RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 ZBTB47Q9UFB7 747 aaPredicted RBP9.74□□□□□ -0.85
LRP6-207ENST00000545658 VASPP50552 380 aaPredicted RBP9.71□□□□□ -0.86
LRP6-207ENST00000545658 DCBLD2Q96PD2 775 aa9.71□□□□□ -0.86
LRP6-207ENST00000545658 POTEIP0CG38 1075 aa9.7□□□□□ -0.86
LRP6-207ENST00000545658 CCDC61Q9Y6R9 512 aa9.69□□□□□ -0.86
LRP6-207ENST00000545658 NUBP1P53384 320 aa9.68□□□□□ -0.86
LRP6-207ENST00000545658 KLHL34Q8N239 644 aa9.66□□□□□ -0.86
LRP6-207ENST00000545658 MS4A3Q96HJ5 214 aa9.66□□□□□ -0.86
LRP6-207ENST00000545658 KIF12Q96FN5 646 aa9.63□□□□□ -0.87
LRP6-207ENST00000545658 FAM212AQ96EL1 285 aa9.62□□□□□ -0.87
LRP6-207ENST00000545658 ABCC9O60706 1549 aa9.61□□□□□ -0.87
LRP6-207ENST00000545658 MAP3K13O43283 966 aa9.6□□□□□ -0.87
LRP6-207ENST00000545658 DCAF8Q5TAQ9 597 aa9.6□□□□□ -0.87
LRP6-207ENST00000545658 IFNLR1Q8IU57 520 aaPredicted RBP9.55□□□□□ -0.88
LRP6-207ENST00000545658 PELP1Q8IZL8 1130 aaKnown RBP9.53□□□□□ -0.88
LRP6-207ENST00000545658 TRPC6Q9Y210 931 aa9.53□□□□□ -0.88
LRP6-207ENST00000545658 PCDHB13Q9Y5F0 798 aa9.53□□□□□ -0.88
LRP6-207ENST00000545658 ATMINO43313 823 aaPredicted RBP9.52□□□□□ -0.89
LRP6-207ENST00000545658 PYGBP11216 843 aa9.51□□□□□ -0.89
LRP6-207ENST00000545658 ASTLQ6HA08 431 aaPredicted RBP9.51□□□□□ -0.89
LRP6-207ENST00000545658 SPOCK2Q92563 424 aa9.5□□□□□ -0.89
LRP6-207ENST00000545658 BMP2KQ9NSY1 1161 aaPredicted RBP9.49□□□□□ -0.89
LRP6-207ENST00000545658 ATN1P54259 1190 aaPredicted RBP9.48□□□□□ -0.89
LRP6-207ENST00000545658 GSE1Q14687 1217 aa9.48□□□□□ -0.89
LRP6-207ENST00000545658 IFNL1Q8IU54 200 aa9.48□□□□□ -0.89
LRP6-207ENST00000545658 SGIP1Q9BQI5 828 aa9.48□□□□□ -0.89
LRP6-207ENST00000545658 TIE1P35590 1138 aa9.45□□□□□ -0.9
LRP6-207ENST00000545658 METRNQ9UJH8 293 aa9.44□□□□□ -0.9
LRP6-207ENST00000545658 CIZ1Q9ULV3 898 aaPredicted RBP9.44□□□□□ -0.9
LRP6-207ENST00000545658 TTLL13PA6NNM8 815 aa9.43□□□□□ -0.9
LRP6-207ENST00000545658 SLC39A7Q92504 469 aa9.43□□□□□ -0.9
LRP6-207ENST00000545658 C7P10643 843 aa9.42□□□□□ -0.9
LRP6-207ENST00000545658 PCDHB8Q9UN66 801 aa9.42□□□□□ -0.9
LRP6-207ENST00000545658 TMEM106CQ9BVX2 250 aa9.4□□□□□ -0.9
LRP6-207ENST00000545658 POTEB2H3BUK9 544 aa9.39□□□□□ -0.91
LRP6-207ENST00000545658 TRIM35Q9UPQ4 493 aa9.38□□□□□ -0.91
LRP6-207ENST00000545658 CHRM1P11229 460 aaPredicted RBP9.36□□□□□ -0.91
LRP6-207ENST00000545658 POTEMA6NI47 508 aa9.34□□□□□ -0.91
LRP6-207ENST00000545658 ZNF467Q7Z7K2 595 aaPredicted RBP9.34□□□□□ -0.91
LRP6-207ENST00000545658 SEC24BO95487 1268 aa9.33□□□□□ -0.92
LRP6-207ENST00000545658 POTEFA5A3E0 1075 aa9.31□□□□□ -0.92
LRP6-207ENST00000545658 OTUD5Q96G74 571 aa9.31□□□□□ -0.92
LRP6-207ENST00000545658 COLQQ9Y215 455 aaPredicted RBP9.31□□□□□ -0.92
LRP6-207ENST00000545658 POTEJP0CG39 1038 aa9.29□□□□□ -0.92
LRP6-207ENST00000545658 IER5LQ5T953 404 aa9.29□□□□□ -0.92
LRP6-207ENST00000545658 POTEGQ6S5H5 508 aa9.29□□□□□ -0.92
LRP6-207ENST00000545658 PSEN1P49768 467 aa9.28□□□□□ -0.92
LRP6-207ENST00000545658 TRIM41Q8WV44 630 aa9.25□□□□□ -0.93
LRP6-207ENST00000545658 PLCG2P16885 1265 aa9.24□□□□□ -0.93
LRP6-207ENST00000545658 GOLGA2Q08379 1002 aa9.24□□□□□ -0.93
LRP6-207ENST00000545658 PDAP1Q13442 181 aaKnown RBP9.24□□□□□ -0.93
LRP6-207ENST00000545658 MAMSTRQ6ZN01 415 aa9.24□□□□□ -0.93
LRP6-207ENST00000545658 IRX5P78411 483 aaPredicted RBP9.22□□□□□ -0.93
LRP6-207ENST00000545658 SCUBE2Q9NQ36 999 aa9.22□□□□□ -0.93
LRP6-207ENST00000545658 MKRN3Q13064 507 aaKnown RBP9.2□□□□□ -0.94
LRP6-207ENST00000545658 OCEL1Q9H607 264 aa9.2□□□□□ -0.94
LRP6-207ENST00000545658 CABP2Q9NPB3 220 aa9.18□□□□□ -0.94
LRP6-207ENST00000545658 CCDC180Q9P1Z9 1646 aa9.17□□□□□ -0.94
LRP6-207ENST00000545658 RIOK3O14730 519 aaKnown RBP9.16□□□□□ -0.94
LRP6-207ENST00000545658 RNF25Q96BH1 459 aaPredicted RBP9.16□□□□□ -0.94
LRP6-207ENST00000545658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.15□□□□□ -0.945e-9■■■□□ 17.3
LRP6-207ENST00000545658 ECM2O94769 699 aaPredicted RBP9.12□□□□□ -0.95
LRP6-207ENST00000545658 PDCD7Q8N8D1 485 aaKnown RBP9.12□□□□□ -0.95
LRP6-207ENST00000545658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.1□□□□□ -0.95
LRP6-207ENST00000545658 VGFO15240 615 aaPredicted RBP9.1□□□□□ -0.95
LRP6-207ENST00000545658 ZFP91Q96JP5 570 aaPredicted RBP9.1□□□□□ -0.95
LRP6-207ENST00000545658 PKD2Q13563 968 aa9.09□□□□□ -0.95
LRP6-207ENST00000545658 PCDH10Q9P2E7 1040 aa9.09□□□□□ -0.95
LRP6-207ENST00000545658 EFCAB3Q8N7B9 438 aa9.08□□□□□ -0.96
LRP6-207ENST00000545658 SLAIN1Q8ND83 568 aa9.08□□□□□ -0.96
LRP6-207ENST00000545658 DPY19L2Q6NUT2 758 aa9.07□□□□□ -0.96
LRP6-207ENST00000545658 FAM163AQ96GL9 167 aaPredicted RBP9.06□□□□□ -0.96
LRP6-207ENST00000545658 L3MBTL3Q96JM7 780 aaPredicted RBP9.06□□□□□ -0.96
LRP6-207ENST00000545658 LCE2DQ5TA82 110 aaPredicted RBP9.05□□□□□ -0.96
LRP6-207ENST00000545658 RGL2O15211 777 aa9.04□□□□□ -0.96
LRP6-207ENST00000545658 ILDR1Q86SU0 546 aaPredicted RBP9.04□□□□□ -0.96
LRP6-207ENST00000545658 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.04□□□□□ -0.96
LRP6-207ENST00000545658 C3orf67Q6ZVT6 689 aa9.03□□□□□ -0.96
LRP6-207ENST00000545658 TAOK2Q9UL54 1235 aa9.03□□□□□ -0.96
LRP6-207ENST00000545658 BCL11BQ9C0K0 894 aaPredicted RBP9.02□□□□□ -0.97
LRP6-207ENST00000545658 STK24Q9Y6E0 443 aa9.01□□□□□ -0.97
LRP6-207ENST00000545658 G3V3G9 751 aa9□□□□□ -0.97
LRP6-207ENST00000545658 STK25O00506 426 aa9□□□□□ -0.97
LRP6-207ENST00000545658 BOLA1Q9Y3E2 137 aa8.99□□□□□ -0.97
LRP6-207ENST00000545658 SOX12O15370 315 aa8.98□□□□□ -0.97
LRP6-207ENST00000545658 PHF8Q9UPP1 1060 aa8.98□□□□□ -0.97
LRP6-207ENST00000545658 RB1CC1Q8TDY2 1594 aa8.95□□□□□ -0.98
LRP6-207ENST00000545658 MS4A4AQ96JQ5 239 aa8.94□□□□□ -0.98
LRP6-207ENST00000545658 NLRP6P59044 892 aa8.92□□□□□ -0.98
LRP6-207ENST00000545658 DNAJC5Q9H3Z4 198 aa8.92□□□□□ -0.98
LRP6-207ENST00000545658 SNPHO15079 494 aa8.9□□□□□ -0.98
LRP6-207ENST00000545658 ST18O60284 1047 aa8.9□□□□□ -0.98
LRP6-207ENST00000545658 MICALL2Q8IY33 904 aa8.9□□□□□ -0.98
LRP6-207ENST00000545658 TMEM121BQ9BXQ6 578 aaPredicted RBP8.9□□□□□ -0.98
LRP6-207ENST00000545658 MFRPQ9BY79 579 aa8.89□□□□□ -0.99
LRP6-207ENST00000545658 FBXO22Q8NEZ5 403 aa8.88□□□□□ -0.99
LRP6-207ENST00000545658 CHGAP10645 457 aaKnown RBP8.84□□□□□ -0.99
LRP6-207ENST00000545658 TMEM92Q6UXU6 159 aa8.82□□□□□ -1
LRP6-207ENST00000545658 HS6ST3Q8IZP7 471 aa8.82□□□□□ -1
LRP6-207ENST00000545658 MARVELD3Q96A59 401 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms