RNA–Protein interactions for RNA: ENST00000542224.1

LMNTD1-209, Transcript of lamin tail domain containing 1, humanhuman

TSL 5

Gene LMNTD1, Length 525 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-209ENST00000542224 SLC39A7Q92504 469 aa9.7□□□□□ -0.86
LMNTD1-209ENST00000542224 NPM1P06748 294 aaKnown RBP eCLIP9.68□□□□□ -0.86
LMNTD1-209ENST00000542224 ASTLQ6HA08 431 aaPredicted RBP9.65□□□□□ -0.86
LMNTD1-209ENST00000542224 SCUBE2Q9NQ36 999 aa9.65□□□□□ -0.86
LMNTD1-209ENST00000542224 POTEJP0CG39 1038 aa9.64□□□□□ -0.87
LMNTD1-209ENST00000542224 ATMINO43313 823 aaPredicted RBP9.63□□□□□ -0.87
LMNTD1-209ENST00000542224 LCE2DQ5TA82 110 aaPredicted RBP9.6□□□□□ -0.87
LMNTD1-209ENST00000542224 MS4A3Q96HJ5 214 aa9.59□□□□□ -0.87
LMNTD1-209ENST00000542224 CDAN1Q8IWY9 1227 aa9.53□□□□□ -0.88
LMNTD1-209ENST00000542224 ATN1P54259 1190 aaPredicted RBP9.5□□□□□ -0.89
LMNTD1-209ENST00000542224 MNX1P50219 401 aaPredicted RBP9.49□□□□□ -0.89
LMNTD1-209ENST00000542224 TSPYL2Q9H2G4 693 aaPredicted RBP9.46□□□□□ -0.9
LMNTD1-209ENST00000542224 SPDYE4A6NLX3 237 aa9.45□□□□□ -0.9
LMNTD1-209ENST00000542224 SEC24BO95487 1268 aa9.43□□□□□ -0.9
LMNTD1-209ENST00000542224 POTEFA5A3E0 1075 aa9.39□□□□□ -0.91
LMNTD1-209ENST00000542224 BMP2KQ9NSY1 1161 aaPredicted RBP9.39□□□□□ -0.91
LMNTD1-209ENST00000542224 KIF12Q96FN5 646 aa9.37□□□□□ -0.91
LMNTD1-209ENST00000542224 CCDC61Q9Y6R9 512 aa9.37□□□□□ -0.91
LMNTD1-209ENST00000542224 TIE1P35590 1138 aa9.34□□□□□ -0.91
LMNTD1-209ENST00000542224 COLQQ9Y215 455 aaPredicted RBP9.33□□□□□ -0.92
LMNTD1-209ENST00000542224 ST18O60284 1047 aa9.32□□□□□ -0.92
LMNTD1-209ENST00000542224 MMRN1Q13201 1228 aa9.32□□□□□ -0.92
LMNTD1-209ENST00000542224 SLAIN1Q8ND83 568 aa9.32□□□□□ -0.92
LMNTD1-209ENST00000542224 TRPC6Q9Y210 931 aa9.31□□□□□ -0.92
LMNTD1-209ENST00000542224 MAP3K13O43283 966 aa9.3□□□□□ -0.92
LMNTD1-209ENST00000542224 SPNS2Q8IVW8 549 aa9.29□□□□□ -0.92
LMNTD1-209ENST00000542224 TTLL13PA6NNM8 815 aa9.27□□□□□ -0.93
LMNTD1-209ENST00000542224 IER5LQ5T953 404 aa9.26□□□□□ -0.93
LMNTD1-209ENST00000542224 PLEKHG5O94827 1062 aa9.23□□□□□ -0.93
LMNTD1-209ENST00000542224 TRIM35Q9UPQ4 493 aa9.23□□□□□ -0.93
LMNTD1-209ENST00000542224 TMEM121BQ9BXQ6 578 aaPredicted RBP9.2□□□□□ -0.94
LMNTD1-209ENST00000542224 SNPHO15079 494 aa9.18□□□□□ -0.94
LMNTD1-209ENST00000542224 PLCG2P16885 1265 aa9.17□□□□□ -0.94
LMNTD1-209ENST00000542224 SGIP1Q9BQI5 828 aa9.16□□□□□ -0.94
LMNTD1-209ENST00000542224 RASEFQ8IZ41 740 aa9.15□□□□□ -0.94
LMNTD1-209ENST00000542224 PCDHB13Q9Y5F0 798 aa9.15□□□□□ -0.94
LMNTD1-209ENST00000542224 MIER1Q8N108 512 aa9.14□□□□□ -0.95
LMNTD1-209ENST00000542224 MARVELD3Q96A59 401 aa9.13□□□□□ -0.95
LMNTD1-209ENST00000542224 TMEM106CQ9BVX2 250 aa9.1□□□□□ -0.95
LMNTD1-209ENST00000542224 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.09□□□□□ -0.95
LMNTD1-209ENST00000542224 IFNL1Q8IU54 200 aa9.05□□□□□ -0.96
LMNTD1-209ENST00000542224 IRX5P78411 483 aaPredicted RBP9.04□□□□□ -0.96
LMNTD1-209ENST00000542224 OCEL1Q9H607 264 aa9.04□□□□□ -0.96
LMNTD1-209ENST00000542224 EMP3P54852 163 aa9.03□□□□□ -0.96
LMNTD1-209ENST00000542224 FKBP8Q14318 412 aa9.03□□□□□ -0.96
LMNTD1-209ENST00000542224 PROM2Q8N271 834 aa9.02□□□□□ -0.97
LMNTD1-209ENST00000542224 PLCD3Q8N3E9 789 aa9□□□□□ -0.97
LMNTD1-209ENST00000542224 ZBTB47Q9UFB7 747 aaPredicted RBP8.97□□□□□ -0.97
LMNTD1-209ENST00000542224 FAM205CA6NFA0 338 aa8.96□□□□□ -0.98
LMNTD1-209ENST00000542224 HS3ST6Q96QI5 342 aa8.96□□□□□ -0.98
LMNTD1-209ENST00000542224 FAM212AQ96EL1 285 aa8.95□□□□□ -0.98
LMNTD1-209ENST00000542224 C3orf67Q6ZVT6 689 aa8.94□□□□□ -0.98
LMNTD1-209ENST00000542224 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
LMNTD1-209ENST00000542224 KRTAP3-2Q9BYR7 98 aa8.94□□□□□ -0.98
LMNTD1-209ENST00000542224 NUBP1P53384 320 aa8.91□□□□□ -0.98
LMNTD1-209ENST00000542224 POTEB3A0JP26 581 aa8.89□□□□□ -0.99
LMNTD1-209ENST00000542224 POTEBQ6S5H4 581 aa8.89□□□□□ -0.99
LMNTD1-209ENST00000542224 L3MBTL3Q96JM7 780 aaPredicted RBP8.88□□□□□ -0.99
LMNTD1-209ENST00000542224 GOLGA2Q08379 1002 aa8.84□□□□□ -0.99
LMNTD1-209ENST00000542224 MKRN3Q13064 507 aaKnown RBP8.82□□□□□ -1
LMNTD1-209ENST00000542224 DCAF8Q5TAQ9 597 aa8.82□□□□□ -1
LMNTD1-209ENST00000542224 RNF166Q96A37 237 aaPredicted RBP8.82□□□□□ -1
LMNTD1-209ENST00000542224 PYGBP11216 843 aa8.81□□□□□ -1
LMNTD1-209ENST00000542224 PCDHB8Q9UN66 801 aa8.81□□□□□ -1
LMNTD1-209ENST00000542224 PDCD7Q8N8D1 485 aaKnown RBP8.8□□□□□ -1
LMNTD1-209ENST00000542224 ZNF710Q8N1W2 664 aa8.77□□□□□ -1.01
LMNTD1-209ENST00000542224 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.76□□□□□ -1.01
LMNTD1-209ENST00000542224 ERBB3P21860 1342 aa8.76□□□□□ -1.01
LMNTD1-209ENST00000542224 MYT1LQ9UL68 1186 aa8.75□□□□□ -1.01
LMNTD1-209ENST00000542224 G3V3G9 751 aa8.73□□□□□ -1.01
LMNTD1-209ENST00000542224 HOXB1P14653 301 aaPredicted RBP8.71□□□□□ -1.02
LMNTD1-209ENST00000542224 ZNF467Q7Z7K2 595 aaPredicted RBP8.69□□□□□ -1.02
LMNTD1-209ENST00000542224 HOXB3P14651 431 aaPredicted RBP8.68□□□□□ -1.02
LMNTD1-209ENST00000542224 DOK7Q18PE1 504 aa8.68□□□□□ -1.02
LMNTD1-209ENST00000542224 RIMBP2O15034 1052 aa8.65□□□□□ -1.02
LMNTD1-209ENST00000542224 VARS2Q5ST30 1063 aaKnown RBP8.65□□□□□ -1.02
LMNTD1-209ENST00000542224 BOLA1Q9Y3E2 137 aa8.64□□□□□ -1.03
LMNTD1-209ENST00000542224 PTGER2P43116 358 aa8.63□□□□□ -1.03
LMNTD1-209ENST00000542224 PSEN1P49768 467 aa8.62□□□□□ -1.03
LMNTD1-209ENST00000542224 DPY19L2Q6NUT2 758 aa8.62□□□□□ -1.03
LMNTD1-209ENST00000542224 GSE1Q14687 1217 aa8.6□□□□□ -1.03
LMNTD1-209ENST00000542224 ZNF687Q8N1G0 1237 aa8.59□□□□□ -1.03
LMNTD1-209ENST00000542224 ILDR1Q86SU0 546 aaPredicted RBP8.57□□□□□ -1.04
LMNTD1-209ENST00000542224 FBXO3Q9UK99 471 aa8.57□□□□□ -1.04
LMNTD1-209ENST00000542224 VASPP50552 380 aaPredicted RBP8.56□□□□□ -1.04
LMNTD1-209ENST00000542224 ANKRD13DQ6ZTN6 518 aa8.56□□□□□ -1.04
LMNTD1-209ENST00000542224 CHRM1P11229 460 aaPredicted RBP8.54□□□□□ -1.04
LMNTD1-209ENST00000542224 ZSWIM6Q9HCJ5 1215 aa8.53□□□□□ -1.04
LMNTD1-209ENST00000542224 CABP2Q9NPB3 220 aa8.53□□□□□ -1.04
LMNTD1-209ENST00000542224 PDAP1Q13442 181 aaKnown RBP8.52□□□□□ -1.05
LMNTD1-209ENST00000542224 KLHL34Q8N239 644 aa8.51□□□□□ -1.05
LMNTD1-209ENST00000542224 PLA2G2EQ9NZK7 142 aa8.51□□□□□ -1.05
LMNTD1-209ENST00000542224 IFNLR1Q8IU57 520 aaPredicted RBP8.49□□□□□ -1.05
LMNTD1-209ENST00000542224 GPR153Q6NV75 609 aa8.45□□□□□ -1.06
LMNTD1-209ENST00000542224 LSM11P83369 360 aaKnown RBP eCLIP8.43□□□□□ -1.06
LMNTD1-209ENST00000542224 HCSTQ9UBK5 93 aa8.43□□□□□ -1.06
LMNTD1-209ENST00000542224 ARSIQ5FYB1 569 aa8.41□□□□□ -1.06
LMNTD1-209ENST00000542224 NISCHQ9Y2I1 1504 aa8.4□□□□□ -1.06
LMNTD1-209ENST00000542224 ZNF316A6NFI3 1004 aaPredicted RBP8.38□□□□□ -1.07
LMNTD1-209ENST00000542224 MICALL2Q8IY33 904 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms