RNA–Protein interactions for RNA: ENST00000543216.5

KDM6A-212, Transcript of lysine demethylase 6A, humanhuman

TSL 1 (best) BASIC

Gene KDM6A, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM6A-212ENST00000543216 SUPT16HQ9Y5B9 1047 aaKnown RBP21.66■■□□□ 1.06
KDM6A-212ENST00000543216 CHGAP10645 457 aaKnown RBP21.65■■□□□ 1.06
KDM6A-212ENST00000543216 FBLN2P98095 1184 aa21.65■■□□□ 1.06
KDM6A-212ENST00000543216 TPRNQ4KMQ1 711 aa21.64■■□□□ 1.05
KDM6A-212ENST00000543216 HIRIP3Q9BW71 556 aaPredicted RBP21.64■■□□□ 1.05
KDM6A-212ENST00000543216 PPP4R2Q9NY27 417 aa21.6■■□□□ 1.05
KDM6A-212ENST00000543216 PLCB2Q00722 1185 aa21.59■■□□□ 1.05
KDM6A-212ENST00000543216 CASC1Q6TDU7 716 aa21.56■■□□□ 1.04
KDM6A-212ENST00000543216 L1TD1Q5T7N2 865 aaKnown RBP21.55■■□□□ 1.04
KDM6A-212ENST00000543216 EIF4G2P78344 907 aaKnown RBP eCLIP21.53■■□□□ 1.042e-7■■■■■ 35.3
KDM6A-212ENST00000543216 GOLGA6L6A8MZA4 724 aa21.53■■□□□ 1.04
KDM6A-212ENST00000543216 MSNP26038 577 aaKnown RBP21.53■■□□□ 1.04
KDM6A-212ENST00000543216 CHAF1AQ13111 956 aaPredicted RBP21.53■■□□□ 1.04
KDM6A-212ENST00000543216 STAG3Q9UJ98 1225 aa21.52■■□□□ 1.04
KDM6A-212ENST00000543216 KDM2AQ9Y2K7 1162 aa21.51■■□□□ 1.03
KDM6A-212ENST00000543216 ARID4BQ4LE39 1312 aaPredicted RBP21.49■■□□□ 1.03
KDM6A-212ENST00000543216 CHIC2Q9UKJ5 165 aa21.49■■□□□ 1.03
KDM6A-212ENST00000543216 HSP90AB1P08238 724 aaKnown RBP21.47■■□□□ 1.03
KDM6A-212ENST00000543216 RGS3P49796 1198 aa21.46■■□□□ 1.03
KDM6A-212ENST00000543216 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.45■■□□□ 1.02
KDM6A-212ENST00000543216 SENP3-EIF4A1A0A087X0R7 540 aa21.44■■□□□ 1.02
KDM6A-212ENST00000543216 NRDCO43847 1150 aa21.43■■□□□ 1.02
KDM6A-212ENST00000543216 FTSJ3Q8IY81 847 aaKnown RBP21.41■■□□□ 1.02
KDM6A-212ENST00000543216 ESF1Q9H501 851 aaKnown RBP21.41■■□□□ 1.02
KDM6A-212ENST00000543216 RBM19Q9Y4C8 960 aaKnown RBP21.4■■□□□ 1.02
KDM6A-212ENST00000543216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.4■■□□□ 1.02
KDM6A-212ENST00000543216 B4GALNT3Q6L9W6 998 aa21.38■■□□□ 1.01
KDM6A-212ENST00000543216 PABPN1Q86U42 306 aaKnown RBP eCLIP21.38■■□□□ 1.01
KDM6A-212ENST00000543216 HSCBQ8IWL3 235 aa21.33■■□□□ 1.01
KDM6A-212ENST00000543216 ARID3AQ99856 593 aa21.31■■□□□ 1
KDM6A-212ENST00000543216 PNNQ9H307 717 aaKnown RBP21.31■■□□□ 1
KDM6A-212ENST00000543216 TNNT3P45378 269 aaPredicted RBP21.29■■□□□ 1
KDM6A-212ENST00000543216 DRC7Q8IY82 874 aa21.28■■□□□ 1
KDM6A-212ENST00000543216 CFAP53Q96M91 514 aa21.27■■□□□ 1
KDM6A-212ENST00000543216 TULP1O00294 542 aaPredicted RBP21.26■□□□□ 0.99
KDM6A-212ENST00000543216 GOLGA6L4A6NEF3 574 aa21.25■□□□□ 0.99
KDM6A-212ENST00000543216 SPRYD3Q8NCJ5 442 aa21.24■□□□□ 0.99
KDM6A-212ENST00000543216 ZBTB7CA1YPR0 619 aa21.24■□□□□ 0.99
KDM6A-212ENST00000543216 FRAT1Q92837 279 aaPredicted RBP21.24■□□□□ 0.99
KDM6A-212ENST00000543216 KNSTRNQ9Y448 316 aa21.2■□□□□ 0.98
KDM6A-212ENST00000543216 TAOK2Q9UL54 1235 aa21.2■□□□□ 0.98
KDM6A-212ENST00000543216 KIAA2012Q0VF49 1180 aa21.19■□□□□ 0.98
KDM6A-212ENST00000543216 TSPY4P0CV99 314 aa21.19■□□□□ 0.98
KDM6A-212ENST00000543216 TSPY10P0CW01 314 aa21.19■□□□□ 0.98
KDM6A-212ENST00000543216 NEUROD2Q15784 382 aa21.18■□□□□ 0.98
KDM6A-212ENST00000543216 FGD1P98174 961 aa21.17■□□□□ 0.98
KDM6A-212ENST00000543216 CHMP4BQ9H444 224 aaKnown RBP21.17■□□□□ 0.98
KDM6A-212ENST00000543216 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
KDM6A-212ENST00000543216 PTMSP20962 102 aa21.15■□□□□ 0.98
KDM6A-212ENST00000543216 MS4A1P11836 297 aa21.15■□□□□ 0.98
KDM6A-212ENST00000543216 MTUS2Q5JR59 1369 aa21.15■□□□□ 0.98
KDM6A-212ENST00000543216 GZF1Q9H116 711 aaPredicted RBP21.14■□□□□ 0.97
KDM6A-212ENST00000543216 RRP7BPQ9NSQ0 103 aa21.14■□□□□ 0.97
KDM6A-212ENST00000543216 CCDC180Q9P1Z9 1646 aa21.12■□□□□ 0.97
KDM6A-212ENST00000543216 KCNJ4P48050 445 aa21.12■□□□□ 0.97
KDM6A-212ENST00000543216 GBP4Q96PP9 640 aa21.12■□□□□ 0.97
KDM6A-212ENST00000543216 A0A0G2JS52 829 aa21.12■□□□□ 0.97
KDM6A-212ENST00000543216 MAPK8IP3Q9UPT6 1336 aa21.11■□□□□ 0.97
KDM6A-212ENST00000543216 CDCA8Q53HL2 280 aa21.11■□□□□ 0.97
KDM6A-212ENST00000543216 NAP1L2Q9ULW6 460 aaPredicted RBP21.11■□□□□ 0.97
KDM6A-212ENST00000543216 HSP90AA2PQ14568 343 aaPredicted RBP21.1■□□□□ 0.97
KDM6A-212ENST00000543216 GOLGA6L3A6NEY3 463 aa21.1■□□□□ 0.97
KDM6A-212ENST00000543216 TSHZ2Q9NRE2 1034 aa21.08■□□□□ 0.96
KDM6A-212ENST00000543216 MCCP23508 829 aa21.07■□□□□ 0.96
KDM6A-212ENST00000543216 OS9Q13438 667 aaPredicted RBP21.06■□□□□ 0.96
KDM6A-212ENST00000543216 CARD11Q9BXL7 1154 aa21.05■□□□□ 0.96
KDM6A-212ENST00000543216 RSPH6AQ9H0K4 717 aa21.05■□□□□ 0.96
KDM6A-212ENST00000543216 CLIP1P30622 1438 aa21.04■□□□□ 0.96
KDM6A-212ENST00000543216 C14orf37Q86TY3 774 aa21.04■□□□□ 0.96
KDM6A-212ENST00000543216 VSIG10Q8N0Z9 540 aa21.04■□□□□ 0.96
KDM6A-212ENST00000543216 SLKQ9H2G2 1235 aaPredicted RBP21.03■□□□□ 0.96
KDM6A-212ENST00000543216 RGL3Q3MIN7 710 aa21.02■□□□□ 0.96
KDM6A-212ENST00000543216 NUDCQ9Y266 331 aa21.02■□□□□ 0.96
KDM6A-212ENST00000543216 CFAP44Q96MT7 982 aa21■□□□□ 0.95
KDM6A-212ENST00000543216 IPO9Q96P70 1041 aaKnown RBP21■□□□□ 0.95
KDM6A-212ENST00000543216 PLEKHG5O94827 1062 aa21■□□□□ 0.95
KDM6A-212ENST00000543216 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
KDM6A-212ENST00000543216 CCER2I3L3R5 266 aa20.98■□□□□ 0.95
KDM6A-212ENST00000543216 CC2D1BQ5T0F9 858 aaKnown RBP20.98■□□□□ 0.95
KDM6A-212ENST00000543216 TCERG1O14776 1098 aaKnown RBP20.98■□□□□ 0.95
KDM6A-212ENST00000543216 GOLGA6L1Q8N7Z2 621 aa20.97■□□□□ 0.95
KDM6A-212ENST00000543216 SYAP1Q96A49 352 aaPredicted RBP20.97■□□□□ 0.95
KDM6A-212ENST00000543216 NOC3LQ8WTT2 800 aaKnown RBP20.94■□□□□ 0.94
KDM6A-212ENST00000543216 ABCC9O60706 1549 aa20.93■□□□□ 0.94
KDM6A-212ENST00000543216 NPM1P06748 294 aaKnown RBP eCLIP20.92■□□□□ 0.94
KDM6A-212ENST00000543216 SIN3AQ96ST3 1273 aa20.92■□□□□ 0.94
KDM6A-212ENST00000543216 PPP1R15AO75807 674 aaPredicted RBP20.9■□□□□ 0.94
KDM6A-212ENST00000543216 MYO15BQ96JP2 1530 aa20.89■□□□□ 0.93
KDM6A-212ENST00000543216 U2SURPO15042 1029 aaKnown RBP20.87■□□□□ 0.93
KDM6A-212ENST00000543216 GNL2Q13823 731 aaKnown RBP20.87■□□□□ 0.93
KDM6A-212ENST00000543216 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
KDM6A-212ENST00000543216 TPM4P67936 248 aa20.85■□□□□ 0.93
KDM6A-212ENST00000543216 HTATSF1O43719 755 aaKnown RBP20.85■□□□□ 0.93
KDM6A-212ENST00000543216 SETQ01105 290 aaPredicted RBP20.85■□□□□ 0.93
KDM6A-212ENST00000543216 RSF1Q96T23 1441 aaPredicted RBP20.84■□□□□ 0.93
KDM6A-212ENST00000543216 CALD1Q05682 793 aaKnown RBP20.84■□□□□ 0.93
KDM6A-212ENST00000543216 CLSTN1O94985 981 aa20.84■□□□□ 0.93
KDM6A-212ENST00000543216 USP35Q9P2H5 1018 aa20.83■□□□□ 0.92
KDM6A-212ENST00000543216 KIAA1211Q6ZU35 1233 aa20.81■□□□□ 0.92
KDM6A-212ENST00000543216 A0A0U1RQG5 324 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms