RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 PLCB2Q00722 1185 aa20.1■□□□□ 0.81
HMGA2-210ENST00000541363 AMER1Q5JTC6 1135 aaPredicted RBP20.1■□□□□ 0.81
HMGA2-210ENST00000541363 L1TD1Q5T7N2 865 aaKnown RBP20.1■□□□□ 0.81
HMGA2-210ENST00000541363 DDX10Q13206 875 aaKnown RBP20.08■□□□□ 0.8
HMGA2-210ENST00000541363 ZBTB7CA1YPR0 619 aa20.07■□□□□ 0.8
HMGA2-210ENST00000541363 P3H3Q8IVL6 736 aa20.04■□□□□ 0.8
HMGA2-210ENST00000541363 CLSTN1O94985 981 aa20.02■□□□□ 0.8
HMGA2-210ENST00000541363 PPM1GO15355 546 aaPredicted RBP20.02■□□□□ 0.79
HMGA2-210ENST00000541363 MRS2Q9HD23 443 aa20.02■□□□□ 0.79
HMGA2-210ENST00000541363 C14orf37Q86TY3 774 aa19.99■□□□□ 0.79
HMGA2-210ENST00000541363 IRX6P78412 446 aaPredicted RBP19.98■□□□□ 0.79
HMGA2-210ENST00000541363 TAOK2Q9UL54 1235 aa19.97■□□□□ 0.79
HMGA2-210ENST00000541363 MSNP26038 577 aaKnown RBP19.95■□□□□ 0.78
HMGA2-210ENST00000541363 KIAA2012Q0VF49 1180 aa19.95■□□□□ 0.78
HMGA2-210ENST00000541363 FGD1P98174 961 aa19.95■□□□□ 0.78
HMGA2-210ENST00000541363 FTSJ3Q8IY81 847 aaKnown RBP19.94■□□□□ 0.78
HMGA2-210ENST00000541363 HSP90AB1P08238 724 aaKnown RBP19.93■□□□□ 0.78
HMGA2-210ENST00000541363 RTN4Q9NQC3 1192 aaKnown RBP19.93■□□□□ 0.78
HMGA2-210ENST00000541363 NOC3LQ8WTT2 800 aaKnown RBP19.92■□□□□ 0.78
HMGA2-210ENST00000541363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.92■□□□□ 0.783e-6■□□□□ 8.2
HMGA2-210ENST00000541363 NPHP1O15259 732 aa19.92■□□□□ 0.78
HMGA2-210ENST00000541363 DRC7Q8IY82 874 aa19.92■□□□□ 0.78
HMGA2-210ENST00000541363 NPM1P06748 294 aaKnown RBP eCLIP19.91■□□□□ 0.78
HMGA2-210ENST00000541363 PNNQ9H307 717 aaKnown RBP19.9■□□□□ 0.78
HMGA2-210ENST00000541363 PLEKHG5O94827 1062 aa19.9■□□□□ 0.78
HMGA2-210ENST00000541363 GOLGA6L4A6NEF3 574 aa19.89■□□□□ 0.78
HMGA2-210ENST00000541363 HAP1P54257 671 aaPredicted RBP19.89■□□□□ 0.77
HMGA2-210ENST00000541363 NAP1L2Q9ULW6 460 aaPredicted RBP19.89■□□□□ 0.77
HMGA2-210ENST00000541363 PRM3Q9NNZ6 103 aa19.88■□□□□ 0.77
HMGA2-210ENST00000541363 TNNT3P45378 269 aaPredicted RBP19.86■□□□□ 0.77
HMGA2-210ENST00000541363 KDM2AQ9Y2K7 1162 aa19.86■□□□□ 0.77
HMGA2-210ENST00000541363 GOLGA2Q08379 1002 aa19.86■□□□□ 0.77
HMGA2-210ENST00000541363 KCNJ4P48050 445 aa19.85■□□□□ 0.77
HMGA2-210ENST00000541363 CFAP53Q96M91 514 aa19.83■□□□□ 0.76
HMGA2-210ENST00000541363 OS9Q13438 667 aaPredicted RBP19.81■□□□□ 0.76
HMGA2-210ENST00000541363 CHMP4BQ9H444 224 aaKnown RBP19.79■□□□□ 0.76
HMGA2-210ENST00000541363 LAS1LQ9Y4W2 734 aaKnown RBP19.79■□□□□ 0.76
HMGA2-210ENST00000541363 A0A0U1RQG5 324 aaPredicted RBP19.75■□□□□ 0.75
HMGA2-210ENST00000541363 PPP1R15AO75807 674 aaPredicted RBP19.75■□□□□ 0.75
HMGA2-210ENST00000541363 GOLGA6L1Q8N7Z2 621 aa19.75■□□□□ 0.75
HMGA2-210ENST00000541363 HSCBQ8IWL3 235 aa19.73■□□□□ 0.75
HMGA2-210ENST00000541363 NOP58Q9Y2X3 529 aaKnown RBP19.73■□□□□ 0.75
HMGA2-210ENST00000541363 GNL2Q13823 731 aaKnown RBP19.72■□□□□ 0.75
HMGA2-210ENST00000541363 MCCP23508 829 aa19.72■□□□□ 0.75
HMGA2-210ENST00000541363 USP35Q9P2H5 1018 aa19.71■□□□□ 0.75
HMGA2-210ENST00000541363 ISY1Q9ULR0 285 aaKnown RBP19.67■□□□□ 0.74
HMGA2-210ENST00000541363 MAPK8IP3Q9UPT6 1336 aa19.67■□□□□ 0.74
HMGA2-210ENST00000541363 EIF4G2P78344 907 aaKnown RBP eCLIP19.67■□□□□ 0.74
HMGA2-210ENST00000541363 CHIC2Q9UKJ5 165 aa19.67■□□□□ 0.74
HMGA2-210ENST00000541363 MS4A1P11836 297 aa19.66■□□□□ 0.74
HMGA2-210ENST00000541363 TSPY4P0CV99 314 aa19.66■□□□□ 0.74
HMGA2-210ENST00000541363 TSPY10P0CW01 314 aa19.66■□□□□ 0.74
HMGA2-210ENST00000541363 CALRP27797 417 aaKnown RBP19.66■□□□□ 0.74
HMGA2-210ENST00000541363 SETQ01105 290 aaPredicted RBP19.65■□□□□ 0.74
HMGA2-210ENST00000541363 PTMSP20962 102 aa19.64■□□□□ 0.73
HMGA2-210ENST00000541363 ARID4BQ4LE39 1312 aaPredicted RBP19.64■□□□□ 0.73
HMGA2-210ENST00000541363 CDCA8Q53HL2 280 aa19.63■□□□□ 0.73
HMGA2-210ENST00000541363 CFAP44Q96MT7 982 aa19.63■□□□□ 0.73
HMGA2-210ENST00000541363 RGS3P49796 1198 aa19.63■□□□□ 0.73
HMGA2-210ENST00000541363 KNSTRNQ9Y448 316 aa19.63■□□□□ 0.73
HMGA2-210ENST00000541363 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.73
HMGA2-210ENST00000541363 TPM4P67936 248 aa19.61■□□□□ 0.73
HMGA2-210ENST00000541363 SENP3Q9H4L4 574 aaPredicted RBP19.59■□□□□ 0.73
HMGA2-210ENST00000541363 NUDCQ9Y266 331 aa19.58■□□□□ 0.73
HMGA2-210ENST00000541363 CSRNP3Q8WYN3 585 aa19.58■□□□□ 0.72
HMGA2-210ENST00000541363 FRAT1Q92837 279 aaPredicted RBP19.56■□□□□ 0.72
HMGA2-210ENST00000541363 ARID3AQ99856 593 aa19.56■□□□□ 0.72
HMGA2-210ENST00000541363 HTATSF1O43719 755 aaKnown RBP19.55■□□□□ 0.72
HMGA2-210ENST00000541363 SUPT16HQ9Y5B9 1047 aaKnown RBP19.54■□□□□ 0.72
HMGA2-210ENST00000541363 MIER1Q8N108 512 aa19.53■□□□□ 0.72
HMGA2-210ENST00000541363 NEUROD2Q15784 382 aa19.52■□□□□ 0.71
HMGA2-210ENST00000541363 PPP4R2Q9NY27 417 aa19.51■□□□□ 0.71
HMGA2-210ENST00000541363 SYAP1Q96A49 352 aaPredicted RBP19.51■□□□□ 0.71
HMGA2-210ENST00000541363 PDE4CQ08493 712 aa19.51■□□□□ 0.71
HMGA2-210ENST00000541363 CEP89Q96ST8 783 aa19.51■□□□□ 0.71
HMGA2-210ENST00000541363 HIRIP3Q9BW71 556 aaPredicted RBP19.5■□□□□ 0.71
HMGA2-210ENST00000541363 GBP4Q96PP9 640 aa19.5■□□□□ 0.71
HMGA2-210ENST00000541363 CCDC34Q96HJ3 373 aa19.49■□□□□ 0.71
HMGA2-210ENST00000541363 KIAA1211Q6ZU35 1233 aa19.48■□□□□ 0.71
HMGA2-210ENST00000541363 SPRYD3Q8NCJ5 442 aa19.48■□□□□ 0.71
HMGA2-210ENST00000541363 LMOD2Q6P5Q4 547 aa19.47■□□□□ 0.71
HMGA2-210ENST00000541363 DEKP35659 375 aaKnown RBP19.47■□□□□ 0.71
HMGA2-210ENST00000541363 MTUS2Q5JR59 1369 aa19.43■□□□□ 0.7
HMGA2-210ENST00000541363 TPM3P06753 285 aa19.4■□□□□ 0.7
HMGA2-210ENST00000541363 SENP3-EIF4A1A0A087X0R7 540 aa19.39■□□□□ 0.69
HMGA2-210ENST00000541363 CSPP1Q1MSJ5 1256 aa19.39■□□□□ 0.69
HMGA2-210ENST00000541363 KRI1Q8N9T8 703 aaKnown RBP19.38■□□□□ 0.69
HMGA2-210ENST00000541363 HSP90B1P14625 803 aaKnown RBP19.37■□□□□ 0.69
HMGA2-210ENST00000541363 U2SURPO15042 1029 aaKnown RBP19.37■□□□□ 0.69
HMGA2-210ENST00000541363 TMX4Q9H1E5 349 aaPredicted RBP19.37■□□□□ 0.69
HMGA2-210ENST00000541363 RGL3Q3MIN7 710 aa19.36■□□□□ 0.69
HMGA2-210ENST00000541363 POGKQ9P215 609 aa19.36■□□□□ 0.69
HMGA2-210ENST00000541363 CREBRFQ8IUR6 639 aa19.34■□□□□ 0.69
HMGA2-210ENST00000541363 RASSF8Q8NHQ8 419 aa19.34■□□□□ 0.69
HMGA2-210ENST00000541363 PATL2C9JE40 543 aaKnown RBP19.32■□□□□ 0.68
HMGA2-210ENST00000541363 GZF1Q9H116 711 aaPredicted RBP19.32■□□□□ 0.68
HMGA2-210ENST00000541363 RRP12Q5JTH9 1297 aaKnown RBP19.31■□□□□ 0.68
HMGA2-210ENST00000541363 PHF14O94880 888 aa19.31■□□□□ 0.68
HMGA2-210ENST00000541363 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.31■□□□□ 0.68
HMGA2-210ENST00000541363 CARD11Q9BXL7 1154 aa19.3■□□□□ 0.68
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