RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 CCDC61Q9Y6R9 512 aa15.43■□□□□ 0.06
PAAF1-212ENST00000543079 GALR2O43603 387 aaPredicted RBP15.41■□□□□ 0.06
PAAF1-212ENST00000543079 POTEIP0CG38 1075 aa15.38■□□□□ 0.05
PAAF1-212ENST00000543079 DCBLD2Q96PD2 775 aa15.36■□□□□ 0.05
PAAF1-212ENST00000543079 ABCC9O60706 1549 aa15.34■□□□□ 0.05
PAAF1-212ENST00000543079 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
PAAF1-212ENST00000543079 KIF12Q96FN5 646 aa15.32■□□□□ 0.04
PAAF1-212ENST00000543079 FAM212AQ96EL1 285 aa15.3■□□□□ 0.04
PAAF1-212ENST00000543079 MS4A3Q96HJ5 214 aa15.3■□□□□ 0.04
PAAF1-212ENST00000543079 MAP3K13O43283 966 aa15.23■□□□□ 0.03
PAAF1-212ENST00000543079 IFNLR1Q8IU57 520 aaPredicted RBP15.23■□□□□ 0.03
PAAF1-212ENST00000543079 DCAF8Q5TAQ9 597 aa15.22■□□□□ 0.03
PAAF1-212ENST00000543079 SGIP1Q9BQI5 828 aa15.18■□□□□ 0.02
PAAF1-212ENST00000543079 ASTLQ6HA08 431 aaPredicted RBP15.14■□□□□ 0.01
PAAF1-212ENST00000543079 GSE1Q14687 1217 aa15.13■□□□□ 0.01
PAAF1-212ENST00000543079 SPOCK2Q92563 424 aa15.13■□□□□ 0.01
PAAF1-212ENST00000543079 ATMINO43313 823 aaPredicted RBP15.12■□□□□ 0.01
PAAF1-212ENST00000543079 PCDHB13Q9Y5F0 798 aa15.12■□□□□ 0.01
PAAF1-212ENST00000543079 LHX8Q68G74 356 aa15.11■□□□□ 0.01
PAAF1-212ENST00000543079 PELP1Q8IZL8 1130 aaKnown RBP15.09■□□□□ 0.01
PAAF1-212ENST00000543079 TRPC6Q9Y210 931 aa15.08■□□□□ 0
PAAF1-212ENST00000543079 PYGBP11216 843 aa15.07■□□□□ 0
PAAF1-212ENST00000543079 TIE1P35590 1138 aa15.07■□□□□ 0
PAAF1-212ENST00000543079 IFNL1Q8IU54 200 aa15.05■□□□□ -0
PAAF1-212ENST00000543079 BMP2KQ9NSY1 1161 aaPredicted RBP15.05■□□□□ -0
PAAF1-212ENST00000543079 ATN1P54259 1190 aaPredicted RBP15.03■□□□□ -0
PAAF1-212ENST00000543079 SLC39A7Q92504 469 aa15□□□□□ -0.01
PAAF1-212ENST00000543079 CHRM1P11229 460 aaPredicted RBP14.99□□□□□ -0.01
PAAF1-212ENST00000543079 TTLL13PA6NNM8 815 aa14.98□□□□□ -0.01
PAAF1-212ENST00000543079 C7P10643 843 aa14.98□□□□□ -0.01
PAAF1-212ENST00000543079 CIZ1Q9ULV3 898 aaPredicted RBP14.96□□□□□ -0.01
PAAF1-212ENST00000543079 METRNQ9UJH8 293 aa14.95□□□□□ -0.02
PAAF1-212ENST00000543079 PCDHB8Q9UN66 801 aa14.91□□□□□ -0.02
PAAF1-212ENST00000543079 ZNF467Q7Z7K2 595 aaPredicted RBP14.9□□□□□ -0.02
PAAF1-212ENST00000543079 TMEM106CQ9BVX2 250 aa14.89□□□□□ -0.03
PAAF1-212ENST00000543079 TRIM35Q9UPQ4 493 aa14.88□□□□□ -0.03
PAAF1-212ENST00000543079 POTEB2H3BUK9 544 aa14.87□□□□□ -0.03
PAAF1-212ENST00000543079 TRIM41Q8WV44 630 aa14.83□□□□□ -0.04
PAAF1-212ENST00000543079 IER5LQ5T953 404 aa14.82□□□□□ -0.04
PAAF1-212ENST00000543079 POTEFA5A3E0 1075 aa14.79□□□□□ -0.04
PAAF1-212ENST00000543079 SEC24BO95487 1268 aa14.75□□□□□ -0.05
PAAF1-212ENST00000543079 OTUD5Q96G74 571 aa14.75□□□□□ -0.05
PAAF1-212ENST00000543079 PSEN1P49768 467 aa14.74□□□□□ -0.05
PAAF1-212ENST00000543079 COLQQ9Y215 455 aaPredicted RBP14.74□□□□□ -0.05
PAAF1-212ENST00000543079 POTEJP0CG39 1038 aa14.72□□□□□ -0.05
PAAF1-212ENST00000543079 PDAP1Q13442 181 aaKnown RBP14.72□□□□□ -0.05
PAAF1-212ENST00000543079 MAMSTRQ6ZN01 415 aa14.68□□□□□ -0.06
PAAF1-212ENST00000543079 IRX5P78411 483 aaPredicted RBP14.67□□□□□ -0.06
PAAF1-212ENST00000543079 PLCG2P16885 1265 aa14.64□□□□□ -0.07
PAAF1-212ENST00000543079 OCEL1Q9H607 264 aa14.63□□□□□ -0.07
PAAF1-212ENST00000543079 GOLGA2Q08379 1002 aa14.62□□□□□ -0.07
PAAF1-212ENST00000543079 MKRN3Q13064 507 aaKnown RBP14.6□□□□□ -0.07
PAAF1-212ENST00000543079 SCUBE2Q9NQ36 999 aa14.59□□□□□ -0.07
PAAF1-212ENST00000543079 RIOK3O14730 519 aaKnown RBP14.58□□□□□ -0.08
PAAF1-212ENST00000543079 RNF25Q96BH1 459 aaPredicted RBP14.58□□□□□ -0.08
PAAF1-212ENST00000543079 CABP2Q9NPB3 220 aa14.54□□□□□ -0.08
PAAF1-212ENST00000543079 VGFO15240 615 aaPredicted RBP14.52□□□□□ -0.09
PAAF1-212ENST00000543079 PKD2Q13563 968 aa14.52□□□□□ -0.09
PAAF1-212ENST00000543079 ECM2O94769 699 aaPredicted RBP14.5□□□□□ -0.09
PAAF1-212ENST00000543079 PDCD7Q8N8D1 485 aaKnown RBP14.5□□□□□ -0.09
PAAF1-212ENST00000543079 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.5□□□□□ -0.09
PAAF1-212ENST00000543079 ILDR1Q86SU0 546 aaPredicted RBP14.49□□□□□ -0.09
PAAF1-212ENST00000543079 CCDC180Q9P1Z9 1646 aa14.48□□□□□ -0.09
PAAF1-212ENST00000543079 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.46□□□□□ -0.09
PAAF1-212ENST00000543079 ZFP91Q96JP5 570 aaPredicted RBP14.46□□□□□ -0.09
PAAF1-212ENST00000543079 TAOK2Q9UL54 1235 aa14.46□□□□□ -0.09
PAAF1-212ENST00000543079 EFCAB3Q8N7B9 438 aa14.42□□□□□ -0.1
PAAF1-212ENST00000543079 L3MBTL3Q96JM7 780 aaPredicted RBP14.42□□□□□ -0.1
PAAF1-212ENST00000543079 RGL2O15211 777 aa14.37□□□□□ -0.11
PAAF1-212ENST00000543079 SLAIN1Q8ND83 568 aa14.36□□□□□ -0.11
PAAF1-212ENST00000543079 SOX12O15370 315 aa14.35□□□□□ -0.11
PAAF1-212ENST00000543079 DPY19L2Q6NUT2 758 aa14.35□□□□□ -0.11
PAAF1-212ENST00000543079 DNAJC5Q9H3Z4 198 aa14.34□□□□□ -0.11
PAAF1-212ENST00000543079 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.34□□□□□ -0.11
PAAF1-212ENST00000543079 BCL11BQ9C0K0 894 aaPredicted RBP14.33□□□□□ -0.12
PAAF1-212ENST00000543079 STK24Q9Y6E0 443 aa14.29□□□□□ -0.12
PAAF1-212ENST00000543079 STK25O00506 426 aa14.28□□□□□ -0.12
PAAF1-212ENST00000543079 C3orf67Q6ZVT6 689 aa14.28□□□□□ -0.12
PAAF1-212ENST00000543079 BOLA1Q9Y3E2 137 aa14.28□□□□□ -0.12
PAAF1-212ENST00000543079 FAM163AQ96GL9 167 aaPredicted RBP14.27□□□□□ -0.13
PAAF1-212ENST00000543079 G3V3G9 751 aa14.25□□□□□ -0.13
PAAF1-212ENST00000543079 PHF8Q9UPP1 1060 aa14.24□□□□□ -0.13
PAAF1-212ENST00000543079 LCE2DQ5TA82 110 aaPredicted RBP14.22□□□□□ -0.13
PAAF1-212ENST00000543079 TMEM121BQ9BXQ6 578 aaPredicted RBP14.22□□□□□ -0.13
PAAF1-212ENST00000543079 MS4A4AQ96JQ5 239 aa14.21□□□□□ -0.13
PAAF1-212ENST00000543079 NLRP6P59044 892 aa14.2□□□□□ -0.14
PAAF1-212ENST00000543079 RB1CC1Q8TDY2 1594 aa14.19□□□□□ -0.14
PAAF1-212ENST00000543079 POTEMA6NI47 508 aa14.17□□□□□ -0.14
PAAF1-212ENST00000543079 FBXO22Q8NEZ5 403 aa14.17□□□□□ -0.14
PAAF1-212ENST00000543079 SNPHO15079 494 aa14.16□□□□□ -0.14
PAAF1-212ENST00000543079 POTEGQ6S5H5 508 aa14.16□□□□□ -0.14
PAAF1-212ENST00000543079 MFRPQ9BY79 579 aa14.15□□□□□ -0.14
PAAF1-212ENST00000543079 MICALL2Q8IY33 904 aa14.13□□□□□ -0.15
PAAF1-212ENST00000543079 ST18O60284 1047 aa14.1□□□□□ -0.15
PAAF1-212ENST00000543079 HS6ST3Q8IZP7 471 aa14.09□□□□□ -0.15
PAAF1-212ENST00000543079 CHGAP10645 457 aaKnown RBP14.04□□□□□ -0.16
PAAF1-212ENST00000543079 TMEM92Q6UXU6 159 aa14.01□□□□□ -0.17
PAAF1-212ENST00000543079 PCDH10Q9P2E7 1040 aa14□□□□□ -0.17
PAAF1-212ENST00000543079 DCAF8L2P0C7V8 631 aa13.99□□□□□ -0.17
PAAF1-212ENST00000543079 HOXB3P14651 431 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms