RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 CECR2Q9BXF3 1484 aa16.69■□□□□ 0.26
CLPB-211ENST00000542555 SHROOM4Q9ULL8 1493 aa16.68■□□□□ 0.26
CLPB-211ENST00000542555 CC2D2AQ9P2K1 1620 aa16.63■□□□□ 0.25
CLPB-211ENST00000542555 MNX1P50219 401 aaPredicted RBP16.62■□□□□ 0.25
CLPB-211ENST00000542555 DNAJC5Q9H3Z4 198 aa16.51■□□□□ 0.23
CLPB-211ENST00000542555 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
CLPB-211ENST00000542555 OTUD5Q96G74 571 aa16.48■□□□□ 0.23
CLPB-211ENST00000542555 TSPYL2Q9H2G4 693 aaPredicted RBP16.48■□□□□ 0.23
CLPB-211ENST00000542555 DCAF1Q9Y4B6 1507 aa16.48■□□□□ 0.23
CLPB-211ENST00000542555 SCRIBQ14160 1630 aa16.46■□□□□ 0.23
CLPB-211ENST00000542555 MS4A3Q96HJ5 214 aa16.46■□□□□ 0.23
CLPB-211ENST00000542555 PLEKHG5O94827 1062 aa16.45■□□□□ 0.22
CLPB-211ENST00000542555 ZCCHC6Q5VYS8 1495 aaKnown RBP16.45■□□□□ 0.22
CLPB-211ENST00000542555 POTEB2H3BUK9 544 aa16.44■□□□□ 0.22
CLPB-211ENST00000542555 PELP1Q8IZL8 1130 aaKnown RBP16.43■□□□□ 0.22
CLPB-211ENST00000542555 PROM2Q8N271 834 aa16.43■□□□□ 0.22
CLPB-211ENST00000542555 PLSCR2Q9NRY7 297 aa16.42■□□□□ 0.22
CLPB-211ENST00000542555 ASTLQ6HA08 431 aaPredicted RBP16.4■□□□□ 0.22
CLPB-211ENST00000542555 SLC39A7Q92504 469 aa16.39■□□□□ 0.21
CLPB-211ENST00000542555 METRNQ9UJH8 293 aa16.39■□□□□ 0.21
CLPB-211ENST00000542555 ATMINO43313 823 aaPredicted RBP16.37■□□□□ 0.21
CLPB-211ENST00000542555 C7P10643 843 aa16.37■□□□□ 0.21
CLPB-211ENST00000542555 MIER1Q8N108 512 aa16.35■□□□□ 0.21
CLPB-211ENST00000542555 CCDC61Q9Y6R9 512 aa16.32■□□□□ 0.2
CLPB-211ENST00000542555 MAMSTRQ6ZN01 415 aa16.26■□□□□ 0.19
CLPB-211ENST00000542555 KIF12Q96FN5 646 aa16.26■□□□□ 0.19
CLPB-211ENST00000542555 POTEMA6NI47 508 aa16.22■□□□□ 0.19
CLPB-211ENST00000542555 ATN1P54259 1190 aaPredicted RBP16.22■□□□□ 0.19
CLPB-211ENST00000542555 PLCD3Q8N3E9 789 aa16.2■□□□□ 0.18
CLPB-211ENST00000542555 POTEGQ6S5H5 508 aa16.17■□□□□ 0.18
CLPB-211ENST00000542555 SCUBE2Q9NQ36 999 aa16.17■□□□□ 0.18
CLPB-211ENST00000542555 MAP3K13O43283 966 aa16.16■□□□□ 0.18
CLPB-211ENST00000542555 RASEFQ8IZ41 740 aa16.16■□□□□ 0.18
CLPB-211ENST00000542555 BMP2KQ9NSY1 1161 aaPredicted RBP16.15■□□□□ 0.18
CLPB-211ENST00000542555 POTEJP0CG39 1038 aa16.13■□□□□ 0.17
CLPB-211ENST00000542555 TIE1P35590 1138 aa16.12■□□□□ 0.17
CLPB-211ENST00000542555 ZBTB47Q9UFB7 747 aaPredicted RBP16.11■□□□□ 0.17
CLPB-211ENST00000542555 CUX2O14529 1486 aa16.1■□□□□ 0.17
CLPB-211ENST00000542555 TRPC6Q9Y210 931 aa16.09■□□□□ 0.17
CLPB-211ENST00000542555 ERCC6Q03468 1493 aa16.07■□□□□ 0.16
CLPB-211ENST00000542555 SEC24BO95487 1268 aa16.05■□□□□ 0.16
CLPB-211ENST00000542555 FAM163AQ96GL9 167 aaPredicted RBP16.03■□□□□ 0.16
CLPB-211ENST00000542555 TTLL13PA6NNM8 815 aa16.01■□□□□ 0.15
CLPB-211ENST00000542555 PCDH10Q9P2E7 1040 aa16.01■□□□□ 0.15
CLPB-211ENST00000542555 PCDHB13Q9Y5F0 798 aa16.01■□□□□ 0.15
CLPB-211ENST00000542555 SGIP1Q9BQI5 828 aa15.99■□□□□ 0.15
CLPB-211ENST00000542555 POTEFA5A3E0 1075 aa15.98■□□□□ 0.15
CLPB-211ENST00000542555 FAM212AQ96EL1 285 aa15.94■□□□□ 0.14
CLPB-211ENST00000542555 TRIM35Q9UPQ4 493 aa15.94■□□□□ 0.14
CLPB-211ENST00000542555 NUBP1P53384 320 aa15.92■□□□□ 0.14
CLPB-211ENST00000542555 COLQQ9Y215 455 aaPredicted RBP15.92■□□□□ 0.14
CLPB-211ENST00000542555 IER5LQ5T953 404 aa15.91■□□□□ 0.14
CLPB-211ENST00000542555 NCAPD3P42695 1498 aa15.89■□□□□ 0.13
CLPB-211ENST00000542555 FKBP8Q14318 412 aa15.88■□□□□ 0.13
CLPB-211ENST00000542555 IFNL1Q8IU54 200 aa15.86■□□□□ 0.13
CLPB-211ENST00000542555 LCE2DQ5TA82 110 aaPredicted RBP15.83■□□□□ 0.12
CLPB-211ENST00000542555 TMEM106CQ9BVX2 250 aa15.83■□□□□ 0.12
CLPB-211ENST00000542555 PLCG2P16885 1265 aa15.78■□□□□ 0.12
CLPB-211ENST00000542555 DCAF8Q5TAQ9 597 aa15.78■□□□□ 0.12
CLPB-211ENST00000542555 ATAD2BQ9ULI0 1458 aa15.78■□□□□ 0.12
CLPB-211ENST00000542555 SMARCA2P51531 1590 aa15.77■□□□□ 0.11
CLPB-211ENST00000542555 SLAIN1Q8ND83 568 aa15.74■□□□□ 0.11
CLPB-211ENST00000542555 HMGXB3Q12766 1538 aa15.72■□□□□ 0.11
CLPB-211ENST00000542555 TRIM41Q8WV44 630 aa15.71■□□□□ 0.11
CLPB-211ENST00000542555 FBXO3Q9UK99 471 aa15.71■□□□□ 0.11
CLPB-211ENST00000542555 NESP48681 1621 aa15.7■□□□□ 0.1
CLPB-211ENST00000542555 PYGBP11216 843 aa15.69■□□□□ 0.1
CLPB-211ENST00000542555 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
CLPB-211ENST00000542555 SMARCA4P51532 1647 aa15.65■□□□□ 0.1
CLPB-211ENST00000542555 IRX5P78411 483 aaPredicted RBP15.63■□□□□ 0.09
CLPB-211ENST00000542555 OCEL1Q9H607 264 aa15.63■□□□□ 0.09
CLPB-211ENST00000542555 CDAN1Q8IWY9 1227 aa15.61■□□□□ 0.09
CLPB-211ENST00000542555 LAMC3Q9Y6N6 1575 aa15.61■□□□□ 0.09
CLPB-211ENST00000542555 PDS5BQ9NTI5 1447 aa15.6■□□□□ 0.09
CLPB-211ENST00000542555 THOC2Q8NI27 1593 aaKnown RBP15.59■□□□□ 0.09
CLPB-211ENST00000542555 KLHL34Q8N239 644 aa15.59■□□□□ 0.09
CLPB-211ENST00000542555 BAZ1AQ9NRL2 1556 aaPredicted RBP15.58■□□□□ 0.09
CLPB-211ENST00000542555 PCDHB8Q9UN66 801 aa15.58■□□□□ 0.08
CLPB-211ENST00000542555 ST18O60284 1047 aa15.57■□□□□ 0.08
CLPB-211ENST00000542555 GSE1Q14687 1217 aa15.53■□□□□ 0.08
CLPB-211ENST00000542555 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.53■□□□□ 0.08
CLPB-211ENST00000542555 GOLGA2Q08379 1002 aa15.51■□□□□ 0.07
CLPB-211ENST00000542555 SNPHO15079 494 aa15.5■□□□□ 0.07
CLPB-211ENST00000542555 ZNF467Q7Z7K2 595 aaPredicted RBP15.49■□□□□ 0.07
CLPB-211ENST00000542555 KIF21AQ7Z4S6 1674 aa15.48■□□□□ 0.07
CLPB-211ENST00000542555 PEG3Q9GZU2 1588 aa15.47■□□□□ 0.07
CLPB-211ENST00000542555 VASPP50552 380 aaPredicted RBP15.45■□□□□ 0.06
CLPB-211ENST00000542555 MKRN3Q13064 507 aaKnown RBP15.45■□□□□ 0.06
CLPB-211ENST00000542555 TMEM121BQ9BXQ6 578 aaPredicted RBP15.44■□□□□ 0.06
CLPB-211ENST00000542555 MRC2Q9UBG0 1479 aa15.43■□□□□ 0.06
CLPB-211ENST00000542555 CADPSQ9ULU8 1353 aa15.42■□□□□ 0.06
CLPB-211ENST00000542555 C3orf67Q6ZVT6 689 aa15.41■□□□□ 0.06
CLPB-211ENST00000542555 L3MBTL3Q96JM7 780 aaPredicted RBP15.38■□□□□ 0.05
CLPB-211ENST00000542555 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
CLPB-211ENST00000542555 CHRM1P11229 460 aaPredicted RBP15.35■□□□□ 0.05
CLPB-211ENST00000542555 WDR62O43379 1518 aa15.34■□□□□ 0.05
CLPB-211ENST00000542555 PSEN1P49768 467 aa15.34■□□□□ 0.05
CLPB-211ENST00000542555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.34■□□□□ 0.05
CLPB-211ENST00000542555 PDCD7Q8N8D1 485 aaKnown RBP15.33■□□□□ 0.04
CLPB-211ENST00000542555 MARVELD3Q96A59 401 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms