RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 ERICH6Q7L0X2 663 aa17.44■□□□□ 0.38
CD9-207ENST00000538418 NKX1-1Q15270 411 aaPredicted RBP17.41■□□□□ 0.38
CD9-207ENST00000538418 GSE1Q14687 1217 aa17.4■□□□□ 0.38
CD9-207ENST00000538418 GTPBP6O43824 516 aaPredicted RBP17.38■□□□□ 0.37
CD9-207ENST00000538418 ARXQ96QS3 562 aa17.34■□□□□ 0.37
CD9-207ENST00000538418 DSG3P32926 999 aa17.33■□□□□ 0.36
CD9-207ENST00000538418 TMEM132AQ24JP5 1023 aa17.33■□□□□ 0.36
CD9-207ENST00000538418 RIOK3O14730 519 aaKnown RBP17.3■□□□□ 0.36
CD9-207ENST00000538418 NUBP1P53384 320 aa17.22■□□□□ 0.35
CD9-207ENST00000538418 STK25O00506 426 aa17.21■□□□□ 0.35
CD9-207ENST00000538418 DCAF8Q5TAQ9 597 aa17.19■□□□□ 0.34
CD9-207ENST00000538418 VGFO15240 615 aaPredicted RBP17.17■□□□□ 0.34
CD9-207ENST00000538418 DAXXQ9UER7 740 aaPredicted RBP17.15■□□□□ 0.34
CD9-207ENST00000538418 RYDENQ9NUL5 291 aaKnown RBP17.12■□□□□ 0.33
CD9-207ENST00000538418 P3H3Q8IVL6 736 aa17.1■□□□□ 0.33
CD9-207ENST00000538418 SGIP1Q9BQI5 828 aa17.07■□□□□ 0.32
CD9-207ENST00000538418 C14orf37Q86TY3 774 aa17.06■□□□□ 0.32
CD9-207ENST00000538418 FAM212AQ96EL1 285 aa17.04■□□□□ 0.32
CD9-207ENST00000538418 STK24Q9Y6E0 443 aa17.03■□□□□ 0.32
CD9-207ENST00000538418 CHRM1P11229 460 aaPredicted RBP17.02■□□□□ 0.32
CD9-207ENST00000538418 BCL11BQ9C0K0 894 aaPredicted RBP17.02■□□□□ 0.32
CD9-207ENST00000538418 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.98■□□□□ 0.31
CD9-207ENST00000538418 ZFP91Q96JP5 570 aaPredicted RBP16.98■□□□□ 0.31
CD9-207ENST00000538418 HOMEZQ8IX15 550 aa16.97■□□□□ 0.31
CD9-207ENST00000538418 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
CD9-207ENST00000538418 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.94■□□□□ 0.3
CD9-207ENST00000538418 WDR70Q9NW82 654 aa16.9■□□□□ 0.3
CD9-207ENST00000538418 KCNV2Q8TDN2 545 aa16.89■□□□□ 0.29
CD9-207ENST00000538418 MNX1P50219 401 aaPredicted RBP16.84■□□□□ 0.29
CD9-207ENST00000538418 RASEFQ8IZ41 740 aa16.82■□□□□ 0.28
CD9-207ENST00000538418 CREBZFQ9NS37 354 aa16.82■□□□□ 0.28
CD9-207ENST00000538418 BRPF1P55201 1214 aaPredicted RBP16.81■□□□□ 0.28
CD9-207ENST00000538418 SPDYE1Q8NFV5 336 aaPredicted RBP16.8■□□□□ 0.28
CD9-207ENST00000538418 CADPS2Q86UW7 1296 aa16.79■□□□□ 0.28
CD9-207ENST00000538418 PYGBP11216 843 aa16.78■□□□□ 0.28
CD9-207ENST00000538418 PRR29P0C7W0 189 aa16.71■□□□□ 0.27
CD9-207ENST00000538418 NISCHQ9Y2I1 1504 aa16.7■□□□□ 0.26
CD9-207ENST00000538418 ZC3H15Q8WU90 426 aaKnown RBP16.67■□□□□ 0.26
CD9-207ENST00000538418 CLEC11AQ9Y240 323 aa16.67■□□□□ 0.26
CD9-207ENST00000538418 NEUROD2Q15784 382 aa16.65■□□□□ 0.26
CD9-207ENST00000538418 ARHGEF1Q92888 912 aaKnown RBP16.63■□□□□ 0.25
CD9-207ENST00000538418 SLC24A3Q9HC58 644 aa16.58■□□□□ 0.24
CD9-207ENST00000538418 SUPT5HO00267 1087 aaKnown RBP16.57■□□□□ 0.24
CD9-207ENST00000538418 ZNF467Q7Z7K2 595 aaPredicted RBP16.57■□□□□ 0.24
CD9-207ENST00000538418 AKT1S1Q96B36 256 aa16.56■□□□□ 0.24
CD9-207ENST00000538418 TESPA1A2RU30 521 aaPredicted RBP16.51■□□□□ 0.23
CD9-207ENST00000538418 PDAP1Q13442 181 aaKnown RBP16.51■□□□□ 0.23
CD9-207ENST00000538418 E2F4Q16254 413 aa16.51■□□□□ 0.23
CD9-207ENST00000538418 MFRPQ9BY79 579 aa16.5■□□□□ 0.23
CD9-207ENST00000538418 SEMA3EO15041 775 aa16.49■□□□□ 0.23
CD9-207ENST00000538418 RBM42Q9BTD8 480 aaKnown RBP16.45■□□□□ 0.22
CD9-207ENST00000538418 ZMYND10O75800 440 aa16.42■□□□□ 0.22
CD9-207ENST00000538418 REM2Q8IYK8 340 aaPredicted RBP16.41■□□□□ 0.22
CD9-207ENST00000538418 PPP1R37O75864 691 aa16.38■□□□□ 0.21
CD9-207ENST00000538418 PCDHB8Q9UN66 801 aa16.38■□□□□ 0.21
CD9-207ENST00000538418 PCDHB13Q9Y5F0 798 aa16.38■□□□□ 0.21
CD9-207ENST00000538418 TSPYL2Q9H2G4 693 aaPredicted RBP16.37■□□□□ 0.21
CD9-207ENST00000538418 SMYD5Q6GMV2 418 aa16.36■□□□□ 0.21
CD9-207ENST00000538418 PSEN1P49768 467 aa16.35■□□□□ 0.21
CD9-207ENST00000538418 BARGINQ6ZT62 677 aa16.29■□□□□ 0.2
CD9-207ENST00000538418 ZNF579Q8NAF0 562 aaKnown RBP16.29■□□□□ 0.2
CD9-207ENST00000538418 NLRP6P59044 892 aa16.28■□□□□ 0.2
CD9-207ENST00000538418 FBXO22Q8NEZ5 403 aa16.28■□□□□ 0.2
CD9-207ENST00000538418 SOX12O15370 315 aa16.23■□□□□ 0.19
CD9-207ENST00000538418 EFCAB3Q8N7B9 438 aa16.22■□□□□ 0.19
CD9-207ENST00000538418 NCKAP5LQ9HCH0 1330 aa16.21■□□□□ 0.19
CD9-207ENST00000538418 CACNB1Q02641 598 aaPredicted RBP16.21■□□□□ 0.19
CD9-207ENST00000538418 PITPNM1O00562 1244 aa16.2■□□□□ 0.18
CD9-207ENST00000538418 POTEDQ86YR6 584 aa16.2■□□□□ 0.18
CD9-207ENST00000538418 AK7Q96M32 723 aa16.2■□□□□ 0.18
CD9-207ENST00000538418 LARP6Q9BRS8 491 aaKnown RBP16.2■□□□□ 0.18
CD9-207ENST00000538418 PHF8Q9UPP1 1060 aa16.2■□□□□ 0.18
CD9-207ENST00000538418 ARIH1Q9Y4X5 557 aaPredicted RBP16.2■□□□□ 0.18
CD9-207ENST00000538418 PDE4AP27815 886 aa16.19■□□□□ 0.18
CD9-207ENST00000538418 PODXL2Q9NZ53 605 aa16.19■□□□□ 0.18
CD9-207ENST00000538418 ZMYND15Q9H091 742 aa16.18■□□□□ 0.18
CD9-207ENST00000538418 CCDC61Q9Y6R9 512 aa16.18■□□□□ 0.18
CD9-207ENST00000538418 MFSD10Q14728 455 aa16.17■□□□□ 0.18
CD9-207ENST00000538418 GPBP1L1Q9HC44 474 aaPredicted RBP16.16■□□□□ 0.18
CD9-207ENST00000538418 UBTFP17480 764 aaKnown RBP16.15■□□□□ 0.18
CD9-207ENST00000538418 CABP2Q9NPB3 220 aa16.15■□□□□ 0.18
CD9-207ENST00000538418 CHADLQ6NUI6 762 aa16.12■□□□□ 0.17
CD9-207ENST00000538418 IL27Q8NEV9 243 aa16.12■□□□□ 0.17
CD9-207ENST00000538418 KRI1Q8N9T8 703 aaKnown RBP16.1■□□□□ 0.17
CD9-207ENST00000538418 RSPH6AQ9H0K4 717 aa16.1■□□□□ 0.17
CD9-207ENST00000538418 FARP1Q9Y4F1 1045 aaPredicted RBP16.1■□□□□ 0.17
CD9-207ENST00000538418 DDX27Q96GQ7 796 aaKnown RBP16.09■□□□□ 0.17
CD9-207ENST00000538418 IFNL1Q8IU54 200 aa16.08■□□□□ 0.16
CD9-207ENST00000538418 GPIHBP1Q8IV16 184 aa16.08■□□□□ 0.16
CD9-207ENST00000538418 CRISPLD2Q9H0B8 497 aa16.08■□□□□ 0.16
CD9-207ENST00000538418 CAMK2BQ13554 666 aa16.07■□□□□ 0.16
CD9-207ENST00000538418 RBM26Q5T8P6 1007 aaKnown RBP16.07■□□□□ 0.16
CD9-207ENST00000538418 KDM4CQ9H3R0 1056 aa16.07■□□□□ 0.16
CD9-207ENST00000538418 MLLT3P42568 568 aaPredicted RBP16■□□□□ 0.15
CD9-207ENST00000538418 TRIM66O15016 1216 aa15.99■□□□□ 0.15
CD9-207ENST00000538418 PDE4DQ08499 809 aa15.98■□□□□ 0.15
CD9-207ENST00000538418 MS4A4AQ96JQ5 239 aa15.97■□□□□ 0.15
CD9-207ENST00000538418 MAP3K13O43283 966 aa15.96■□□□□ 0.15
CD9-207ENST00000538418 RANGAP1P46060 587 aaPredicted RBP15.93■□□□□ 0.14
CD9-207ENST00000538418 TRIM26Q12899 539 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms