RNA–Protein interactions for RNA: ENST00000542810.1

ACSL3-211, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

TSL 2

Gene ACSL3, Length 428 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-211ENST00000542810 PKD2Q13563 968 aa15.2■□□□□ 0.02
ACSL3-211ENST00000542810 TSPYL2Q9H2G4 693 aaPredicted RBP15.19■□□□□ 0.02
ACSL3-211ENST00000542810 CD44P16070 742 aaKnown RBP15.18■□□□□ 0.02
ACSL3-211ENST00000542810 GSE1Q14687 1217 aa15.18■□□□□ 0.02
ACSL3-211ENST00000542810 HAX1O00165 279 aa15.12■□□□□ 0.01
ACSL3-211ENST00000542810 PAK3O75914 559 aaPredicted RBP15.11■□□□□ 0.01
ACSL3-211ENST00000542810 CCDC61Q9Y6R9 512 aa15.11■□□□□ 0.01
ACSL3-211ENST00000542810 ZRANB1Q9UGI0 708 aa15.1■□□□□ 0.01
ACSL3-211ENST00000542810 EVX2Q03828 476 aa15.09■□□□□ 0.01
ACSL3-211ENST00000542810 RB1CC1Q8TDY2 1594 aa15.06■□□□□ 0
ACSL3-211ENST00000542810 ECM2O94769 699 aaPredicted RBP15.05■□□□□ -0
ACSL3-211ENST00000542810 TRIM41Q8WV44 630 aa15.04■□□□□ -0
ACSL3-211ENST00000542810 PYGBP11216 843 aa15.03■□□□□ -0
ACSL3-211ENST00000542810 CHRM1P11229 460 aaPredicted RBP15.01□□□□□ -0.01
ACSL3-211ENST00000542810 ZNF579Q8NAF0 562 aaKnown RBP15□□□□□ -0.01
ACSL3-211ENST00000542810 PHF12Q96QT6 1004 aa15□□□□□ -0.01
ACSL3-211ENST00000542810 NACADO15069 1562 aa14.99□□□□□ -0.01
ACSL3-211ENST00000542810 DCAF8L2P0C7V8 631 aa14.98□□□□□ -0.01
ACSL3-211ENST00000542810 KIF12Q96FN5 646 aa14.95□□□□□ -0.02
ACSL3-211ENST00000542810 RGL2O15211 777 aa14.94□□□□□ -0.02
ACSL3-211ENST00000542810 RNF25Q96BH1 459 aaPredicted RBP14.93□□□□□ -0.02
ACSL3-211ENST00000542810 ZCCHC6Q5VYS8 1495 aaKnown RBP14.93□□□□□ -0.02
ACSL3-211ENST00000542810 MAP3K13O43283 966 aa14.91□□□□□ -0.02
ACSL3-211ENST00000542810 PCDHB13Q9Y5F0 798 aa14.85□□□□□ -0.03
ACSL3-211ENST00000542810 MYO15BQ96JP2 1530 aa14.85□□□□□ -0.03
ACSL3-211ENST00000542810 SGIP1Q9BQI5 828 aa14.84□□□□□ -0.03
ACSL3-211ENST00000542810 RIOK3O14730 519 aaKnown RBP14.83□□□□□ -0.04
ACSL3-211ENST00000542810 PCDHB8Q9UN66 801 aa14.83□□□□□ -0.04
ACSL3-211ENST00000542810 IFNL1Q8IU54 200 aa14.82□□□□□ -0.04
ACSL3-211ENST00000542810 MS4A3Q96HJ5 214 aa14.82□□□□□ -0.04
ACSL3-211ENST00000542810 ZNF467Q7Z7K2 595 aaPredicted RBP14.8□□□□□ -0.04
ACSL3-211ENST00000542810 DCAF1Q9Y4B6 1507 aa14.8□□□□□ -0.04
ACSL3-211ENST00000542810 GALR2O43603 387 aaPredicted RBP14.78□□□□□ -0.04
ACSL3-211ENST00000542810 GABBR2O75899 941 aa14.76□□□□□ -0.05
ACSL3-211ENST00000542810 CLCN6P51797 869 aa14.76□□□□□ -0.05
ACSL3-211ENST00000542810 SP7Q8TDD2 431 aaPredicted RBP14.76□□□□□ -0.05
ACSL3-211ENST00000542810 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
ACSL3-211ENST00000542810 VGFO15240 615 aaPredicted RBP14.73□□□□□ -0.05
ACSL3-211ENST00000542810 TRPC6Q9Y210 931 aa14.73□□□□□ -0.05
ACSL3-211ENST00000542810 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.68□□□□□ -0.06
ACSL3-211ENST00000542810 PDAP1Q13442 181 aaKnown RBP14.68□□□□□ -0.06
ACSL3-211ENST00000542810 ZFP91Q96JP5 570 aaPredicted RBP14.68□□□□□ -0.06
ACSL3-211ENST00000542810 PSEN1P49768 467 aa14.67□□□□□ -0.06
ACSL3-211ENST00000542810 TAOK2Q9UL54 1235 aa14.67□□□□□ -0.06
ACSL3-211ENST00000542810 CHGAP10645 457 aaKnown RBP14.62□□□□□ -0.07
ACSL3-211ENST00000542810 SCRIBQ14160 1630 aa14.62□□□□□ -0.07
ACSL3-211ENST00000542810 TIE1P35590 1138 aa14.6□□□□□ -0.07
ACSL3-211ENST00000542810 HS6ST3Q8IZP7 471 aa14.6□□□□□ -0.07
ACSL3-211ENST00000542810 BMP2KQ9NSY1 1161 aaPredicted RBP14.6□□□□□ -0.07
ACSL3-211ENST00000542810 STK25O00506 426 aa14.59□□□□□ -0.07
ACSL3-211ENST00000542810 TMEM106CQ9BVX2 250 aa14.59□□□□□ -0.07
ACSL3-211ENST00000542810 BCL11BQ9C0K0 894 aaPredicted RBP14.59□□□□□ -0.07
ACSL3-211ENST00000542810 TTLL13PA6NNM8 815 aa14.56□□□□□ -0.08
ACSL3-211ENST00000542810 STK24Q9Y6E0 443 aa14.55□□□□□ -0.08
ACSL3-211ENST00000542810 ATMINO43313 823 aaPredicted RBP14.52□□□□□ -0.09
ACSL3-211ENST00000542810 ASTLQ6HA08 431 aaPredicted RBP14.52□□□□□ -0.09
ACSL3-211ENST00000542810 POTEIP0CG38 1075 aa14.5□□□□□ -0.09
ACSL3-211ENST00000542810 ATN1P54259 1190 aaPredicted RBP14.5□□□□□ -0.09
ACSL3-211ENST00000542810 DNAJC5Q9H3Z4 198 aa14.5□□□□□ -0.09
ACSL3-211ENST00000542810 BICRAQ9NZM4 1560 aa14.5□□□□□ -0.09
ACSL3-211ENST00000542810 DCBLD2Q96PD2 775 aa14.49□□□□□ -0.09
ACSL3-211ENST00000542810 CABP2Q9NPB3 220 aa14.48□□□□□ -0.09
ACSL3-211ENST00000542810 TRIM35Q9UPQ4 493 aa14.46□□□□□ -0.09
ACSL3-211ENST00000542810 BBXQ8WY36 941 aaPredicted RBP14.45□□□□□ -0.1
ACSL3-211ENST00000542810 NKX1-1Q15270 411 aaPredicted RBP14.43□□□□□ -0.1
ACSL3-211ENST00000542810 PELP1Q8IZL8 1130 aaKnown RBP14.43□□□□□ -0.1
ACSL3-211ENST00000542810 EFCAB3Q8N7B9 438 aa14.42□□□□□ -0.1
ACSL3-211ENST00000542810 SHROOM4Q9ULL8 1493 aa14.41□□□□□ -0.1
ACSL3-211ENST00000542810 GOLGA2Q08379 1002 aa14.37□□□□□ -0.11
ACSL3-211ENST00000542810 MKRN3Q13064 507 aaKnown RBP14.35□□□□□ -0.11
ACSL3-211ENST00000542810 MFRPQ9BY79 579 aa14.33□□□□□ -0.12
ACSL3-211ENST00000542810 SOX12O15370 315 aa14.32□□□□□ -0.12
ACSL3-211ENST00000542810 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.32□□□□□ -0.12
ACSL3-211ENST00000542810 IER5LQ5T953 404 aa14.31□□□□□ -0.12
ACSL3-211ENST00000542810 PHF8Q9UPP1 1060 aa14.31□□□□□ -0.12
ACSL3-211ENST00000542810 GTPBP6O43824 516 aaPredicted RBP14.29□□□□□ -0.12
ACSL3-211ENST00000542810 ILDR1Q86SU0 546 aaPredicted RBP14.29□□□□□ -0.12
ACSL3-211ENST00000542810 FBXO22Q8NEZ5 403 aa14.29□□□□□ -0.12
ACSL3-211ENST00000542810 IRX5P78411 483 aaPredicted RBP14.28□□□□□ -0.12
ACSL3-211ENST00000542810 SLC39A7Q92504 469 aa14.28□□□□□ -0.12
ACSL3-211ENST00000542810 NLRP6P59044 892 aa14.26□□□□□ -0.13
ACSL3-211ENST00000542810 MS4A4AQ96JQ5 239 aa14.26□□□□□ -0.13
ACSL3-211ENST00000542810 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.26□□□□□ -0.13
ACSL3-211ENST00000542810 C7P10643 843 aa14.25□□□□□ -0.13
ACSL3-211ENST00000542810 PAXIP1Q6ZW49 1069 aaPredicted RBP14.25□□□□□ -0.13
ACSL3-211ENST00000542810 METRNQ9UJH8 293 aa14.25□□□□□ -0.13
ACSL3-211ENST00000542810 SPRYD3Q8NCJ5 442 aa14.24□□□□□ -0.13
ACSL3-211ENST00000542810 POTEFA5A3E0 1075 aa14.23□□□□□ -0.13
ACSL3-211ENST00000542810 COLQQ9Y215 455 aaPredicted RBP14.23□□□□□ -0.13
ACSL3-211ENST00000542810 PLCB2Q00722 1185 aa14.22□□□□□ -0.13
ACSL3-211ENST00000542810 PDCD7Q8N8D1 485 aaKnown RBP14.22□□□□□ -0.13
ACSL3-211ENST00000542810 CFAP44Q96MT7 982 aa14.22□□□□□ -0.13
ACSL3-211ENST00000542810 OCEL1Q9H607 264 aa14.21□□□□□ -0.13
ACSL3-211ENST00000542810 RYDENQ9NUL5 291 aaKnown RBP14.19□□□□□ -0.14
ACSL3-211ENST00000542810 EIF4G1Q04637 1599 aaKnown RBP14.17□□□□□ -0.14
ACSL3-211ENST00000542810 PLCG2P16885 1265 aa14.17□□□□□ -0.14
ACSL3-211ENST00000542810 DPY19L2Q6NUT2 758 aa14.17□□□□□ -0.14
ACSL3-211ENST00000542810 PPP1R37O75864 691 aa14.16□□□□□ -0.14
ACSL3-211ENST00000542810 SEC24BO95487 1268 aa14.16□□□□□ -0.14
ACSL3-211ENST00000542810 CC2D2AQ9P2K1 1620 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms