RNA–Protein interactions for RNA: ENST00000538118.5

BCAT1-204, Transcript of branched chain amino acid transaminase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BCAT1, Length 4,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAT1-204ENST00000538118 KDM2AQ9Y2K7 1162 aa13.79□□□□□ -0.2
BCAT1-204ENST00000538118 PLEKHD1A6NEE1 506 aa13.78□□□□□ -0.2
BCAT1-204ENST00000538118 ESF1Q9H501 851 aaKnown RBP13.76□□□□□ -0.21
BCAT1-204ENST00000538118 FHAD1B1AJZ9 1412 aa13.76□□□□□ -0.21
BCAT1-204ENST00000538118 CARMIL1Q5VZK9 1371 aa13.75□□□□□ -0.21
BCAT1-204ENST00000538118 CCNB3Q8WWL7 1395 aa13.75□□□□□ -0.21
BCAT1-204ENST00000538118 SALL2Q9Y467 1007 aaPredicted RBP13.75□□□□□ -0.21
BCAT1-204ENST00000538118 ABCC8Q09428 1581 aa13.74□□□□□ -0.21
BCAT1-204ENST00000538118 STAG3Q9UJ98 1225 aa13.74□□□□□ -0.21
BCAT1-204ENST00000538118 VPS8Q8N3P4 1428 aa13.73□□□□□ -0.21
BCAT1-204ENST00000538118 CUX2O14529 1486 aa13.73□□□□□ -0.21
BCAT1-204ENST00000538118 CFDP1Q9UEE9 299 aaPredicted RBP13.73□□□□□ -0.21
BCAT1-204ENST00000538118 CCDC136Q96JN2 1154 aa13.72□□□□□ -0.21
BCAT1-204ENST00000538118 SLC24A1O60721 1099 aa13.71□□□□□ -0.21
BCAT1-204ENST00000538118 NPM2Q86SE8 214 aaKnown RBP13.71□□□□□ -0.22
BCAT1-204ENST00000538118 SMARCA2P51531 1590 aa13.7□□□□□ -0.22
BCAT1-204ENST00000538118 BCL11AQ9H165 835 aa13.69□□□□□ -0.22
BCAT1-204ENST00000538118 WDR43Q15061 677 aaKnown RBP eCLIP13.69□□□□□ -0.22
BCAT1-204ENST00000538118 SIN3AQ96ST3 1273 aa13.68□□□□□ -0.22
BCAT1-204ENST00000538118 TOP2AP11388 1531 aaKnown RBP13.67□□□□□ -0.22
BCAT1-204ENST00000538118 WIZO95785 1651 aa13.67□□□□□ -0.22
BCAT1-204ENST00000538118 KCNH8Q96L42 1107 aa13.67□□□□□ -0.22
BCAT1-204ENST00000538118 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.66□□□□□ -0.22
BCAT1-204ENST00000538118 TIMELESSQ9UNS1 1208 aa13.64□□□□□ -0.23
BCAT1-204ENST00000538118 RGL3Q3MIN7 710 aa13.63□□□□□ -0.23
BCAT1-204ENST00000538118 IRX6P78412 446 aaPredicted RBP13.62□□□□□ -0.23
BCAT1-204ENST00000538118 KANK4Q5T7N3 995 aaPredicted RBP13.6□□□□□ -0.23
BCAT1-204ENST00000538118 UPF2Q9HAU5 1272 aaKnown RBP13.6□□□□□ -0.23
BCAT1-204ENST00000538118 CARD11Q9BXL7 1154 aa13.59□□□□□ -0.23
BCAT1-204ENST00000538118 SETD5Q9C0A6 1442 aa13.57□□□□□ -0.24
BCAT1-204ENST00000538118 ERCC6Q03468 1493 aa13.57□□□□□ -0.24
BCAT1-204ENST00000538118 CDCA8Q53HL2 280 aa13.55□□□□□ -0.24
BCAT1-204ENST00000538118 ARHGAP35Q9NRY4 1499 aa13.55□□□□□ -0.24
BCAT1-204ENST00000538118 EIF5BO60841 1220 aaKnown RBP13.55□□□□□ -0.24
BCAT1-204ENST00000538118 EIF4G1Q04637 1599 aaKnown RBP13.54□□□□□ -0.24
BCAT1-204ENST00000538118 HSP90AA1P07900 732 aaKnown RBP13.52□□□□□ -0.25
BCAT1-204ENST00000538118 ATAD2BQ9ULI0 1458 aa13.52□□□□□ -0.25
BCAT1-204ENST00000538118 SUPT16HQ9Y5B9 1047 aaKnown RBP13.52□□□□□ -0.25
BCAT1-204ENST00000538118 FMN1Q68DA7 1419 aa13.52□□□□□ -0.25
BCAT1-204ENST00000538118 SMARCA4P51532 1647 aa13.51□□□□□ -0.25
BCAT1-204ENST00000538118 PDS5BQ9NTI5 1447 aa13.51□□□□□ -0.25
BCAT1-204ENST00000538118 KNSTRNQ9Y448 316 aa13.51□□□□□ -0.25
BCAT1-204ENST00000538118 PLPPR3Q6T4P5 718 aa13.49□□□□□ -0.25
BCAT1-204ENST00000538118 CADPSQ9ULU8 1353 aa13.49□□□□□ -0.25
BCAT1-204ENST00000538118 TDRD9Q8NDG6 1382 aaKnown RBP13.49□□□□□ -0.25
BCAT1-204ENST00000538118 RAB3GAP2Q9H2M9 1393 aa13.49□□□□□ -0.25
BCAT1-204ENST00000538118 RAPGEF2Q9Y4G8 1499 aa13.48□□□□□ -0.25
BCAT1-204ENST00000538118 CCER2I3L3R5 266 aa13.45□□□□□ -0.26
BCAT1-204ENST00000538118 PPP1R15AO75807 674 aaPredicted RBP13.44□□□□□ -0.26
BCAT1-204ENST00000538118 CFAP53Q96M91 514 aa13.44□□□□□ -0.26
BCAT1-204ENST00000538118 SENP3-EIF4A1A0A087X0R7 540 aa13.43□□□□□ -0.26
BCAT1-204ENST00000538118 DCAF11Q8TEB1 546 aa13.43□□□□□ -0.26
BCAT1-204ENST00000538118 NBR1Q14596 966 aa13.43□□□□□ -0.26
BCAT1-204ENST00000538118 RUSC2Q8N2Y8 1516 aa13.42□□□□□ -0.26
BCAT1-204ENST00000538118 CARMIL2Q6F5E8 1435 aa13.42□□□□□ -0.26
BCAT1-204ENST00000538118 GLIPR1L2Q4G1C9 344 aa13.42□□□□□ -0.26
BCAT1-204ENST00000538118 PPP4R2Q9NY27 417 aa13.41□□□□□ -0.26
BCAT1-204ENST00000538118 SENP3Q9H4L4 574 aaPredicted RBP13.41□□□□□ -0.26
BCAT1-204ENST00000538118 ANP32BQ92688 251 aaKnown RBP13.4□□□□□ -0.26
BCAT1-204ENST00000538118 HSPA5P11021 654 aaKnown RBP13.4□□□□□ -0.26
BCAT1-204ENST00000538118 PKD2Q13563 968 aa13.39□□□□□ -0.27
BCAT1-204ENST00000538118 FHOD3Q2V2M9 1422 aa13.39□□□□□ -0.27
BCAT1-204ENST00000538118 MYH16Q9H6N6 1097 aa13.38□□□□□ -0.27
BCAT1-204ENST00000538118 TMF1P82094 1093 aa13.38□□□□□ -0.27
BCAT1-204ENST00000538118 MPHOSPH9Q99550 1183 aa13.38□□□□□ -0.27
BCAT1-204ENST00000538118 ANP32EQ9BTT0 268 aa13.37□□□□□ -0.27
BCAT1-204ENST00000538118 FOXD1Q16676 465 aa13.36□□□□□ -0.27
BCAT1-204ENST00000538118 CC2D1BQ5T0F9 858 aaKnown RBP13.35□□□□□ -0.27
BCAT1-204ENST00000538118 DDRGK1Q96HY6 314 aa13.35□□□□□ -0.27
BCAT1-204ENST00000538118 KANK1Q14678 1352 aa13.34□□□□□ -0.27
BCAT1-204ENST00000538118 ANKRD30AQ9BXX3 1397 aa13.33□□□□□ -0.28
BCAT1-204ENST00000538118 NEUROD2Q15784 382 aa13.33□□□□□ -0.28
BCAT1-204ENST00000538118 NUDCQ9Y266 331 aa13.32□□□□□ -0.28
BCAT1-204ENST00000538118 NUP155O75694 1391 aa13.32□□□□□ -0.28
BCAT1-204ENST00000538118 DHX57Q6P158 1386 aaKnown RBP13.31□□□□□ -0.28
BCAT1-204ENST00000538118 BECN1Q14457 450 aa13.31□□□□□ -0.28
BCAT1-204ENST00000538118 POGKQ9P215 609 aa13.31□□□□□ -0.28
BCAT1-204ENST00000538118 PPM1GO15355 546 aaPredicted RBP13.31□□□□□ -0.28
BCAT1-204ENST00000538118 MAPK8IP3Q9UPT6 1336 aa13.3□□□□□ -0.28
BCAT1-204ENST00000538118 B4GALNT3Q6L9W6 998 aa13.29□□□□□ -0.28
BCAT1-204ENST00000538118 CCDC18Q5T9S5 1454 aa13.29□□□□□ -0.28
BCAT1-204ENST00000538118 FANCD2Q9BXW9 1451 aa13.29□□□□□ -0.28
BCAT1-204ENST00000538118 FTSJ3Q8IY81 847 aaKnown RBP13.29□□□□□ -0.28
BCAT1-204ENST00000538118 L3MBTL2Q969R5 705 aa13.28□□□□□ -0.28
BCAT1-204ENST00000538118 ARID4BQ4LE39 1312 aaPredicted RBP13.28□□□□□ -0.28
BCAT1-204ENST00000538118 EFCAB2Q5VUJ9 269 aa13.28□□□□□ -0.28
BCAT1-204ENST00000538118 TNNT2P45379 298 aaPredicted RBP13.27□□□□□ -0.28
BCAT1-204ENST00000538118 C14orf37Q86TY3 774 aa13.27□□□□□ -0.29
BCAT1-204ENST00000538118 KTN1Q86UP2 1357 aaKnown RBP13.25□□□□□ -0.29
BCAT1-204ENST00000538118 RSPH4AQ5TD94 716 aa13.24□□□□□ -0.29
BCAT1-204ENST00000538118 ROCK2O75116 1388 aaKnown RBP13.24□□□□□ -0.29
BCAT1-204ENST00000538118 IGF1RP08069 1367 aa13.24□□□□□ -0.29
BCAT1-204ENST00000538118 FRAT1Q92837 279 aaPredicted RBP13.24□□□□□ -0.29
BCAT1-204ENST00000538118 ERICH6BQ5W0A0 696 aa13.24□□□□□ -0.29
BCAT1-204ENST00000538118 JPH4Q96JJ6 628 aa13.24□□□□□ -0.29
BCAT1-204ENST00000538118 RALBP1Q15311 655 aa13.22□□□□□ -0.29
BCAT1-204ENST00000538118 U2SURPO15042 1029 aaKnown RBP13.22□□□□□ -0.29
BCAT1-204ENST00000538118 RGS3P49796 1198 aa13.22□□□□□ -0.29
BCAT1-204ENST00000538118 ARXQ96QS3 562 aa13.22□□□□□ -0.29
BCAT1-204ENST00000538118 MS4A1P11836 297 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms