203ENST00000546556 DDX27Q96GQ7 796 aaKnown RBP12.5□□□□□ -0.41
CPM-203ENST00000546556 ARIH1Q9Y4X5 557 aaPredicted RBP12.5□□□□□ -0.41
CPM-203ENST00000546556 TULP1O00294 542 aaPredicted RBP12.48□□□□□ -0.41
CPM-203ENST00000546556 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.47□□□□□ -0.41
CPM-203ENST00000546556 GABBR2O75899 941 aa12.46□□□□□ -0.41
CPM-203ENST00000546556 IER5LQ5T953 404 aa12.46□□□□□ -0.41
CPM-203ENST00000546556 ASTLQ6HA08 431 aaPredicted RBP12.46□□□□□ -0.41
CPM-203ENST00000546556 CAMK2BQ13554 666 aa12.45□□□□□ -0.42
CPM-203ENST00000546556 ATMINO43313 823 aaPredicted RBP12.44□□□□□ -0.42
CPM-203ENST00000546556 ATN1P54259 1190 aaPredicted RBP12.44□□□□□ -0.42
CPM-203ENST00000546556 GPHNQ9NQX3 736 aaPredicted RBP12.44□□□□□ -0.42
CPM-203ENST00000546556 LMOD2Q6P5Q4 547 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms