RNA–Protein interactions for RNA: ENST00000542800.1

C1orf53-203, Transcript of chromosome 1 open reading frame 53, humanhuman

TSL 3

Gene C1orf53, Length 341 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf53-203ENST00000542800 SPDYE4A6NLX3 237 aa10.83□□□□□ -0.68
C1orf53-203ENST00000542800 MNX1P50219 401 aaPredicted RBP10.82□□□□□ -0.68
C1orf53-203ENST00000542800 ATMINO43313 823 aaPredicted RBP10.81□□□□□ -0.68
C1orf53-203ENST00000542800 MS4A3Q96HJ5 214 aa10.81□□□□□ -0.68
C1orf53-203ENST00000542800 POTEJP0CG39 1038 aa10.77□□□□□ -0.69
C1orf53-203ENST00000542800 SCUBE2Q9NQ36 999 aa10.75□□□□□ -0.69
C1orf53-203ENST00000542800 LCE2DQ5TA82 110 aaPredicted RBP10.71□□□□□ -0.69
C1orf53-203ENST00000542800 CSRNP3Q8WYN3 585 aa10.71□□□□□ -0.69
C1orf53-203ENST00000542800 FAM163AQ96GL9 167 aaPredicted RBP10.7□□□□□ -0.7
C1orf53-203ENST00000542800 ATN1P54259 1190 aaPredicted RBP10.68□□□□□ -0.7
C1orf53-203ENST00000542800 TSPYL2Q9H2G4 693 aaPredicted RBP10.65□□□□□ -0.7
C1orf53-203ENST00000542800 CCDC61Q9Y6R9 512 aa10.64□□□□□ -0.71
C1orf53-203ENST00000542800 KIF12Q96FN5 646 aa10.6□□□□□ -0.71
C1orf53-203ENST00000542800 BMP2KQ9NSY1 1161 aaPredicted RBP10.59□□□□□ -0.71
C1orf53-203ENST00000542800 POTEFA5A3E0 1075 aa10.58□□□□□ -0.72
C1orf53-203ENST00000542800 TIE1P35590 1138 aa10.58□□□□□ -0.72
C1orf53-203ENST00000542800 TRPC6Q9Y210 931 aa10.52□□□□□ -0.73
C1orf53-203ENST00000542800 SEC24BO95487 1268 aa10.51□□□□□ -0.73
C1orf53-203ENST00000542800 CDAN1Q8IWY9 1227 aa10.51□□□□□ -0.73
C1orf53-203ENST00000542800 MAP3K13O43283 966 aa10.5□□□□□ -0.73
C1orf53-203ENST00000542800 PROM2Q8N271 834 aa10.49□□□□□ -0.73
C1orf53-203ENST00000542800 PLEKHG5O94827 1062 aa10.48□□□□□ -0.73
C1orf53-203ENST00000542800 TTLL13PA6NNM8 815 aa10.47□□□□□ -0.73
C1orf53-203ENST00000542800 COLQQ9Y215 455 aaPredicted RBP10.47□□□□□ -0.73
C1orf53-203ENST00000542800 IER5LQ5T953 404 aa10.46□□□□□ -0.73
C1orf53-203ENST00000542800 RASEFQ8IZ41 740 aa10.42□□□□□ -0.74
C1orf53-203ENST00000542800 SGIP1Q9BQI5 828 aa10.41□□□□□ -0.74
C1orf53-203ENST00000542800 TRIM35Q9UPQ4 493 aa10.41□□□□□ -0.74
C1orf53-203ENST00000542800 SLAIN1Q8ND83 568 aa10.39□□□□□ -0.75
C1orf53-203ENST00000542800 MIER1Q8N108 512 aa10.38□□□□□ -0.75
C1orf53-203ENST00000542800 ST18O60284 1047 aa10.37□□□□□ -0.75
C1orf53-203ENST00000542800 PCDHB13Q9Y5F0 798 aa10.36□□□□□ -0.75
C1orf53-203ENST00000542800 EHMT2Q96KQ7 1210 aa10.32□□□□□ -0.76
C1orf53-203ENST00000542800 PLCG2P16885 1265 aa10.31□□□□□ -0.76
C1orf53-203ENST00000542800 MMRN1Q13201 1228 aa10.29□□□□□ -0.76
C1orf53-203ENST00000542800 TMEM121BQ9BXQ6 578 aaPredicted RBP10.29□□□□□ -0.76
C1orf53-203ENST00000542800 TMEM106CQ9BVX2 250 aa10.27□□□□□ -0.77
C1orf53-203ENST00000542800 ZBTB47Q9UFB7 747 aaPredicted RBP10.27□□□□□ -0.77
C1orf53-203ENST00000542800 IFNL1Q8IU54 200 aa10.26□□□□□ -0.77
C1orf53-203ENST00000542800 SPNS2Q8IVW8 549 aa10.26□□□□□ -0.77
C1orf53-203ENST00000542800 SNPHO15079 494 aa10.25□□□□□ -0.77
C1orf53-203ENST00000542800 PLCD3Q8N3E9 789 aa10.25□□□□□ -0.77
C1orf53-203ENST00000542800 IRX5P78411 483 aaPredicted RBP10.24□□□□□ -0.77
C1orf53-203ENST00000542800 NUBP1P53384 320 aa10.22□□□□□ -0.77
C1orf53-203ENST00000542800 FAM212AQ96EL1 285 aa10.21□□□□□ -0.77
C1orf53-203ENST00000542800 OCEL1Q9H607 264 aa10.19□□□□□ -0.78
C1orf53-203ENST00000542800 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.18□□□□□ -0.78
C1orf53-203ENST00000542800 MARVELD3Q96A59 401 aa10.14□□□□□ -0.79
C1orf53-203ENST00000542800 EMP3P54852 163 aa10.07□□□□□ -0.8
C1orf53-203ENST00000542800 C3orf67Q6ZVT6 689 aa10.05□□□□□ -0.8
C1orf53-203ENST00000542800 PYGBP11216 843 aa10.02□□□□□ -0.81
C1orf53-203ENST00000542800 DCAF8Q5TAQ9 597 aa10.02□□□□□ -0.81
C1orf53-203ENST00000542800 L3MBTL3Q96JM7 780 aaPredicted RBP10.01□□□□□ -0.81
C1orf53-203ENST00000542800 HS3ST6Q96QI5 342 aa10.01□□□□□ -0.81
C1orf53-203ENST00000542800 PDCD7Q8N8D1 485 aaKnown RBP10□□□□□ -0.81
C1orf53-203ENST00000542800 KRTAP3-3Q9BYR6 98 aa10□□□□□ -0.81
C1orf53-203ENST00000542800 KRTAP3-2Q9BYR7 98 aa10□□□□□ -0.81
C1orf53-203ENST00000542800 PCDHB8Q9UN66 801 aa10□□□□□ -0.81
C1orf53-203ENST00000542800 FAM205CA6NFA0 338 aa9.97□□□□□ -0.81
C1orf53-203ENST00000542800 GOLGA2Q08379 1002 aa9.97□□□□□ -0.81
C1orf53-203ENST00000542800 MKRN3Q13064 507 aaKnown RBP9.96□□□□□ -0.82
C1orf53-203ENST00000542800 POTEB3A0JP26 581 aa9.94□□□□□ -0.82
C1orf53-203ENST00000542800 POTEBQ6S5H4 581 aa9.94□□□□□ -0.82
C1orf53-203ENST00000542800 ZNF467Q7Z7K2 595 aaPredicted RBP9.94□□□□□ -0.82
C1orf53-203ENST00000542800 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.9□□□□□ -0.82
C1orf53-203ENST00000542800 GSE1Q14687 1217 aa9.86□□□□□ -0.83
C1orf53-203ENST00000542800 NISCHQ9Y2I1 1504 aa9.86□□□□□ -0.83
C1orf53-203ENST00000542800 ILDR1Q86SU0 546 aaPredicted RBP9.83□□□□□ -0.84
C1orf53-203ENST00000542800 G3V3G9 751 aa9.82□□□□□ -0.84
C1orf53-203ENST00000542800 PSEN1P49768 467 aa9.82□□□□□ -0.84
C1orf53-203ENST00000542800 CHRM1P11229 460 aaPredicted RBP9.81□□□□□ -0.84
C1orf53-203ENST00000542800 HOXB3P14651 431 aaPredicted RBP9.8□□□□□ -0.84
C1orf53-203ENST00000542800 HOXB1P14653 301 aaPredicted RBP9.8□□□□□ -0.84
C1orf53-203ENST00000542800 ZNF710Q8N1W2 664 aa9.8□□□□□ -0.84
C1orf53-203ENST00000542800 RNF166Q96A37 237 aaPredicted RBP9.8□□□□□ -0.84
C1orf53-203ENST00000542800 FBXO3Q9UK99 471 aa9.79□□□□□ -0.84
C1orf53-203ENST00000542800 FKBP8Q14318 412 aa9.78□□□□□ -0.84
C1orf53-203ENST00000542800 BOLA1Q9Y3E2 137 aa9.78□□□□□ -0.84
C1orf53-203ENST00000542800 ERBB3P21860 1342 aa9.78□□□□□ -0.84
C1orf53-203ENST00000542800 DOK7Q18PE1 504 aa9.77□□□□□ -0.85
C1orf53-203ENST00000542800 PDAP1Q13442 181 aaKnown RBP9.75□□□□□ -0.85
C1orf53-203ENST00000542800 DPY19L2Q6NUT2 758 aa9.75□□□□□ -0.85
C1orf53-203ENST00000542800 KLHL34Q8N239 644 aa9.74□□□□□ -0.85
C1orf53-203ENST00000542800 RIMBP2O15034 1052 aa9.72□□□□□ -0.85
C1orf53-203ENST00000542800 MYT1LQ9UL68 1186 aa9.72□□□□□ -0.85
C1orf53-203ENST00000542800 CABP2Q9NPB3 220 aa9.7□□□□□ -0.86
C1orf53-203ENST00000542800 VARS2Q5ST30 1063 aaKnown RBP9.69□□□□□ -0.86
C1orf53-203ENST00000542800 PTGER2P43116 358 aa9.67□□□□□ -0.86
C1orf53-203ENST00000542800 ZNF687Q8N1G0 1237 aa9.65□□□□□ -0.86
C1orf53-203ENST00000542800 ZSWIM6Q9HCJ5 1215 aa9.65□□□□□ -0.86
C1orf53-203ENST00000542800 VASPP50552 380 aaPredicted RBP9.64□□□□□ -0.87
C1orf53-203ENST00000542800 GPR153Q6NV75 609 aa9.55□□□□□ -0.88
C1orf53-203ENST00000542800 CIZ1Q9ULV3 898 aaPredicted RBP9.54□□□□□ -0.88
C1orf53-203ENST00000542800 MICALL2Q8IY33 904 aa9.53□□□□□ -0.88
C1orf53-203ENST00000542800 TMEM92Q6UXU6 159 aa9.52□□□□□ -0.89
C1orf53-203ENST00000542800 EFCAB3Q8N7B9 438 aa9.52□□□□□ -0.89
C1orf53-203ENST00000542800 ANKRD13DQ6ZTN6 518 aa9.51□□□□□ -0.89
C1orf53-203ENST00000542800 SPOCK2Q92563 424 aa9.51□□□□□ -0.89
C1orf53-203ENST00000542800 ZNF316A6NFI3 1004 aaPredicted RBP9.46□□□□□ -0.9
C1orf53-203ENST00000542800 LSM11P83369 360 aaKnown RBP eCLIP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms