RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 TSPYL2Q9H2G4 693 aaPredicted RBP9.24□□□□□ -0.93
C2CD3-214ENST00000540057 MS4A3Q96HJ5 214 aa9.21□□□□□ -0.94
C2CD3-214ENST00000540057 NUBP1P53384 320 aa9.2□□□□□ -0.94
C2CD3-214ENST00000540057 DCBLD2Q96PD2 775 aa9.2□□□□□ -0.94
C2CD3-214ENST00000540057 FBXO3Q9UK99 471 aa9.19□□□□□ -0.94
C2CD3-214ENST00000540057 KIF12Q96FN5 646 aa9.17□□□□□ -0.94
C2CD3-214ENST00000540057 ZBTB47Q9UFB7 747 aaPredicted RBP9.16□□□□□ -0.94
C2CD3-214ENST00000540057 VASPP50552 380 aaPredicted RBP9.15□□□□□ -0.94
C2CD3-214ENST00000540057 LHX8Q68G74 356 aa9.14□□□□□ -0.95
C2CD3-214ENST00000540057 PELP1Q8IZL8 1130 aaKnown RBP9.12□□□□□ -0.95
C2CD3-214ENST00000540057 MAP3K13O43283 966 aa9.11□□□□□ -0.95
C2CD3-214ENST00000540057 ASTLQ6HA08 431 aaPredicted RBP9.1□□□□□ -0.95
C2CD3-214ENST00000540057 TRPC6Q9Y210 931 aa9.1□□□□□ -0.95
C2CD3-214ENST00000540057 ATMINO43313 823 aaPredicted RBP9.09□□□□□ -0.95
C2CD3-214ENST00000540057 FAM212AQ96EL1 285 aa9.07□□□□□ -0.96
C2CD3-214ENST00000540057 RB1CC1Q8TDY2 1594 aa9.05□□□□□ -0.96
C2CD3-214ENST00000540057 BMP2KQ9NSY1 1161 aaPredicted RBP9.05□□□□□ -0.96
C2CD3-214ENST00000540057 ATN1P54259 1190 aaPredicted RBP9.03□□□□□ -0.96
C2CD3-214ENST00000540057 POTEB2H3BUK9 544 aa9.02□□□□□ -0.97
C2CD3-214ENST00000540057 SGIP1Q9BQI5 828 aa9.02□□□□□ -0.97
C2CD3-214ENST00000540057 TIE1P35590 1138 aa9.01□□□□□ -0.97
C2CD3-214ENST00000540057 PCDHB13Q9Y5F0 798 aa9.01□□□□□ -0.97
C2CD3-214ENST00000540057 IFNL1Q8IU54 200 aa9□□□□□ -0.97
C2CD3-214ENST00000540057 IFNLR1Q8IU57 520 aaPredicted RBP9□□□□□ -0.97
C2CD3-214ENST00000540057 METRNQ9UJH8 293 aa9□□□□□ -0.97
C2CD3-214ENST00000540057 DCAF8Q5TAQ9 597 aa8.99□□□□□ -0.97
C2CD3-214ENST00000540057 KLHL34Q8N239 644 aa8.99□□□□□ -0.97
C2CD3-214ENST00000540057 TTLL13PA6NNM8 815 aa8.98□□□□□ -0.97
C2CD3-214ENST00000540057 SLC39A7Q92504 469 aa8.98□□□□□ -0.97
C2CD3-214ENST00000540057 C7P10643 843 aa8.97□□□□□ -0.97
C2CD3-214ENST00000540057 PYGBP11216 843 aa8.97□□□□□ -0.97
C2CD3-214ENST00000540057 POTEFA5A3E0 1075 aa8.95□□□□□ -0.98
C2CD3-214ENST00000540057 DNAJC5Q9H3Z4 198 aa8.95□□□□□ -0.98
C2CD3-214ENST00000540057 POTEJP0CG39 1038 aa8.94□□□□□ -0.98
C2CD3-214ENST00000540057 OTUD5Q96G74 571 aa8.94□□□□□ -0.98
C2CD3-214ENST00000540057 GSE1Q14687 1217 aa8.92□□□□□ -0.98
C2CD3-214ENST00000540057 SPOCK2Q92563 424 aa8.92□□□□□ -0.98
C2CD3-214ENST00000540057 TRIM35Q9UPQ4 493 aa8.91□□□□□ -0.98
C2CD3-214ENST00000540057 PCDHB8Q9UN66 801 aa8.9□□□□□ -0.98
C2CD3-214ENST00000540057 NACADO15069 1562 aa8.9□□□□□ -0.99
C2CD3-214ENST00000540057 TMEM106CQ9BVX2 250 aa8.89□□□□□ -0.99
C2CD3-214ENST00000540057 UNC13AQ9UPW8 1703 aa8.88□□□□□ -0.99
C2CD3-214ENST00000540057 COLQQ9Y215 455 aaPredicted RBP8.88□□□□□ -0.99
C2CD3-214ENST00000540057 CHRM1P11229 460 aaPredicted RBP8.87□□□□□ -0.99
C2CD3-214ENST00000540057 IER5LQ5T953 404 aa8.86□□□□□ -0.99
C2CD3-214ENST00000540057 BICRAQ9NZM4 1560 aa8.83□□□□□ -1
C2CD3-214ENST00000540057 ZNF467Q7Z7K2 595 aaPredicted RBP8.83□□□□□ -1
C2CD3-214ENST00000540057 CIZ1Q9ULV3 898 aaPredicted RBP8.82□□□□□ -1
C2CD3-214ENST00000540057 IRX5P78411 483 aaPredicted RBP8.8□□□□□ -1
C2CD3-214ENST00000540057 SEC24BO95487 1268 aa8.79□□□□□ -1
C2CD3-214ENST00000540057 MAMSTRQ6ZN01 415 aa8.78□□□□□ -1
C2CD3-214ENST00000540057 DCAF8L2P0C7V8 631 aa8.77□□□□□ -1.01
C2CD3-214ENST00000540057 CECR2Q9BXF3 1484 aa8.77□□□□□ -1.01
C2CD3-214ENST00000540057 PSEN1P49768 467 aa8.76□□□□□ -1.01
C2CD3-214ENST00000540057 SCUBE2Q9NQ36 999 aa8.75□□□□□ -1.01
C2CD3-214ENST00000540057 CC2D2AQ9P2K1 1620 aa8.74□□□□□ -1.01
C2CD3-214ENST00000540057 PLCG2P16885 1265 aa8.74□□□□□ -1.01
C2CD3-214ENST00000540057 PDAP1Q13442 181 aaKnown RBP8.73□□□□□ -1.01
C2CD3-214ENST00000540057 TRIM41Q8WV44 630 aa8.72□□□□□ -1.01
C2CD3-214ENST00000540057 OCEL1Q9H607 264 aa8.72□□□□□ -1.01
C2CD3-214ENST00000540057 PDCD7Q8N8D1 485 aaKnown RBP8.71□□□□□ -1.02
C2CD3-214ENST00000540057 RNF25Q96BH1 459 aaPredicted RBP8.7□□□□□ -1.02
C2CD3-214ENST00000540057 LCE2DQ5TA82 110 aaPredicted RBP8.68□□□□□ -1.02
C2CD3-214ENST00000540057 ILDR1Q86SU0 546 aaPredicted RBP8.68□□□□□ -1.02
C2CD3-214ENST00000540057 MKRN3Q13064 507 aaKnown RBP8.66□□□□□ -1.02
C2CD3-214ENST00000540057 MYO15BQ96JP2 1530 aa8.65□□□□□ -1.02
C2CD3-214ENST00000540057 GOLGA2Q08379 1002 aa8.65□□□□□ -1.02
C2CD3-214ENST00000540057 CABP2Q9NPB3 220 aa8.65□□□□□ -1.02
C2CD3-214ENST00000540057 SHROOM4Q9ULL8 1493 aa8.64□□□□□ -1.03
C2CD3-214ENST00000540057 RIOK3O14730 519 aaKnown RBP8.63□□□□□ -1.03
C2CD3-214ENST00000540057 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.63□□□□□ -1.03
C2CD3-214ENST00000540057 EIF4G1Q04637 1599 aaKnown RBP8.63□□□□□ -1.03
C2CD3-214ENST00000540057 SLAIN1Q8ND83 568 aa8.61□□□□□ -1.03
C2CD3-214ENST00000540057 POTEMA6NI47 508 aa8.6□□□□□ -1.03
C2CD3-214ENST00000540057 DPY19L2Q6NUT2 758 aa8.59□□□□□ -1.03
C2CD3-214ENST00000540057 POTEGQ6S5H5 508 aa8.59□□□□□ -1.03
C2CD3-214ENST00000540057 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.58□□□□□ -1.04
C2CD3-214ENST00000540057 ZFP91Q96JP5 570 aaPredicted RBP8.58□□□□□ -1.04
C2CD3-214ENST00000540057 VGFO15240 615 aaPredicted RBP8.57□□□□□ -1.04
C2CD3-214ENST00000540057 PKD2Q13563 968 aa8.57□□□□□ -1.04
C2CD3-214ENST00000540057 EFCAB3Q8N7B9 438 aa8.57□□□□□ -1.04
C2CD3-214ENST00000540057 FAM163AQ96GL9 167 aaPredicted RBP8.57□□□□□ -1.04
C2CD3-214ENST00000540057 L3MBTL3Q96JM7 780 aaPredicted RBP8.56□□□□□ -1.04
C2CD3-214ENST00000540057 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.55□□□□□ -1.04
C2CD3-214ENST00000540057 ECM2O94769 699 aaPredicted RBP8.52□□□□□ -1.05
C2CD3-214ENST00000540057 C3orf67Q6ZVT6 689 aa8.52□□□□□ -1.05
C2CD3-214ENST00000540057 MS4A4AQ96JQ5 239 aa8.51□□□□□ -1.05
C2CD3-214ENST00000540057 CUX2O14529 1486 aa8.51□□□□□ -1.05
C2CD3-214ENST00000540057 RGL2O15211 777 aa8.5□□□□□ -1.05
C2CD3-214ENST00000540057 ST18O60284 1047 aa8.5□□□□□ -1.05
C2CD3-214ENST00000540057 BOLA1Q9Y3E2 137 aa8.5□□□□□ -1.05
C2CD3-214ENST00000540057 TMEM121BQ9BXQ6 578 aaPredicted RBP8.49□□□□□ -1.05
C2CD3-214ENST00000540057 BCL11BQ9C0K0 894 aaPredicted RBP8.49□□□□□ -1.05
C2CD3-214ENST00000540057 SOX12O15370 315 aa8.48□□□□□ -1.05
C2CD3-214ENST00000540057 PHF8Q9UPP1 1060 aa8.48□□□□□ -1.05
C2CD3-214ENST00000540057 SCRIBQ14160 1630 aa8.47□□□□□ -1.05
C2CD3-214ENST00000540057 FBXO22Q8NEZ5 403 aa8.45□□□□□ -1.06
C2CD3-214ENST00000540057 MICALL2Q8IY33 904 aa8.44□□□□□ -1.06
C2CD3-214ENST00000540057 TAOK2Q9UL54 1235 aa8.44□□□□□ -1.06
C2CD3-214ENST00000540057 STK24Q9Y6E0 443 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms