RNA–Protein interactions for RNA: ENST00000542705.1

CD163-211, Transcript of CD163 molecule, humanhuman

TSL 3

Gene CD163, Length 496 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD163-211ENST00000542705 PCDH10Q9P2E7 1040 aa12.63□□□□□ -0.39
CD163-211ENST00000542705 ATMINO43313 823 aaPredicted RBP12.6□□□□□ -0.39
CD163-211ENST00000542705 MS4A3Q96HJ5 214 aa12.6□□□□□ -0.39
CD163-211ENST00000542705 STAG3Q9UJ98 1225 aa12.6□□□□□ -0.39
CD163-211ENST00000542705 PAK3O75914 559 aaPredicted RBP12.59□□□□□ -0.39
CD163-211ENST00000542705 FKBP8Q14318 412 aa12.59□□□□□ -0.39
CD163-211ENST00000542705 C7P10643 843 aa12.54□□□□□ -0.4
CD163-211ENST00000542705 SLC39A7Q92504 469 aa12.54□□□□□ -0.4
CD163-211ENST00000542705 FAM163AQ96GL9 167 aaPredicted RBP12.51□□□□□ -0.41
CD163-211ENST00000542705 POTEFA5A3E0 1075 aa12.48□□□□□ -0.41
CD163-211ENST00000542705 NPM1P06748 294 aaKnown RBP eCLIP12.47□□□□□ -0.41
CD163-211ENST00000542705 MAMSTRQ6ZN01 415 aa12.47□□□□□ -0.41
CD163-211ENST00000542705 ATN1P54259 1190 aaPredicted RBP12.46□□□□□ -0.41
CD163-211ENST00000542705 SCUBE2Q9NQ36 999 aa12.39□□□□□ -0.43
CD163-211ENST00000542705 TRPC6Q9Y210 931 aa12.38□□□□□ -0.43
CD163-211ENST00000542705 CCDC61Q9Y6R9 512 aa12.36□□□□□ -0.43
CD163-211ENST00000542705 BMP2KQ9NSY1 1161 aaPredicted RBP12.34□□□□□ -0.43
CD163-211ENST00000542705 TSPYL2Q9H2G4 693 aaPredicted RBP12.33□□□□□ -0.44
CD163-211ENST00000542705 KIF12Q96FN5 646 aa12.32□□□□□ -0.44
CD163-211ENST00000542705 CDAN1Q8IWY9 1227 aa12.3□□□□□ -0.44
CD163-211ENST00000542705 COLQQ9Y215 455 aaPredicted RBP12.29□□□□□ -0.44
CD163-211ENST00000542705 MIER1Q8N108 512 aa12.22□□□□□ -0.45
CD163-211ENST00000542705 MAP3K13O43283 966 aa12.21□□□□□ -0.45
CD163-211ENST00000542705 TIE1P35590 1138 aa12.19□□□□□ -0.46
CD163-211ENST00000542705 TTLL13PA6NNM8 815 aa12.17□□□□□ -0.46
CD163-211ENST00000542705 PLCD3Q8N3E9 789 aa12.16□□□□□ -0.46
CD163-211ENST00000542705 FBXO3Q9UK99 471 aa12.16□□□□□ -0.46
CD163-211ENST00000542705 ST18O60284 1047 aa12.15□□□□□ -0.46
CD163-211ENST00000542705 RASEFQ8IZ41 740 aa12.12□□□□□ -0.47
CD163-211ENST00000542705 PLEKHG5O94827 1062 aa12.11□□□□□ -0.47
CD163-211ENST00000542705 SEC24BO95487 1268 aa12.11□□□□□ -0.47
CD163-211ENST00000542705 VASPP50552 380 aaPredicted RBP12.07□□□□□ -0.48
CD163-211ENST00000542705 MMRN1Q13201 1228 aa12.07□□□□□ -0.48
CD163-211ENST00000542705 TRIM35Q9UPQ4 493 aa12.07□□□□□ -0.48
CD163-211ENST00000542705 SLAIN1Q8ND83 568 aa12.06□□□□□ -0.48
CD163-211ENST00000542705 SPNS2Q8IVW8 549 aa12.04□□□□□ -0.48
CD163-211ENST00000542705 IER5LQ5T953 404 aa12.03□□□□□ -0.48
CD163-211ENST00000542705 NUBP1P53384 320 aa12□□□□□ -0.49
CD163-211ENST00000542705 ZBTB47Q9UFB7 747 aaPredicted RBP12□□□□□ -0.49
CD163-211ENST00000542705 PCDHB13Q9Y5F0 798 aa11.94□□□□□ -0.5
CD163-211ENST00000542705 SGIP1Q9BQI5 828 aa11.93□□□□□ -0.5
CD163-211ENST00000542705 IFNL1Q8IU54 200 aa11.92□□□□□ -0.5
CD163-211ENST00000542705 IFNLR1Q8IU57 520 aaPredicted RBP11.91□□□□□ -0.5
CD163-211ENST00000542705 IRX5P78411 483 aaPredicted RBP11.9□□□□□ -0.5
CD163-211ENST00000542705 KLHL34Q8N239 644 aa11.89□□□□□ -0.51
CD163-211ENST00000542705 MARVELD3Q96A59 401 aa11.88□□□□□ -0.51
CD163-211ENST00000542705 TMEM106CQ9BVX2 250 aa11.87□□□□□ -0.51
CD163-211ENST00000542705 TMEM121BQ9BXQ6 578 aaPredicted RBP11.86□□□□□ -0.51
CD163-211ENST00000542705 PLCG2P16885 1265 aa11.85□□□□□ -0.51
CD163-211ENST00000542705 AMER1Q5JTC6 1135 aaPredicted RBP11.85□□□□□ -0.51
CD163-211ENST00000542705 FAM212AQ96EL1 285 aa11.85□□□□□ -0.51
CD163-211ENST00000542705 POTEB3A0JP26 581 aa11.79□□□□□ -0.52
CD163-211ENST00000542705 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
CD163-211ENST00000542705 POTEBQ6S5H4 581 aa11.79□□□□□ -0.52
CD163-211ENST00000542705 SPOCK2Q92563 424 aa11.77□□□□□ -0.53
CD163-211ENST00000542705 KRTAP3-3Q9BYR6 98 aa11.76□□□□□ -0.53
CD163-211ENST00000542705 KRTAP3-2Q9BYR7 98 aa11.76□□□□□ -0.53
CD163-211ENST00000542705 OCEL1Q9H607 264 aa11.76□□□□□ -0.53
CD163-211ENST00000542705 PYGBP11216 843 aa11.73□□□□□ -0.53
CD163-211ENST00000542705 RTN4Q9NQC3 1192 aaKnown RBP11.73□□□□□ -0.53
CD163-211ENST00000542705 SNPHO15079 494 aa11.72□□□□□ -0.53
CD163-211ENST00000542705 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.71□□□□□ -0.53
CD163-211ENST00000542705 GSE1Q14687 1217 aa11.7□□□□□ -0.54
CD163-211ENST00000542705 EMP3P54852 163 aa11.66□□□□□ -0.54
CD163-211ENST00000542705 PDCD7Q8N8D1 485 aaKnown RBP11.65□□□□□ -0.54
CD163-211ENST00000542705 HS3ST6Q96QI5 342 aa11.65□□□□□ -0.54
CD163-211ENST00000542705 CIZ1Q9ULV3 898 aaPredicted RBP11.64□□□□□ -0.55
CD163-211ENST00000542705 PCDHB8Q9UN66 801 aa11.62□□□□□ -0.55
CD163-211ENST00000542705 FAM205CA6NFA0 338 aa11.61□□□□□ -0.55
CD163-211ENST00000542705 CHRM1P11229 460 aaPredicted RBP11.6□□□□□ -0.55
CD163-211ENST00000542705 C3orf67Q6ZVT6 689 aa11.52□□□□□ -0.57
CD163-211ENST00000542705 ZNF467Q7Z7K2 595 aaPredicted RBP11.52□□□□□ -0.57
CD163-211ENST00000542705 HOXB3P14651 431 aaPredicted RBP11.46□□□□□ -0.57
CD163-211ENST00000542705 TRIM41Q8WV44 630 aa11.46□□□□□ -0.57
CD163-211ENST00000542705 L3MBTL3Q96JM7 780 aaPredicted RBP11.45□□□□□ -0.58
CD163-211ENST00000542705 PSEN1P49768 467 aa11.44□□□□□ -0.58
CD163-211ENST00000542705 RNF25Q96BH1 459 aaPredicted RBP11.44□□□□□ -0.58
CD163-211ENST00000542705 PDAP1Q13442 181 aaKnown RBP11.42□□□□□ -0.58
CD163-211ENST00000542705 DPY19L2Q6NUT2 758 aa11.42□□□□□ -0.58
CD163-211ENST00000542705 ILDR1Q86SU0 546 aaPredicted RBP11.42□□□□□ -0.58
CD163-211ENST00000542705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.41□□□□□ -0.58
CD163-211ENST00000542705 MKRN3Q13064 507 aaKnown RBP11.39□□□□□ -0.59
CD163-211ENST00000542705 PKD2Q13563 968 aa11.39□□□□□ -0.59
CD163-211ENST00000542705 RNF166Q96A37 237 aaPredicted RBP11.37□□□□□ -0.59
CD163-211ENST00000542705 RIOK3O14730 519 aaKnown RBP11.35□□□□□ -0.59
CD163-211ENST00000542705 HOXB1P14653 301 aaPredicted RBP11.35□□□□□ -0.59
CD163-211ENST00000542705 GOLGA2Q08379 1002 aa11.33□□□□□ -0.6
CD163-211ENST00000542705 ECM2O94769 699 aaPredicted RBP11.32□□□□□ -0.6
CD163-211ENST00000542705 CABP2Q9NPB3 220 aa11.31□□□□□ -0.6
CD163-211ENST00000542705 ERBB3P21860 1342 aa11.29□□□□□ -0.6
CD163-211ENST00000542705 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.28□□□□□ -0.6
CD163-211ENST00000542705 RGL2O15211 777 aa11.28□□□□□ -0.6
CD163-211ENST00000542705 ZFP91Q96JP5 570 aaPredicted RBP11.28□□□□□ -0.6
CD163-211ENST00000542705 VGFO15240 615 aaPredicted RBP11.27□□□□□ -0.61
CD163-211ENST00000542705 MYT1LQ9UL68 1186 aa11.27□□□□□ -0.61
CD163-211ENST00000542705 BOLA1Q9Y3E2 137 aa11.26□□□□□ -0.61
CD163-211ENST00000542705 VARS2Q5ST30 1063 aaKnown RBP11.25□□□□□ -0.61
CD163-211ENST00000542705 ZNF710Q8N1W2 664 aa11.23□□□□□ -0.61
CD163-211ENST00000542705 EFCAB3Q8N7B9 438 aa11.22□□□□□ -0.61
CD163-211ENST00000542705 DOK7Q18PE1 504 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms