RNA–Protein interactions for RNA: ENST00000539523.1

LMNTD1-206, Transcript of lamin tail domain containing 1, humanhuman

TSL 3

Gene LMNTD1, Length 454 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-206ENST00000539523 CHADLQ6NUI6 762 aa14.27□□□□□ -0.13
LMNTD1-206ENST00000539523 RNF25Q96BH1 459 aaPredicted RBP14.27□□□□□ -0.13
LMNTD1-206ENST00000539523 PAXIP1Q6ZW49 1069 aaPredicted RBP14.26□□□□□ -0.13
LMNTD1-206ENST00000539523 TAOK2Q9UL54 1235 aa14.25□□□□□ -0.13
LMNTD1-206ENST00000539523 RIOK3O14730 519 aaKnown RBP14.24□□□□□ -0.13
LMNTD1-206ENST00000539523 CFAP44Q96MT7 982 aa14.24□□□□□ -0.13
LMNTD1-206ENST00000539523 HS6ST3Q8IZP7 471 aa14.21□□□□□ -0.13
LMNTD1-206ENST00000539523 CHRM1P11229 460 aaPredicted RBP14.19□□□□□ -0.14
LMNTD1-206ENST00000539523 FARP1Q9Y4F1 1045 aaPredicted RBP14.19□□□□□ -0.14
LMNTD1-206ENST00000539523 PRKAR2AP13861 404 aaKnown RBP14.18□□□□□ -0.14
LMNTD1-206ENST00000539523 SPRYD3Q8NCJ5 442 aa14.18□□□□□ -0.14
LMNTD1-206ENST00000539523 PYGBP11216 843 aa14.16□□□□□ -0.14
LMNTD1-206ENST00000539523 VGFO15240 615 aaPredicted RBP14.14□□□□□ -0.15
LMNTD1-206ENST00000539523 TSPYL2Q9H2G4 693 aaPredicted RBP14.13□□□□□ -0.15
LMNTD1-206ENST00000539523 FXR2P51116 673 aaKnown RBP eCLIP14.12□□□□□ -0.15
LMNTD1-206ENST00000539523 VSIG10Q8N0Z9 540 aa14.11□□□□□ -0.15
LMNTD1-206ENST00000539523 STK25O00506 426 aa14.1□□□□□ -0.15
LMNTD1-206ENST00000539523 CHRDL2Q6WN34 429 aa14.1□□□□□ -0.15
LMNTD1-206ENST00000539523 DNAJC5Q9H3Z4 198 aa14.06□□□□□ -0.16
LMNTD1-206ENST00000539523 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.02□□□□□ -0.17
LMNTD1-206ENST00000539523 PIP4P2Q8N4L2 257 aa14.02□□□□□ -0.17
LMNTD1-206ENST00000539523 ZFP91Q96JP5 570 aaPredicted RBP14.02□□□□□ -0.17
LMNTD1-206ENST00000539523 SGIP1Q9BQI5 828 aa14.02□□□□□ -0.17
LMNTD1-206ENST00000539523 PAK3O75914 559 aaPredicted RBP14.01□□□□□ -0.17
LMNTD1-206ENST00000539523 ZNF467Q7Z7K2 595 aaPredicted RBP14□□□□□ -0.17
LMNTD1-206ENST00000539523 BCL11BQ9C0K0 894 aaPredicted RBP14□□□□□ -0.17
LMNTD1-206ENST00000539523 STK24Q9Y6E0 443 aa14□□□□□ -0.17
LMNTD1-206ENST00000539523 TSHZ2Q9NRE2 1034 aa13.98□□□□□ -0.17
LMNTD1-206ENST00000539523 NKX1-1Q15270 411 aaPredicted RBP13.97□□□□□ -0.17
LMNTD1-206ENST00000539523 CCDC61Q9Y6R9 512 aa13.97□□□□□ -0.17
LMNTD1-206ENST00000539523 KDM2AQ9Y2K7 1162 aa13.94□□□□□ -0.18
LMNTD1-206ENST00000539523 PDAP1Q13442 181 aaKnown RBP13.9□□□□□ -0.18
LMNTD1-206ENST00000539523 GTPBP6O43824 516 aaPredicted RBP13.89□□□□□ -0.19
LMNTD1-206ENST00000539523 RYDENQ9NUL5 291 aaKnown RBP13.89□□□□□ -0.19
LMNTD1-206ENST00000539523 PCDHB8Q9UN66 801 aa13.89□□□□□ -0.19
LMNTD1-206ENST00000539523 PCDHB13Q9Y5F0 798 aa13.89□□□□□ -0.19
LMNTD1-206ENST00000539523 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
LMNTD1-206ENST00000539523 BCANQ96GW7 911 aa13.87□□□□□ -0.19
LMNTD1-206ENST00000539523 CD44P16070 742 aaKnown RBP13.82□□□□□ -0.2
LMNTD1-206ENST00000539523 PSEN1P49768 467 aa13.82□□□□□ -0.2
LMNTD1-206ENST00000539523 ZRANB1Q9UGI0 708 aa13.81□□□□□ -0.2
LMNTD1-206ENST00000539523 MAP3K13O43283 966 aa13.79□□□□□ -0.2
LMNTD1-206ENST00000539523 IFNL1Q8IU54 200 aa13.79□□□□□ -0.2
LMNTD1-206ENST00000539523 KIF12Q96FN5 646 aa13.79□□□□□ -0.2
LMNTD1-206ENST00000539523 PHF12Q96QT6 1004 aa13.72□□□□□ -0.21
LMNTD1-206ENST00000539523 POTEHQ6S545 545 aa13.67□□□□□ -0.22
LMNTD1-206ENST00000539523 CABP2Q9NPB3 220 aa13.66□□□□□ -0.22
LMNTD1-206ENST00000539523 MFRPQ9BY79 579 aa13.64□□□□□ -0.23
LMNTD1-206ENST00000539523 C19orf67A6NJJ6 358 aa13.62□□□□□ -0.23
LMNTD1-206ENST00000539523 EFCAB3Q8N7B9 438 aa13.62□□□□□ -0.23
LMNTD1-206ENST00000539523 NBR1Q14596 966 aa13.59□□□□□ -0.23
LMNTD1-206ENST00000539523 SOX12O15370 315 aa13.58□□□□□ -0.24
LMNTD1-206ENST00000539523 NLRP6P59044 892 aa13.58□□□□□ -0.24
LMNTD1-206ENST00000539523 MS4A3Q96HJ5 214 aa13.57□□□□□ -0.24
LMNTD1-206ENST00000539523 GOLGA2Q08379 1002 aa13.56□□□□□ -0.24
LMNTD1-206ENST00000539523 TMEM106CQ9BVX2 250 aa13.55□□□□□ -0.24
LMNTD1-206ENST00000539523 PHF8Q9UPP1 1060 aa13.54□□□□□ -0.24
LMNTD1-206ENST00000539523 FBXO22Q8NEZ5 403 aa13.53□□□□□ -0.24
LMNTD1-206ENST00000539523 CADPS2Q86UW7 1296 aa13.49□□□□□ -0.25
LMNTD1-206ENST00000539523 TRPC6Q9Y210 931 aa13.49□□□□□ -0.25
LMNTD1-206ENST00000539523 WDR70Q9NW82 654 aa13.48□□□□□ -0.25
LMNTD1-206ENST00000539523 PPP1R37O75864 691 aa13.47□□□□□ -0.25
LMNTD1-206ENST00000539523 HAX1O00165 279 aa13.46□□□□□ -0.25
LMNTD1-206ENST00000539523 TIE1P35590 1138 aa13.45□□□□□ -0.26
LMNTD1-206ENST00000539523 MKRN3Q13064 507 aaKnown RBP13.45□□□□□ -0.26
LMNTD1-206ENST00000539523 P3H3Q8IVL6 736 aa13.45□□□□□ -0.26
LMNTD1-206ENST00000539523 PRKCSHP14314 528 aaPredicted RBP13.41□□□□□ -0.26
LMNTD1-206ENST00000539523 TTLL13PA6NNM8 815 aa13.4□□□□□ -0.26
LMNTD1-206ENST00000539523 TPRNQ4KMQ1 711 aa13.4□□□□□ -0.26
LMNTD1-206ENST00000539523 MS4A4AQ96JQ5 239 aa13.39□□□□□ -0.27
LMNTD1-206ENST00000539523 GALR2O43603 387 aaPredicted RBP13.38□□□□□ -0.27
LMNTD1-206ENST00000539523 CLCN6P51797 869 aa13.37□□□□□ -0.27
LMNTD1-206ENST00000539523 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
LMNTD1-206ENST00000539523 KCNV2Q8TDN2 545 aa13.34□□□□□ -0.27
LMNTD1-206ENST00000539523 TRIM35Q9UPQ4 493 aa13.33□□□□□ -0.28
LMNTD1-206ENST00000539523 EVX2Q03828 476 aa13.32□□□□□ -0.28
LMNTD1-206ENST00000539523 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.32□□□□□ -0.28
LMNTD1-206ENST00000539523 NCKAP5LQ9HCH0 1330 aa13.25□□□□□ -0.29
LMNTD1-206ENST00000539523 PDE4AP27815 886 aa13.25□□□□□ -0.29
LMNTD1-206ENST00000539523 E2F4Q16254 413 aa13.25□□□□□ -0.29
LMNTD1-206ENST00000539523 LARP6Q9BRS8 491 aaKnown RBP13.25□□□□□ -0.29
LMNTD1-206ENST00000539523 ILDR1Q86SU0 546 aaPredicted RBP13.24□□□□□ -0.29
LMNTD1-206ENST00000539523 ATN1P54259 1190 aaPredicted RBP13.22□□□□□ -0.29
LMNTD1-206ENST00000539523 CRISPLD2Q9H0B8 497 aa13.22□□□□□ -0.29
LMNTD1-206ENST00000539523 ARHGEF1Q92888 912 aaKnown RBP13.2□□□□□ -0.3
LMNTD1-206ENST00000539523 DDX27Q96GQ7 796 aaKnown RBP13.2□□□□□ -0.3
LMNTD1-206ENST00000539523 ATMINO43313 823 aaPredicted RBP13.19□□□□□ -0.3
LMNTD1-206ENST00000539523 MFSD10Q14728 455 aa13.19□□□□□ -0.3
LMNTD1-206ENST00000539523 ASTLQ6HA08 431 aaPredicted RBP13.18□□□□□ -0.3
LMNTD1-206ENST00000539523 IER5LQ5T953 404 aa13.15□□□□□ -0.3
LMNTD1-206ENST00000539523 NISCHQ9Y2I1 1504 aa13.14□□□□□ -0.31
LMNTD1-206ENST00000539523 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
LMNTD1-206ENST00000539523 PDCD7Q8N8D1 485 aaKnown RBP13.14□□□□□ -0.31
LMNTD1-206ENST00000539523 TULP1O00294 542 aaPredicted RBP13.12□□□□□ -0.31
LMNTD1-206ENST00000539523 GABBR2O75899 941 aa13.12□□□□□ -0.31
LMNTD1-206ENST00000539523 IRX5P78411 483 aaPredicted RBP13.12□□□□□ -0.31
LMNTD1-206ENST00000539523 MICALL2Q8IY33 904 aa13.12□□□□□ -0.31
LMNTD1-206ENST00000539523 OCEL1Q9H607 264 aa13.12□□□□□ -0.31
LMNTD1-206ENST00000539523 G3V3G9 751 aa13.11□□□□□ -0.31
LMNTD1-206ENST00000539523 PLCG2P16885 1265 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms