RNA–Protein interactions for RNA: ENST00000543631.5

SPARCL1-210, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-210ENST00000543631 ATMINO43313 823 aaPredicted RBP10.33□□□□□ -0.76
SPARCL1-210ENST00000543631 CCDC61Q9Y6R9 512 aa10.33□□□□□ -0.76
SPARCL1-210ENST00000543631 METRNQ9UJH8 293 aa10.28□□□□□ -0.76
SPARCL1-210ENST00000543631 TSPYL2Q9H2G4 693 aaPredicted RBP10.27□□□□□ -0.77
SPARCL1-210ENST00000543631 KIF12Q96FN5 646 aa10.26□□□□□ -0.77
SPARCL1-210ENST00000543631 TRPC6Q9Y210 931 aa10.25□□□□□ -0.77
SPARCL1-210ENST00000543631 ATN1P54259 1190 aaPredicted RBP10.23□□□□□ -0.77
SPARCL1-210ENST00000543631 SLC39A7Q92504 469 aa10.23□□□□□ -0.77
SPARCL1-210ENST00000543631 POTEFA5A3E0 1075 aa10.22□□□□□ -0.77
SPARCL1-210ENST00000543631 C7P10643 843 aa10.22□□□□□ -0.77
SPARCL1-210ENST00000543631 RASEFQ8IZ41 740 aa10.22□□□□□ -0.77
SPARCL1-210ENST00000543631 BMP2KQ9NSY1 1161 aaPredicted RBP10.2□□□□□ -0.78
SPARCL1-210ENST00000543631 LCE2DQ5TA82 110 aaPredicted RBP10.18□□□□□ -0.78
SPARCL1-210ENST00000543631 MAP3K13O43283 966 aa10.17□□□□□ -0.78
SPARCL1-210ENST00000543631 POTEMA6NI47 508 aa10.16□□□□□ -0.78
SPARCL1-210ENST00000543631 PLSCR2Q9NRY7 297 aa10.15□□□□□ -0.78
SPARCL1-210ENST00000543631 MIER1Q8N108 512 aa10.14□□□□□ -0.79
SPARCL1-210ENST00000543631 POTEGQ6S5H5 508 aa10.13□□□□□ -0.79
SPARCL1-210ENST00000543631 TIE1P35590 1138 aa10.11□□□□□ -0.79
SPARCL1-210ENST00000543631 NUBP1P53384 320 aa10.1□□□□□ -0.79
SPARCL1-210ENST00000543631 TTLL13PA6NNM8 815 aa10.08□□□□□ -0.8
SPARCL1-210ENST00000543631 COLQQ9Y215 455 aaPredicted RBP10.08□□□□□ -0.8
SPARCL1-210ENST00000543631 MAMSTRQ6ZN01 415 aa10.06□□□□□ -0.8
SPARCL1-210ENST00000543631 PLEKHG5O94827 1062 aa10.02□□□□□ -0.81
SPARCL1-210ENST00000543631 SGIP1Q9BQI5 828 aa10.02□□□□□ -0.81
SPARCL1-210ENST00000543631 PLCD3Q8N3E9 789 aa10.01□□□□□ -0.81
SPARCL1-210ENST00000543631 SCUBE2Q9NQ36 999 aa10.01□□□□□ -0.81
SPARCL1-210ENST00000543631 IFNL1Q8IU54 200 aa10□□□□□ -0.81
SPARCL1-210ENST00000543631 TRIM35Q9UPQ4 493 aa10□□□□□ -0.81
SPARCL1-210ENST00000543631 PCDHB13Q9Y5F0 798 aa9.99□□□□□ -0.81
SPARCL1-210ENST00000543631 CCDC180Q9P1Z9 1646 aa9.96□□□□□ -0.81
SPARCL1-210ENST00000543631 IER5LQ5T953 404 aa9.96□□□□□ -0.82
SPARCL1-210ENST00000543631 FAM163AQ96GL9 167 aaPredicted RBP9.95□□□□□ -0.82
SPARCL1-210ENST00000543631 PCDH10Q9P2E7 1040 aa9.95□□□□□ -0.82
SPARCL1-210ENST00000543631 FKBP8Q14318 412 aa9.94□□□□□ -0.82
SPARCL1-210ENST00000543631 ZBTB47Q9UFB7 747 aaPredicted RBP9.92□□□□□ -0.82
SPARCL1-210ENST00000543631 SEC24BO95487 1268 aa9.9□□□□□ -0.82
SPARCL1-210ENST00000543631 FAM212AQ96EL1 285 aa9.9□□□□□ -0.82
SPARCL1-210ENST00000543631 IRX5P78411 483 aaPredicted RBP9.89□□□□□ -0.83
SPARCL1-210ENST00000543631 TMEM106CQ9BVX2 250 aa9.89□□□□□ -0.83
SPARCL1-210ENST00000543631 PYGBP11216 843 aa9.82□□□□□ -0.84
SPARCL1-210ENST00000543631 SLAIN1Q8ND83 568 aa9.8□□□□□ -0.84
SPARCL1-210ENST00000543631 ST18O60284 1047 aa9.79□□□□□ -0.84
SPARCL1-210ENST00000543631 PLCG2P16885 1265 aa9.79□□□□□ -0.84
SPARCL1-210ENST00000543631 PCDHB8Q9UN66 801 aa9.79□□□□□ -0.84
SPARCL1-210ENST00000543631 DCAF8Q5TAQ9 597 aa9.77□□□□□ -0.85
SPARCL1-210ENST00000543631 CDAN1Q8IWY9 1227 aa9.76□□□□□ -0.85
SPARCL1-210ENST00000543631 OCEL1Q9H607 264 aa9.76□□□□□ -0.85
SPARCL1-210ENST00000543631 PDCD7Q8N8D1 485 aaKnown RBP9.74□□□□□ -0.85
SPARCL1-210ENST00000543631 VASPP50552 380 aaPredicted RBP9.71□□□□□ -0.86
SPARCL1-210ENST00000543631 FBXO3Q9UK99 471 aa9.71□□□□□ -0.86
SPARCL1-210ENST00000543631 CHRM1P11229 460 aaPredicted RBP9.67□□□□□ -0.86
SPARCL1-210ENST00000543631 ILDR1Q86SU0 546 aaPredicted RBP9.66□□□□□ -0.86
SPARCL1-210ENST00000543631 ZNF467Q7Z7K2 595 aaPredicted RBP9.64□□□□□ -0.87
SPARCL1-210ENST00000543631 GSE1Q14687 1217 aa9.63□□□□□ -0.87
SPARCL1-210ENST00000543631 TMEM121BQ9BXQ6 578 aaPredicted RBP9.63□□□□□ -0.87
SPARCL1-210ENST00000543631 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.62□□□□□ -0.87
SPARCL1-210ENST00000543631 PSEN1P49768 467 aa9.6□□□□□ -0.87
SPARCL1-210ENST00000543631 KLHL34Q8N239 644 aa9.59□□□□□ -0.87
SPARCL1-210ENST00000543631 MARVELD3Q96A59 401 aa9.59□□□□□ -0.87
SPARCL1-210ENST00000543631 IFNLR1Q8IU57 520 aaPredicted RBP9.57□□□□□ -0.88
SPARCL1-210ENST00000543631 POTEB3A0JP26 581 aa9.56□□□□□ -0.88
SPARCL1-210ENST00000543631 SNPHO15079 494 aa9.56□□□□□ -0.88
SPARCL1-210ENST00000543631 POTEBQ6S5H4 581 aa9.56□□□□□ -0.88
SPARCL1-210ENST00000543631 SPNS2Q8IVW8 549 aa9.56□□□□□ -0.88
SPARCL1-210ENST00000543631 MKRN3Q13064 507 aaKnown RBP9.55□□□□□ -0.88
SPARCL1-210ENST00000543631 MMRN1Q13201 1228 aa9.55□□□□□ -0.88
SPARCL1-210ENST00000543631 DPY19L2Q6NUT2 758 aa9.55□□□□□ -0.88
SPARCL1-210ENST00000543631 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.55□□□□□ -0.88
SPARCL1-210ENST00000543631 L3MBTL3Q96JM7 780 aaPredicted RBP9.53□□□□□ -0.88
SPARCL1-210ENST00000543631 PDAP1Q13442 181 aaKnown RBP9.52□□□□□ -0.89
SPARCL1-210ENST00000543631 C3orf67Q6ZVT6 689 aa9.52□□□□□ -0.89
SPARCL1-210ENST00000543631 KRTAP3-3Q9BYR6 98 aa9.5□□□□□ -0.89
SPARCL1-210ENST00000543631 KRTAP3-2Q9BYR7 98 aa9.5□□□□□ -0.89
SPARCL1-210ENST00000543631 DCAF8L2P0C7V8 631 aa9.49□□□□□ -0.89
SPARCL1-210ENST00000543631 GOLGA2Q08379 1002 aa9.49□□□□□ -0.89
SPARCL1-210ENST00000543631 SPOCK2Q92563 424 aa9.48□□□□□ -0.89
SPARCL1-210ENST00000543631 ZCCHC6Q5VYS8 1495 aaKnown RBP9.47□□□□□ -0.89
SPARCL1-210ENST00000543631 HOXB3P14651 431 aaPredicted RBP9.47□□□□□ -0.89
SPARCL1-210ENST00000543631 CABP2Q9NPB3 220 aa9.47□□□□□ -0.89
SPARCL1-210ENST00000543631 EMP3P54852 163 aa9.46□□□□□ -0.9
SPARCL1-210ENST00000543631 HS3ST6Q96QI5 342 aa9.46□□□□□ -0.9
SPARCL1-210ENST00000543631 ABCC9O60706 1549 aa9.45□□□□□ -0.9
SPARCL1-210ENST00000543631 BOLA1Q9Y3E2 137 aa9.44□□□□□ -0.9
SPARCL1-210ENST00000543631 CIZ1Q9ULV3 898 aaPredicted RBP9.43□□□□□ -0.9
SPARCL1-210ENST00000543631 FAM205CA6NFA0 338 aa9.41□□□□□ -0.9
SPARCL1-210ENST00000543631 DCAF1Q9Y4B6 1507 aa9.36□□□□□ -0.91
SPARCL1-210ENST00000543631 TMEM92Q6UXU6 159 aa9.36□□□□□ -0.91
SPARCL1-210ENST00000543631 EFCAB3Q8N7B9 438 aa9.36□□□□□ -0.91
SPARCL1-210ENST00000543631 RNF25Q96BH1 459 aaPredicted RBP9.36□□□□□ -0.91
SPARCL1-210ENST00000543631 HOXB1P14653 301 aaPredicted RBP9.35□□□□□ -0.91
SPARCL1-210ENST00000543631 MS4A4AQ96JQ5 239 aa9.33□□□□□ -0.92
SPARCL1-210ENST00000543631 MICALL2Q8IY33 904 aa9.3□□□□□ -0.92
SPARCL1-210ENST00000543631 TRIM41Q8WV44 630 aa9.3□□□□□ -0.92
SPARCL1-210ENST00000543631 NACADO15069 1562 aa9.29□□□□□ -0.92
SPARCL1-210ENST00000543631 MYO15BQ96JP2 1530 aa9.29□□□□□ -0.92
SPARCL1-210ENST00000543631 DOK7Q18PE1 504 aa9.27□□□□□ -0.93
SPARCL1-210ENST00000543631 G3V3G9 751 aa9.26□□□□□ -0.93
SPARCL1-210ENST00000543631 RB1CC1Q8TDY2 1594 aa9.25□□□□□ -0.93
SPARCL1-210ENST00000543631 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms