RNA–Protein interactions for RNA: ENST00000541466.1

KNTC1-212, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 616 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-212ENST00000541466 CREBZFQ9NS37 354 aa9.06□□□□□ -0.96
KNTC1-212ENST00000541466 C7P10643 843 aa9.04□□□□□ -0.96
KNTC1-212ENST00000541466 ASTLQ6HA08 431 aaPredicted RBP9.04□□□□□ -0.96
KNTC1-212ENST00000541466 SLC39A7Q92504 469 aa9.04□□□□□ -0.96
KNTC1-212ENST00000541466 CDAN1Q8IWY9 1227 aa9.01□□□□□ -0.97
KNTC1-212ENST00000541466 ATMINO43313 823 aaPredicted RBP9□□□□□ -0.97
KNTC1-212ENST00000541466 PAK3O75914 559 aaPredicted RBP8.98□□□□□ -0.97
KNTC1-212ENST00000541466 NPM1P06748 294 aaKnown RBP eCLIP8.98□□□□□ -0.97
KNTC1-212ENST00000541466 SCUBE2Q9NQ36 999 aa8.98□□□□□ -0.97
KNTC1-212ENST00000541466 MS4A3Q96HJ5 214 aa8.94□□□□□ -0.98
KNTC1-212ENST00000541466 POTEFA5A3E0 1075 aa8.89□□□□□ -0.99
KNTC1-212ENST00000541466 PLEKHG5O94827 1062 aa8.88□□□□□ -0.99
KNTC1-212ENST00000541466 PROM2Q8N271 834 aa8.88□□□□□ -0.99
KNTC1-212ENST00000541466 ATN1P54259 1190 aaPredicted RBP8.87□□□□□ -0.99
KNTC1-212ENST00000541466 MMRN1Q13201 1228 aa8.87□□□□□ -0.99
KNTC1-212ENST00000541466 MNX1P50219 401 aaPredicted RBP8.86□□□□□ -0.99
KNTC1-212ENST00000541466 MIER1Q8N108 512 aa8.85□□□□□ -0.99
KNTC1-212ENST00000541466 SPNS2Q8IVW8 549 aa8.82□□□□□ -1
KNTC1-212ENST00000541466 TSPYL2Q9H2G4 693 aaPredicted RBP8.82□□□□□ -1
KNTC1-212ENST00000541466 PLCD3Q8N3E9 789 aa8.79□□□□□ -1
KNTC1-212ENST00000541466 ST18O60284 1047 aa8.78□□□□□ -1
KNTC1-212ENST00000541466 FKBP8Q14318 412 aa8.78□□□□□ -1
KNTC1-212ENST00000541466 BMP2KQ9NSY1 1161 aaPredicted RBP8.74□□□□□ -1.01
KNTC1-212ENST00000541466 COLQQ9Y215 455 aaPredicted RBP8.73□□□□□ -1.01
KNTC1-212ENST00000541466 TRPC6Q9Y210 931 aa8.7□□□□□ -1.02
KNTC1-212ENST00000541466 KIF12Q96FN5 646 aa8.69□□□□□ -1.02
KNTC1-212ENST00000541466 ZBTB47Q9UFB7 747 aaPredicted RBP8.69□□□□□ -1.02
KNTC1-212ENST00000541466 CCDC61Q9Y6R9 512 aa8.69□□□□□ -1.02
KNTC1-212ENST00000541466 SEC24BO95487 1268 aa8.66□□□□□ -1.02
KNTC1-212ENST00000541466 TIE1P35590 1138 aa8.66□□□□□ -1.02
KNTC1-212ENST00000541466 RASEFQ8IZ41 740 aa8.66□□□□□ -1.02
KNTC1-212ENST00000541466 SLAIN1Q8ND83 568 aa8.66□□□□□ -1.02
KNTC1-212ENST00000541466 MAP3K13O43283 966 aa8.63□□□□□ -1.03
KNTC1-212ENST00000541466 FBXO3Q9UK99 471 aa8.61□□□□□ -1.03
KNTC1-212ENST00000541466 TTLL13PA6NNM8 815 aa8.6□□□□□ -1.03
KNTC1-212ENST00000541466 TMEM121BQ9BXQ6 578 aaPredicted RBP8.6□□□□□ -1.03
KNTC1-212ENST00000541466 NUBP1P53384 320 aa8.58□□□□□ -1.04
KNTC1-212ENST00000541466 IER5LQ5T953 404 aa8.58□□□□□ -1.04
KNTC1-212ENST00000541466 FAM212AQ96EL1 285 aa8.58□□□□□ -1.04
KNTC1-212ENST00000541466 PCDHB13Q9Y5F0 798 aa8.56□□□□□ -1.04
KNTC1-212ENST00000541466 DCAF8Q5TAQ9 597 aa8.55□□□□□ -1.04
KNTC1-212ENST00000541466 MARVELD3Q96A59 401 aa8.54□□□□□ -1.04
KNTC1-212ENST00000541466 KLHL34Q8N239 644 aa8.53□□□□□ -1.04
KNTC1-212ENST00000541466 SGIP1Q9BQI5 828 aa8.53□□□□□ -1.04
KNTC1-212ENST00000541466 TRIM35Q9UPQ4 493 aa8.53□□□□□ -1.04
KNTC1-212ENST00000541466 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
KNTC1-212ENST00000541466 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
KNTC1-212ENST00000541466 SNPHO15079 494 aa8.48□□□□□ -1.05
KNTC1-212ENST00000541466 IFNL1Q8IU54 200 aa8.47□□□□□ -1.05
KNTC1-212ENST00000541466 PYGBP11216 843 aa8.46□□□□□ -1.06
KNTC1-212ENST00000541466 VASPP50552 380 aaPredicted RBP8.46□□□□□ -1.06
KNTC1-212ENST00000541466 TMEM106CQ9BVX2 250 aa8.45□□□□□ -1.06
KNTC1-212ENST00000541466 POTEB3A0JP26 581 aa8.44□□□□□ -1.06
KNTC1-212ENST00000541466 POTEBQ6S5H4 581 aa8.44□□□□□ -1.06
KNTC1-212ENST00000541466 PLCG2P16885 1265 aa8.43□□□□□ -1.06
KNTC1-212ENST00000541466 IRX5P78411 483 aaPredicted RBP8.41□□□□□ -1.06
KNTC1-212ENST00000541466 GSE1Q14687 1217 aa8.41□□□□□ -1.06
KNTC1-212ENST00000541466 EMP3P54852 163 aa8.4□□□□□ -1.06
KNTC1-212ENST00000541466 HS3ST6Q96QI5 342 aa8.38□□□□□ -1.07
KNTC1-212ENST00000541466 PCDHB8Q9UN66 801 aa8.38□□□□□ -1.07
KNTC1-212ENST00000541466 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.36□□□□□ -1.07
KNTC1-212ENST00000541466 FAM205CA6NFA0 338 aa8.34□□□□□ -1.07
KNTC1-212ENST00000541466 ZNF467Q7Z7K2 595 aaPredicted RBP8.33□□□□□ -1.08
KNTC1-212ENST00000541466 OCEL1Q9H607 264 aa8.33□□□□□ -1.08
KNTC1-212ENST00000541466 CIZ1Q9ULV3 898 aaPredicted RBP8.33□□□□□ -1.08
KNTC1-212ENST00000541466 GOLGA2Q08379 1002 aa8.32□□□□□ -1.08
KNTC1-212ENST00000541466 SPOCK2Q92563 424 aa8.32□□□□□ -1.08
KNTC1-212ENST00000541466 CHRM1P11229 460 aaPredicted RBP8.3□□□□□ -1.08
KNTC1-212ENST00000541466 IFNLR1Q8IU57 520 aaPredicted RBP8.29□□□□□ -1.08
KNTC1-212ENST00000541466 MKRN3Q13064 507 aaKnown RBP8.28□□□□□ -1.08
KNTC1-212ENST00000541466 RNF166Q96A37 237 aaPredicted RBP8.27□□□□□ -1.09
KNTC1-212ENST00000541466 PSEN1P49768 467 aa8.26□□□□□ -1.09
KNTC1-212ENST00000541466 PDAP1Q13442 181 aaKnown RBP8.22□□□□□ -1.09
KNTC1-212ENST00000541466 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.21□□□□□ -1.11e-6■■□□□ 11.5
KNTC1-212ENST00000541466 L3MBTL3Q96JM7 780 aaPredicted RBP8.2□□□□□ -1.1
KNTC1-212ENST00000541466 AMER1Q5JTC6 1135 aaPredicted RBP8.18□□□□□ -1.1
KNTC1-212ENST00000541466 C3orf67Q6ZVT6 689 aa8.18□□□□□ -1.1
KNTC1-212ENST00000541466 PDCD7Q8N8D1 485 aaKnown RBP8.17□□□□□ -1.1
KNTC1-212ENST00000541466 CABP2Q9NPB3 220 aa8.17□□□□□ -1.1
KNTC1-212ENST00000541466 MYT1LQ9UL68 1186 aa8.17□□□□□ -1.1
KNTC1-212ENST00000541466 G3V3G9 751 aa8.16□□□□□ -1.1
KNTC1-212ENST00000541466 TRIM41Q8WV44 630 aa8.16□□□□□ -1.1
KNTC1-212ENST00000541466 RTN4Q9NQC3 1192 aaKnown RBP8.14□□□□□ -1.11
KNTC1-212ENST00000541466 HOXB3P14651 431 aaPredicted RBP8.11□□□□□ -1.11
KNTC1-212ENST00000541466 HOXB1P14653 301 aaPredicted RBP8.1□□□□□ -1.11
KNTC1-212ENST00000541466 DPY19L2Q6NUT2 758 aa8.1□□□□□ -1.11
KNTC1-212ENST00000541466 ERBB3P21860 1342 aa8.08□□□□□ -1.12
KNTC1-212ENST00000541466 EFCAB3Q8N7B9 438 aa8.06□□□□□ -1.12
KNTC1-212ENST00000541466 BOLA1Q9Y3E2 137 aa8.06□□□□□ -1.12
KNTC1-212ENST00000541466 ILDR1Q86SU0 546 aaPredicted RBP8.05□□□□□ -1.12
KNTC1-212ENST00000541466 RIOK3O14730 519 aaKnown RBP8.04□□□□□ -1.12
KNTC1-212ENST00000541466 PTGER2P43116 358 aa8.02□□□□□ -1.13
KNTC1-212ENST00000541466 VGFO15240 615 aaPredicted RBP8.01□□□□□ -1.13
KNTC1-212ENST00000541466 VARS2Q5ST30 1063 aaKnown RBP8.01□□□□□ -1.13
KNTC1-212ENST00000541466 ZNF710Q8N1W2 664 aa8.01□□□□□ -1.13
KNTC1-212ENST00000541466 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8□□□□□ -1.13
KNTC1-212ENST00000541466 ZFP91Q96JP5 570 aaPredicted RBP8□□□□□ -1.13
KNTC1-212ENST00000541466 SOX12O15370 315 aa7.99□□□□□ -1.13
KNTC1-212ENST00000541466 ZNF687Q8N1G0 1237 aa7.99□□□□□ -1.13
KNTC1-212ENST00000541466 TAOK2Q9UL54 1235 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms