RNA–Protein interactions for RNA: ENST00000540706.5

SMG1P4-205, Transcript of SMG1 pseudogene 4, humanhuman

TSL 2

Gene SMG1P4, Length 2,543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P4-205ENST00000540706 SLC24A3Q9HC58 644 aa10.82□□□□□ -0.68
SMG1P4-205ENST00000540706 KCNV2Q8TDN2 545 aa10.82□□□□□ -0.68
SMG1P4-205ENST00000540706 ARID3CA6NKF2 412 aa10.8□□□□□ -0.68
SMG1P4-205ENST00000540706 LOC105371045A0A1W2PR82 267 aa10.78□□□□□ -0.68
SMG1P4-205ENST00000540706 PLCD3Q8N3E9 789 aa10.78□□□□□ -0.68
SMG1P4-205ENST00000540706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.77□□□□□ -0.69
SMG1P4-205ENST00000540706 HNRNPUL2Q1KMD3 747 aaKnown RBP10.77□□□□□ -0.69
SMG1P4-205ENST00000540706 NECTIN2Q92692 538 aa10.76□□□□□ -0.69
SMG1P4-205ENST00000540706 CADPS2Q86UW7 1296 aa10.74□□□□□ -0.69
SMG1P4-205ENST00000540706 ZC3H15Q8WU90 426 aaKnown RBP10.72□□□□□ -0.69
SMG1P4-205ENST00000540706 POLA2Q14181 598 aa10.71□□□□□ -0.69
SMG1P4-205ENST00000540706 GPBP1L1Q9HC44 474 aaPredicted RBP10.71□□□□□ -0.7
SMG1P4-205ENST00000540706 MIER1Q8N108 512 aa10.7□□□□□ -0.7
SMG1P4-205ENST00000540706 SPINK5Q9NQ38 1064 aaPredicted RBP10.67□□□□□ -0.7
SMG1P4-205ENST00000540706 ZMYND15Q9H091 742 aa10.64□□□□□ -0.71
SMG1P4-205ENST00000540706 STK25O00506 426 aa10.61□□□□□ -0.71
SMG1P4-205ENST00000540706 APLP2Q06481 763 aa10.59□□□□□ -0.71
SMG1P4-205ENST00000540706 IL27Q8NEV9 243 aa10.59□□□□□ -0.71
SMG1P4-205ENST00000540706 SEMA3EO15041 775 aa10.59□□□□□ -0.71
SMG1P4-205ENST00000540706 RSPH6AQ9H0K4 717 aa10.56□□□□□ -0.72
SMG1P4-205ENST00000540706 MKRN3Q13064 507 aaKnown RBP10.54□□□□□ -0.72
SMG1P4-205ENST00000540706 IGSF3O75054 1194 aa10.54□□□□□ -0.72
SMG1P4-205ENST00000540706 ZNF428Q96B54 188 aa10.53□□□□□ -0.72
SMG1P4-205ENST00000540706 APBB1O00213 710 aa10.53□□□□□ -0.72
SMG1P4-205ENST00000540706 CCDC180Q9P1Z9 1646 aa10.5□□□□□ -0.73
SMG1P4-205ENST00000540706 BCL11BQ9C0K0 894 aaPredicted RBP10.49□□□□□ -0.73
SMG1P4-205ENST00000540706 P3H3Q8IVL6 736 aa10.48□□□□□ -0.73
SMG1P4-205ENST00000540706 RIOK3O14730 519 aaKnown RBP10.47□□□□□ -0.73
SMG1P4-205ENST00000540706 STK24Q9Y6E0 443 aa10.45□□□□□ -0.74
SMG1P4-205ENST00000540706 ABCB7O75027 752 aa10.45□□□□□ -0.74
SMG1P4-205ENST00000540706 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.44□□□□□ -0.74
SMG1P4-205ENST00000540706 ZMYND10O75800 440 aa10.44□□□□□ -0.74
SMG1P4-205ENST00000540706 PABPN1Q86U42 306 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMG1P4-205ENST00000540706 ZFP91Q96JP5 570 aaPredicted RBP10.44□□□□□ -0.74
SMG1P4-205ENST00000540706 ZNF692Q9BU19 519 aaPredicted RBP10.44□□□□□ -0.74
SMG1P4-205ENST00000540706 STAG3Q9UJ98 1225 aa10.42□□□□□ -0.74
SMG1P4-205ENST00000540706 CCDC9Q9Y3X0 531 aaKnown RBP10.41□□□□□ -0.74
SMG1P4-205ENST00000540706 CCDC82Q8N4S0 544 aa10.4□□□□□ -0.75
SMG1P4-205ENST00000540706 OSCARQ8IYS5 282 aa10.39□□□□□ -0.75
SMG1P4-205ENST00000540706 PDIA4P13667 645 aaKnown RBP10.38□□□□□ -0.75
SMG1P4-205ENST00000540706 KDM4CQ9H3R0 1056 aa10.37□□□□□ -0.75
SMG1P4-205ENST00000540706 TESPA1A2RU30 521 aaPredicted RBP10.36□□□□□ -0.75
SMG1P4-205ENST00000540706 NUBP1P53384 320 aa10.36□□□□□ -0.75
SMG1P4-205ENST00000540706 CLUAP1Q96AJ1 413 aa10.35□□□□□ -0.75
SMG1P4-205ENST00000540706 ZBTB7CA1YPR0 619 aa10.35□□□□□ -0.75
SMG1P4-205ENST00000540706 WDR70Q9NW82 654 aa10.34□□□□□ -0.75
SMG1P4-205ENST00000540706 FOXD4L5Q5VV16 416 aaPredicted RBP10.33□□□□□ -0.76
SMG1P4-205ENST00000540706 FOXD4L4Q8WXT5 416 aaPredicted RBP10.33□□□□□ -0.76
SMG1P4-205ENST00000540706 KCTD17Q8N5Z5 321 aa10.33□□□□□ -0.76
SMG1P4-205ENST00000540706 FAM117AQ9C073 453 aa10.33□□□□□ -0.76
SMG1P4-205ENST00000540706 DCAF8Q5TAQ9 597 aa10.3□□□□□ -0.76
SMG1P4-205ENST00000540706 SSUH2Q9Y2M2 353 aa10.3□□□□□ -0.76
SMG1P4-205ENST00000540706 MTMR7Q9Y216 660 aa10.3□□□□□ -0.76
SMG1P4-205ENST00000540706 RBM26Q5T8P6 1007 aaKnown RBP10.29□□□□□ -0.76
SMG1P4-205ENST00000540706 VGFO15240 615 aaPredicted RBP10.28□□□□□ -0.76
SMG1P4-205ENST00000540706 RAD21O60216 631 aa10.28□□□□□ -0.76
SMG1P4-205ENST00000540706 CAPN15O75808 1086 aa10.27□□□□□ -0.77
SMG1P4-205ENST00000540706 PPP1R37O75864 691 aa10.27□□□□□ -0.77
SMG1P4-205ENST00000540706 BARGINQ6ZT62 677 aa10.27□□□□□ -0.77
SMG1P4-205ENST00000540706 AEBP1Q8IUX7 1158 aa10.26□□□□□ -0.77
SMG1P4-205ENST00000540706 PYGBP11216 843 aa10.24□□□□□ -0.77
SMG1P4-205ENST00000540706 RGS22Q8NE09 1264 aa10.24□□□□□ -0.77
SMG1P4-205ENST00000540706 PLEKHG3A1L390 1219 aa10.23□□□□□ -0.77
SMG1P4-205ENST00000540706 ARHGEF1Q92888 912 aaKnown RBP10.22□□□□□ -0.77
SMG1P4-205ENST00000540706 MLLT3P42568 568 aaPredicted RBP10.21□□□□□ -0.78
SMG1P4-205ENST00000540706 ONECUT3O60422 494 aaPredicted RBP10.2□□□□□ -0.78
SMG1P4-205ENST00000540706 GSE1Q14687 1217 aa10.2□□□□□ -0.78
SMG1P4-205ENST00000540706 PDE4DQ08499 809 aa10.19□□□□□ -0.78
SMG1P4-205ENST00000540706 E2F4Q16254 413 aa10.19□□□□□ -0.78
SMG1P4-205ENST00000540706 RASEFQ8IZ41 740 aa10.19□□□□□ -0.78
SMG1P4-205ENST00000540706 TRIM66O15016 1216 aa10.18□□□□□ -0.78
SMG1P4-205ENST00000540706 ZNF316A6NFI3 1004 aaPredicted RBP10.17□□□□□ -0.78
SMG1P4-205ENST00000540706 RBM25P49756 843 aaKnown RBP10.17□□□□□ -0.78
SMG1P4-205ENST00000540706 AK7Q96M32 723 aa10.16□□□□□ -0.78
SMG1P4-205ENST00000540706 MFRPQ9BY79 579 aa10.16□□□□□ -0.78
SMG1P4-205ENST00000540706 ZNF777Q9ULD5 760 aaPredicted RBP10.15□□□□□ -0.78
SMG1P4-205ENST00000540706 ZBTB47Q9UFB7 747 aaPredicted RBP10.15□□□□□ -0.78
SMG1P4-205ENST00000540706 IRF5Q13568 498 aa10.12□□□□□ -0.79
SMG1P4-205ENST00000540706 KRI1Q8N9T8 703 aaKnown RBP10.12□□□□□ -0.79
SMG1P4-205ENST00000540706 NCKAP5LQ9HCH0 1330 aa10.12□□□□□ -0.79
SMG1P4-205ENST00000540706 POM121Q96HA1 1249 aa10.12□□□□□ -0.79
SMG1P4-205ENST00000540706 TRAK2O60296 914 aa10.11□□□□□ -0.79
SMG1P4-205ENST00000540706 PLEKHG5O94827 1062 aa10.09□□□□□ -0.79
SMG1P4-205ENST00000540706 GZF1Q9H116 711 aaPredicted RBP10.09□□□□□ -0.79
SMG1P4-205ENST00000540706 MNX1P50219 401 aaPredicted RBP10.08□□□□□ -0.8
SMG1P4-205ENST00000540706 RETREG2Q8NC44 543 aa10.08□□□□□ -0.8
SMG1P4-205ENST00000540706 SPDYE2BA6NHP3 402 aa10.07□□□□□ -0.8
SMG1P4-205ENST00000540706 SPDYE6P0CI01 402 aa10.07□□□□□ -0.8
SMG1P4-205ENST00000540706 SPDYE2Q495Y8 402 aa10.07□□□□□ -0.8
SMG1P4-205ENST00000540706 MFAP1P55081 439 aaKnown RBP10.07□□□□□ -0.8
SMG1P4-205ENST00000540706 SGIP1Q9BQI5 828 aa10.06□□□□□ -0.8
SMG1P4-205ENST00000540706 GPIHBP1Q8IV16 184 aa10.05□□□□□ -0.8
SMG1P4-205ENST00000540706 RYDENQ9NUL5 291 aaKnown RBP10.03□□□□□ -0.8
SMG1P4-205ENST00000540706 CARNS1A5YM72 827 aa10.02□□□□□ -0.81
SMG1P4-205ENST00000540706 FAM212AQ96EL1 285 aa10.02□□□□□ -0.81
SMG1P4-205ENST00000540706 EIF5BO60841 1220 aaKnown RBP10□□□□□ -0.81
SMG1P4-205ENST00000540706 TMCO4Q5TGY1 634 aa10□□□□□ -0.81
SMG1P4-205ENST00000540706 TRAIPQ9BWF2 469 aa10□□□□□ -0.81
SMG1P4-205ENST00000540706 GPR37O15354 613 aa9.99□□□□□ -0.81
SMG1P4-205ENST00000540706 PARP9Q8IXQ6 854 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms