RNA–Protein interactions for RNA: ENST00000540313.1

RTL9-203, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RTL9, Length 5,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-203ENST00000540313 HDGFP51858 240 aaKnown RBP8.81□□□□□ -1
RTL9-203ENST00000540313 KCNH8Q96L42 1107 aa8.81□□□□□ -1
RTL9-203ENST00000540313 WRNQ14191 1432 aaPredicted RBP eCLIP8.81□□□□□ -1
RTL9-203ENST00000540313 BICRAQ9NZM4 1560 aa8.8□□□□□ -1
RTL9-203ENST00000540313 C14orf37Q86TY3 774 aa8.8□□□□□ -1
RTL9-203ENST00000540313 GLIPR1L2Q4G1C9 344 aa8.79□□□□□ -1
RTL9-203ENST00000540313 ANP32BQ92688 251 aaKnown RBP8.79□□□□□ -1
RTL9-203ENST00000540313 CARMIL2Q6F5E8 1435 aa8.79□□□□□ -1
RTL9-203ENST00000540313 IRX6P78412 446 aaPredicted RBP8.79□□□□□ -1
RTL9-203ENST00000540313 UPF2Q9HAU5 1272 aaKnown RBP8.78□□□□□ -1
RTL9-203ENST00000540313 BCL11AQ9H165 835 aa8.78□□□□□ -1
RTL9-203ENST00000540313 MRS2Q9HD23 443 aa8.78□□□□□ -1
RTL9-203ENST00000540313 CLIP1P30622 1438 aa8.77□□□□□ -1.01
RTL9-203ENST00000540313 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.77□□□□□ -1.01
RTL9-203ENST00000540313 HAP1P54257 671 aaPredicted RBP8.76□□□□□ -1.01
RTL9-203ENST00000540313 TMC1Q8TDI8 760 aa8.76□□□□□ -1.01
RTL9-203ENST00000540313 CEP162Q5TB80 1403 aa8.76□□□□□ -1.01
RTL9-203ENST00000540313 EIF4G1Q04637 1599 aaKnown RBP8.75□□□□□ -1.01
RTL9-203ENST00000540313 HSP90AA1P07900 732 aaKnown RBP8.75□□□□□ -1.01
RTL9-203ENST00000540313 SALL2Q9Y467 1007 aaPredicted RBP8.75□□□□□ -1.01
RTL9-203ENST00000540313 CEP164Q9UPV0 1460 aa8.74□□□□□ -1.01
RTL9-203ENST00000540313 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.73□□□□□ -1.01
RTL9-203ENST00000540313 HIRIP3Q9BW71 556 aaPredicted RBP8.73□□□□□ -1.01
RTL9-203ENST00000540313 KANK1Q14678 1352 aa8.73□□□□□ -1.01
RTL9-203ENST00000540313 AEBP2Q6ZN18 517 aaPredicted RBP8.72□□□□□ -1.01
RTL9-203ENST00000540313 UNC13AQ9UPW8 1703 aa8.72□□□□□ -1.01
RTL9-203ENST00000540313 GOLGA3Q08378 1498 aa8.72□□□□□ -1.01
RTL9-203ENST00000540313 ABCC8Q09428 1581 aa8.72□□□□□ -1.01
RTL9-203ENST00000540313 SUPT16HQ9Y5B9 1047 aaKnown RBP8.72□□□□□ -1.01
RTL9-203ENST00000540313 MROH2BQ7Z745 1585 aa8.71□□□□□ -1.02
RTL9-203ENST00000540313 ATAD2BQ9ULI0 1458 aa8.71□□□□□ -1.02
RTL9-203ENST00000540313 CHIC2Q9UKJ5 165 aa8.7□□□□□ -1.02
RTL9-203ENST00000540313 DDRGK1Q96HY6 314 aa8.7□□□□□ -1.02
RTL9-203ENST00000540313 EIF4G2P78344 907 aaKnown RBP eCLIP8.7□□□□□ -1.02
RTL9-203ENST00000540313 CFDP1Q9UEE9 299 aaPredicted RBP8.7□□□□□ -1.02
RTL9-203ENST00000540313 SMARCA4P51532 1647 aa8.69□□□□□ -1.02
RTL9-203ENST00000540313 ARXQ96QS3 562 aa8.68□□□□□ -1.02
RTL9-203ENST00000540313 DNAJC5BQ9UF47 199 aa8.68□□□□□ -1.02
RTL9-203ENST00000540313 WDR43Q15061 677 aaKnown RBP eCLIP8.68□□□□□ -1.02
RTL9-203ENST00000540313 TNIKQ9UKE5 1360 aa8.68□□□□□ -1.02
RTL9-203ENST00000540313 OSCARQ8IYS5 282 aa8.67□□□□□ -1.02
RTL9-203ENST00000540313 NCAPD3P42695 1498 aa8.67□□□□□ -1.02
RTL9-203ENST00000540313 CADPSQ9ULU8 1353 aa8.67□□□□□ -1.02
RTL9-203ENST00000540313 SOGA1O94964 1423 aa8.66□□□□□ -1.02
RTL9-203ENST00000540313 FHAD1B1AJZ9 1412 aa8.66□□□□□ -1.02
RTL9-203ENST00000540313 CC2D2AQ9P2K1 1620 aa8.65□□□□□ -1.02
RTL9-203ENST00000540313 CUX2O14529 1486 aa8.65□□□□□ -1.02
RTL9-203ENST00000540313 CDCA8Q53HL2 280 aa8.65□□□□□ -1.03
RTL9-203ENST00000540313 PPP4R2Q9NY27 417 aa8.65□□□□□ -1.03
RTL9-203ENST00000540313 CCNB3Q8WWL7 1395 aa8.64□□□□□ -1.03
RTL9-203ENST00000540313 CARMIL1Q5VZK9 1371 aa8.64□□□□□ -1.03
RTL9-203ENST00000540313 BECN1Q14457 450 aa8.64□□□□□ -1.03
RTL9-203ENST00000540313 PPM1GO15355 546 aaPredicted RBP8.63□□□□□ -1.03
RTL9-203ENST00000540313 NOP58Q9Y2X3 529 aaKnown RBP8.63□□□□□ -1.03
RTL9-203ENST00000540313 A0A0G2JS52 829 aa8.62□□□□□ -1.03
RTL9-203ENST00000540313 KDM2AQ9Y2K7 1162 aa8.62□□□□□ -1.03
RTL9-203ENST00000540313 RRP7BPQ9NSQ0 103 aa8.6□□□□□ -1.03
RTL9-203ENST00000540313 EFCAB2Q5VUJ9 269 aa8.59□□□□□ -1.03
RTL9-203ENST00000540313 ZBTB7CA1YPR0 619 aa8.58□□□□□ -1.04
RTL9-203ENST00000540313 TRIM44Q96DX7 344 aaPredicted RBP8.58□□□□□ -1.04
RTL9-203ENST00000540313 RBM19Q9Y4C8 960 aaKnown RBP8.58□□□□□ -1.04
RTL9-203ENST00000540313 LAS1LQ9Y4W2 734 aaKnown RBP8.58□□□□□ -1.04
RTL9-203ENST00000540313 TOP2AP11388 1531 aaKnown RBP8.57□□□□□ -1.04
RTL9-203ENST00000540313 POGKQ9P215 609 aa8.57□□□□□ -1.04
RTL9-203ENST00000540313 SIN3AQ96ST3 1273 aa8.57□□□□□ -1.04
RTL9-203ENST00000540313 ERICH6BQ5W0A0 696 aa8.57□□□□□ -1.04
RTL9-203ENST00000540313 WIZO95785 1651 aa8.56□□□□□ -1.04
RTL9-203ENST00000540313 HMGXB3Q12766 1538 aa8.56□□□□□ -1.04
RTL9-203ENST00000540313 RTN4Q9NQC3 1192 aaKnown RBP8.56□□□□□ -1.04
RTL9-203ENST00000540313 CCER2I3L3R5 266 aa8.56□□□□□ -1.04
RTL9-203ENST00000540313 DEKP35659 375 aaKnown RBP8.55□□□□□ -1.04
RTL9-203ENST00000540313 MLECQ14165 292 aa8.55□□□□□ -1.04
RTL9-203ENST00000540313 B4GALNT3Q6L9W6 998 aa8.55□□□□□ -1.04
RTL9-203ENST00000540313 EID1Q9Y6B2 187 aa8.55□□□□□ -1.04
RTL9-203ENST00000540313 RSPH4AQ5TD94 716 aa8.55□□□□□ -1.04
RTL9-203ENST00000540313 CFAP53Q96M91 514 aa8.55□□□□□ -1.04
RTL9-203ENST00000540313 MYH16Q9H6N6 1097 aa8.55□□□□□ -1.04
RTL9-203ENST00000540313 SENP3-EIF4A1A0A087X0R7 540 aa8.54□□□□□ -1.04
RTL9-203ENST00000540313 FANCD2Q9BXW9 1451 aa8.54□□□□□ -1.04
RTL9-203ENST00000540313 GOLGA6L22H0YM25 854 aa8.54□□□□□ -1.04
RTL9-203ENST00000540313 FMN1Q68DA7 1419 aa8.53□□□□□ -1.04
RTL9-203ENST00000540313 CCDC88BA6NC98 1476 aa8.52□□□□□ -1.04
RTL9-203ENST00000540313 TSHZ2Q9NRE2 1034 aa8.52□□□□□ -1.04
RTL9-203ENST00000540313 TIMELESSQ9UNS1 1208 aa8.52□□□□□ -1.05
RTL9-203ENST00000540313 TDRD9Q8NDG6 1382 aaKnown RBP8.51□□□□□ -1.05
RTL9-203ENST00000540313 LMOD2Q6P5Q4 547 aa8.51□□□□□ -1.05
RTL9-203ENST00000540313 NAP1L5Q96NT1 182 aaPredicted RBP8.51□□□□□ -1.05
RTL9-203ENST00000540313 CARD11Q9BXL7 1154 aa8.5□□□□□ -1.05
RTL9-203ENST00000540313 NCLP19338 710 aaKnown RBP8.5□□□□□ -1.05
RTL9-203ENST00000540313 PNNQ9H307 717 aaKnown RBP8.5□□□□□ -1.05
RTL9-203ENST00000540313 PEG3Q9GZU2 1588 aa8.49□□□□□ -1.05
RTL9-203ENST00000540313 NPHP1O15259 732 aa8.49□□□□□ -1.05
RTL9-203ENST00000540313 FOXD1Q16676 465 aa8.49□□□□□ -1.05
RTL9-203ENST00000540313 CYB5RLQ6IPT4 315 aa8.49□□□□□ -1.05
RTL9-203ENST00000540313 KNSTRNQ9Y448 316 aa8.49□□□□□ -1.05
RTL9-203ENST00000540313 RGS3P49796 1198 aa8.48□□□□□ -1.05
RTL9-203ENST00000540313 JPH4Q96JJ6 628 aa8.48□□□□□ -1.05
RTL9-203ENST00000540313 PRKCSHP14314 528 aaPredicted RBP8.47□□□□□ -1.05
RTL9-203ENST00000540313 VPS8Q8N3P4 1428 aa8.47□□□□□ -1.05
RTL9-203ENST00000540313 NUDCQ9Y266 331 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms