RNA–Protein interactions for RNA: ENST00000539369.1

LDHC-206, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-206ENST00000539369 ATMINO43313 823 aaPredicted RBP13.53□□□□□ -0.24
LDHC-206ENST00000539369 METRNQ9UJH8 293 aa13.52□□□□□ -0.25
LDHC-206ENST00000539369 POTEGQ6S5H5 508 aa13.48□□□□□ -0.25
LDHC-206ENST00000539369 PROM2Q8N271 834 aa13.46□□□□□ -0.25
LDHC-206ENST00000539369 C7P10643 843 aa13.45□□□□□ -0.26
LDHC-206ENST00000539369 SLC39A7Q92504 469 aa13.45□□□□□ -0.26
LDHC-206ENST00000539369 TSPYL2Q9H2G4 693 aaPredicted RBP13.43□□□□□ -0.26
LDHC-206ENST00000539369 CCDC61Q9Y6R9 512 aa13.43□□□□□ -0.26
LDHC-206ENST00000539369 ATN1P54259 1190 aaPredicted RBP13.4□□□□□ -0.26
LDHC-206ENST00000539369 LCE2DQ5TA82 110 aaPredicted RBP13.38□□□□□ -0.27
LDHC-206ENST00000539369 KIF12Q96FN5 646 aa13.36□□□□□ -0.27
LDHC-206ENST00000539369 TRPC6Q9Y210 931 aa13.36□□□□□ -0.27
LDHC-206ENST00000539369 POTEFA5A3E0 1075 aa13.35□□□□□ -0.27
LDHC-206ENST00000539369 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
LDHC-206ENST00000539369 MAMSTRQ6ZN01 415 aa13.31□□□□□ -0.28
LDHC-206ENST00000539369 MAP3K13O43283 966 aa13.27□□□□□ -0.29
LDHC-206ENST00000539369 RASEFQ8IZ41 740 aa13.25□□□□□ -0.29
LDHC-206ENST00000539369 PCDH10Q9P2E7 1040 aa13.25□□□□□ -0.29
LDHC-206ENST00000539369 SCUBE2Q9NQ36 999 aa13.24□□□□□ -0.29
LDHC-206ENST00000539369 FAM163AQ96GL9 167 aaPredicted RBP13.23□□□□□ -0.29
LDHC-206ENST00000539369 TIE1P35590 1138 aa13.21□□□□□ -0.29
LDHC-206ENST00000539369 COLQQ9Y215 455 aaPredicted RBP13.19□□□□□ -0.3
LDHC-206ENST00000539369 TTLL13PA6NNM8 815 aa13.17□□□□□ -0.3
LDHC-206ENST00000539369 MIER1Q8N108 512 aa13.17□□□□□ -0.3
LDHC-206ENST00000539369 PLEKHG5O94827 1062 aa13.09□□□□□ -0.31
LDHC-206ENST00000539369 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
LDHC-206ENST00000539369 SEC24BO95487 1268 aa13.06□□□□□ -0.32
LDHC-206ENST00000539369 PCDHB13Q9Y5F0 798 aa13.04□□□□□ -0.32
LDHC-206ENST00000539369 NUBP1P53384 320 aa13.03□□□□□ -0.32
LDHC-206ENST00000539369 SGIP1Q9BQI5 828 aa13.03□□□□□ -0.32
LDHC-206ENST00000539369 IER5LQ5T953 404 aa13.02□□□□□ -0.33
LDHC-206ENST00000539369 IFNL1Q8IU54 200 aa13□□□□□ -0.33
LDHC-206ENST00000539369 PLCD3Q8N3E9 789 aa12.99□□□□□ -0.33
LDHC-206ENST00000539369 CDAN1Q8IWY9 1227 aa12.96□□□□□ -0.33
LDHC-206ENST00000539369 SLAIN1Q8ND83 568 aa12.92□□□□□ -0.34
LDHC-206ENST00000539369 TMEM106CQ9BVX2 250 aa12.92□□□□□ -0.34
LDHC-206ENST00000539369 ST18O60284 1047 aa12.91□□□□□ -0.34
LDHC-206ENST00000539369 IRX5P78411 483 aaPredicted RBP12.88□□□□□ -0.35
LDHC-206ENST00000539369 ZBTB47Q9UFB7 747 aaPredicted RBP12.88□□□□□ -0.35
LDHC-206ENST00000539369 FAM212AQ96EL1 285 aa12.86□□□□□ -0.35
LDHC-206ENST00000539369 PLCG2P16885 1265 aa12.84□□□□□ -0.35
LDHC-206ENST00000539369 PYGBP11216 843 aa12.76□□□□□ -0.37
LDHC-206ENST00000539369 OCEL1Q9H607 264 aa12.76□□□□□ -0.37
LDHC-206ENST00000539369 PCDHB8Q9UN66 801 aa12.73□□□□□ -0.37
LDHC-206ENST00000539369 DCAF8Q5TAQ9 597 aa12.71□□□□□ -0.37
LDHC-206ENST00000539369 FKBP8Q14318 412 aa12.7□□□□□ -0.38
LDHC-206ENST00000539369 TMEM121BQ9BXQ6 578 aaPredicted RBP12.68□□□□□ -0.38
LDHC-206ENST00000539369 MMRN1Q13201 1228 aa12.67□□□□□ -0.38
LDHC-206ENST00000539369 SPNS2Q8IVW8 549 aa12.67□□□□□ -0.38
LDHC-206ENST00000539369 MARVELD3Q96A59 401 aa12.67□□□□□ -0.38
LDHC-206ENST00000539369 PDCD7Q8N8D1 485 aaKnown RBP12.65□□□□□ -0.38
LDHC-206ENST00000539369 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.65□□□□□ -0.38
LDHC-206ENST00000539369 SNPHO15079 494 aa12.62□□□□□ -0.39
LDHC-206ENST00000539369 POTEB3A0JP26 581 aa12.53□□□□□ -0.4
LDHC-206ENST00000539369 POTEBQ6S5H4 581 aa12.53□□□□□ -0.4
LDHC-206ENST00000539369 C3orf67Q6ZVT6 689 aa12.5□□□□□ -0.41
LDHC-206ENST00000539369 ZNF467Q7Z7K2 595 aaPredicted RBP12.5□□□□□ -0.41
LDHC-206ENST00000539369 KRTAP3-3Q9BYR6 98 aa12.49□□□□□ -0.41
LDHC-206ENST00000539369 KRTAP3-2Q9BYR7 98 aa12.49□□□□□ -0.41
LDHC-206ENST00000539369 EMP3P54852 163 aa12.48□□□□□ -0.41
LDHC-206ENST00000539369 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
LDHC-206ENST00000539369 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
LDHC-206ENST00000539369 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
LDHC-206ENST00000539369 CHRM1P11229 460 aaPredicted RBP12.46□□□□□ -0.41
LDHC-206ENST00000539369 GSE1Q14687 1217 aa12.46□□□□□ -0.41
LDHC-206ENST00000539369 ILDR1Q86SU0 546 aaPredicted RBP12.46□□□□□ -0.41
LDHC-206ENST00000539369 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.46□□□□□ -0.41
LDHC-206ENST00000539369 PSEN1P49768 467 aa12.45□□□□□ -0.42
LDHC-206ENST00000539369 GOLGA2Q08379 1002 aa12.45□□□□□ -0.42
LDHC-206ENST00000539369 HS3ST6Q96QI5 342 aa12.45□□□□□ -0.42
LDHC-206ENST00000539369 VASPP50552 380 aaPredicted RBP12.43□□□□□ -0.42
LDHC-206ENST00000539369 DPY19L2Q6NUT2 758 aa12.43□□□□□ -0.42
LDHC-206ENST00000539369 FAM205CA6NFA0 338 aa12.42□□□□□ -0.42
LDHC-206ENST00000539369 KLHL34Q8N239 644 aa12.42□□□□□ -0.42
LDHC-206ENST00000539369 HOXB3P14651 431 aaPredicted RBP12.36□□□□□ -0.43
LDHC-206ENST00000539369 PDAP1Q13442 181 aaKnown RBP12.33□□□□□ -0.44
LDHC-206ENST00000539369 CABP2Q9NPB3 220 aa12.31□□□□□ -0.44
LDHC-206ENST00000539369 BOLA1Q9Y3E2 137 aa12.3□□□□□ -0.44
LDHC-206ENST00000539369 HOXB1P14653 301 aaPredicted RBP12.24□□□□□ -0.45
LDHC-206ENST00000539369 IFNLR1Q8IU57 520 aaPredicted RBP12.22□□□□□ -0.45
LDHC-206ENST00000539369 CIZ1Q9ULV3 898 aaPredicted RBP12.19□□□□□ -0.46
LDHC-206ENST00000539369 G3V3G9 751 aa12.18□□□□□ -0.46
LDHC-206ENST00000539369 SPOCK2Q92563 424 aa12.18□□□□□ -0.46
LDHC-206ENST00000539369 ZNF710Q8N1W2 664 aa12.17□□□□□ -0.46
LDHC-206ENST00000539369 ERBB3P21860 1342 aa12.16□□□□□ -0.46
LDHC-206ENST00000539369 DOK7Q18PE1 504 aa12.16□□□□□ -0.46
LDHC-206ENST00000539369 TMEM92Q6UXU6 159 aa12.14□□□□□ -0.47
LDHC-206ENST00000539369 EFCAB3Q8N7B9 438 aa12.13□□□□□ -0.47
LDHC-206ENST00000539369 VARS2Q5ST30 1063 aaKnown RBP12.1□□□□□ -0.47
LDHC-206ENST00000539369 RNF166Q96A37 237 aaPredicted RBP12.08□□□□□ -0.48
LDHC-206ENST00000539369 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
LDHC-206ENST00000539369 NISCHQ9Y2I1 1504 aa12.06□□□□□ -0.48
LDHC-206ENST00000539369 RIMBP2O15034 1052 aa12.04□□□□□ -0.48
LDHC-206ENST00000539369 GPR153Q6NV75 609 aa12.04□□□□□ -0.48
LDHC-206ENST00000539369 ZNF687Q8N1G0 1237 aa12.02□□□□□ -0.49
LDHC-206ENST00000539369 MS4A4AQ96JQ5 239 aa12.02□□□□□ -0.49
LDHC-206ENST00000539369 MYT1LQ9UL68 1186 aa12.02□□□□□ -0.49
LDHC-206ENST00000539369 ZSWIM6Q9HCJ5 1215 aa12.01□□□□□ -0.49
LDHC-206ENST00000539369 RNF25Q96BH1 459 aaPredicted RBP11.96□□□□□ -0.49
LDHC-206ENST00000539369 TRIM41Q8WV44 630 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms