RNA–Protein interactions for RNA: ENST00000538065.5

ATXN7-213, Transcript of ataxin 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN7, Length 6,842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN7-213ENST00000538065 SALL2Q9Y467 1007 aaPredicted RBP21.87■■□□□ 1.09
ATXN7-213ENST00000538065 PDS5BQ9NTI5 1447 aa21.87■■□□□ 1.09
ATXN7-213ENST00000538065 CUX2O14529 1486 aa21.86■■□□□ 1.09
ATXN7-213ENST00000538065 TMC1Q8TDI8 760 aa21.8■■□□□ 1.08
ATXN7-213ENST00000538065 SMARCA2P51531 1590 aa21.79■■□□□ 1.08
ATXN7-213ENST00000538065 EEA1Q15075 1411 aa21.78■■□□□ 1.08
ATXN7-213ENST00000538065 LMOD2Q6P5Q4 547 aa21.77■■□□□ 1.08
ATXN7-213ENST00000538065 DDX10Q13206 875 aaKnown RBP21.76■■□□□ 1.07
ATXN7-213ENST00000538065 FAM9BQ8IZU0 186 aa21.76■■□□□ 1.07
ATXN7-213ENST00000538065 CEP162Q5TB80 1403 aa21.75■■□□□ 1.07
ATXN7-213ENST00000538065 CARMIL1Q5VZK9 1371 aa21.75■■□□□ 1.07
ATXN7-213ENST00000538065 HIRIP3Q9BW71 556 aaPredicted RBP21.73■■□□□ 1.07
ATXN7-213ENST00000538065 TDRD9Q8NDG6 1382 aaKnown RBP21.72■■□□□ 1.07
ATXN7-213ENST00000538065 MROH2BQ7Z745 1585 aa21.72■■□□□ 1.07
ATXN7-213ENST00000538065 SOGA1O94964 1423 aa21.7■■□□□ 1.07
ATXN7-213ENST00000538065 CEP164Q9UPV0 1460 aa21.7■■□□□ 1.06
ATXN7-213ENST00000538065 NPM2Q86SE8 214 aaKnown RBP21.7■■□□□ 1.06
ATXN7-213ENST00000538065 WDR43Q15061 677 aaKnown RBP eCLIP21.69■■□□□ 1.06
ATXN7-213ENST00000538065 CCDC88BA6NC98 1476 aa21.67■■□□□ 1.06
ATXN7-213ENST00000538065 CCNB3Q8WWL7 1395 aa21.67■■□□□ 1.06
ATXN7-213ENST00000538065 MYT1Q01538 1121 aa21.63■■□□□ 1.05
ATXN7-213ENST00000538065 POGKQ9P215 609 aa21.63■■□□□ 1.05
ATXN7-213ENST00000538065 PPM1GO15355 546 aaPredicted RBP21.63■■□□□ 1.05
ATXN7-213ENST00000538065 GGT6Q6P531 493 aa21.61■■□□□ 1.05
ATXN7-213ENST00000538065 ARXQ96QS3 562 aa21.6■■□□□ 1.05
ATXN7-213ENST00000538065 CARMIL2Q6F5E8 1435 aa21.6■■□□□ 1.05
ATXN7-213ENST00000538065 HNRNPUQ00839 825 aaKnown RBP eCLIP21.57■■□□□ 1.04
ATXN7-213ENST00000538065 ABCC8Q09428 1581 aa21.57■■□□□ 1.04
ATXN7-213ENST00000538065 RTL5Q5HYW3 569 aaPredicted RBP21.57■■□□□ 1.04
ATXN7-213ENST00000538065 WIZO95785 1651 aa21.55■■□□□ 1.04
ATXN7-213ENST00000538065 KANK1Q14678 1352 aa21.53■■□□□ 1.04
ATXN7-213ENST00000538065 EIF4G2P78344 907 aaKnown RBP eCLIP21.52■■□□□ 1.04
ATXN7-213ENST00000538065 TNIKQ9UKE5 1360 aa21.51■■□□□ 1.03
ATXN7-213ENST00000538065 CYB5RLQ6IPT4 315 aa21.5■■□□□ 1.03
ATXN7-213ENST00000538065 CADPSQ9ULU8 1353 aa21.5■■□□□ 1.03
ATXN7-213ENST00000538065 MYO15BQ96JP2 1530 aa21.48■■□□□ 1.03
ATXN7-213ENST00000538065 FHAD1B1AJZ9 1412 aa21.47■■□□□ 1.03
ATXN7-213ENST00000538065 CARD11Q9BXL7 1154 aa21.47■■□□□ 1.03
ATXN7-213ENST00000538065 MRS2Q9HD23 443 aa21.47■■□□□ 1.03
ATXN7-213ENST00000538065 HDGFP51858 240 aaKnown RBP21.45■■□□□ 1.02
ATXN7-213ENST00000538065 GTF3C3Q9Y5Q9 886 aa21.44■■□□□ 1.02
ATXN7-213ENST00000538065 SAFB2Q14151 953 aaKnown RBP eCLIP21.43■■□□□ 1.02
ATXN7-213ENST00000538065 SOX12O15370 315 aa21.42■■□□□ 1.02
ATXN7-213ENST00000538065 TNNT2P45379 298 aaPredicted RBP21.4■■□□□ 1.02
ATXN7-213ENST00000538065 SENP3-EIF4A1A0A087X0R7 540 aa21.4■■□□□ 1.02
ATXN7-213ENST00000538065 KNSTRNQ9Y448 316 aa21.38■■□□□ 1.01
ATXN7-213ENST00000538065 TOP2AP11388 1531 aaKnown RBP21.38■■□□□ 1.01
ATXN7-213ENST00000538065 STK26Q9P289 416 aa21.38■■□□□ 1.01
ATXN7-213ENST00000538065 ATAD2BQ9ULI0 1458 aa21.37■■□□□ 1.01
ATXN7-213ENST00000538065 OSCARQ8IYS5 282 aa21.37■■□□□ 1.01
ATXN7-213ENST00000538065 CDCA8Q53HL2 280 aa21.37■■□□□ 1.01
ATXN7-213ENST00000538065 CFAP53Q96M91 514 aa21.36■■□□□ 1.01
ATXN7-213ENST00000538065 NPHP1O15259 732 aa21.36■■□□□ 1.01
ATXN7-213ENST00000538065 EFCAB2Q5VUJ9 269 aa21.35■■□□□ 1.01
ATXN7-213ENST00000538065 ACIN1Q9UKV3 1341 aaKnown RBP21.34■■□□□ 1.01
ATXN7-213ENST00000538065 DCAF11Q8TEB1 546 aa21.34■■□□□ 1.01
ATXN7-213ENST00000538065 JPH4Q96JJ6 628 aa21.34■■□□□ 1.01
ATXN7-213ENST00000538065 FANCD2Q9BXW9 1451 aa21.33■■□□□ 1.01
ATXN7-213ENST00000538065 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.32■■□□□ 1
ATXN7-213ENST00000538065 LAS1LQ9Y4W2 734 aaKnown RBP21.32■■□□□ 1
ATXN7-213ENST00000538065 SRPK2P78362 688 aaKnown RBP21.31■■□□□ 1
ATXN7-213ENST00000538065 AEBP2Q6ZN18 517 aaPredicted RBP21.31■■□□□ 1
ATXN7-213ENST00000538065 SIN3AQ96ST3 1273 aa21.31■■□□□ 1
ATXN7-213ENST00000538065 SMARCA4P51532 1647 aa21.3■■□□□ 1
ATXN7-213ENST00000538065 HSP90AA1P07900 732 aaKnown RBP21.29■■□□□ 1
ATXN7-213ENST00000538065 FKBP8Q14318 412 aa21.27■■□□□ 1
ATXN7-213ENST00000538065 NEUROD2Q15784 382 aa21.27■■□□□ 1
ATXN7-213ENST00000538065 HNRNPMP52272 730 aaKnown RBP eCLIP21.27■■□□□ 12e-6■□□□□ 9.3
ATXN7-213ENST00000538065 MYH16Q9H6N6 1097 aa21.27■■□□□ 1
ATXN7-213ENST00000538065 PAK3O75914 559 aaPredicted RBP21.26■□□□□ 0.99
ATXN7-213ENST00000538065 KIF3BO15066 747 aa21.25■□□□□ 0.99
ATXN7-213ENST00000538065 ARHGAP35Q9NRY4 1499 aa21.24■□□□□ 0.99
ATXN7-213ENST00000538065 CC2D1BQ5T0F9 858 aaKnown RBP21.22■□□□□ 0.99
ATXN7-213ENST00000538065 NUTM2DQ5VT03 806 aaPredicted RBP21.22■□□□□ 0.99
ATXN7-213ENST00000538065 FOXD1Q16676 465 aa21.22■□□□□ 0.99
ATXN7-213ENST00000538065 MAPK8IP3Q9UPT6 1336 aa21.2■□□□□ 0.98
ATXN7-213ENST00000538065 U2SURPO15042 1029 aaKnown RBP21.2■□□□□ 0.98
ATXN7-213ENST00000538065 UPF2Q9HAU5 1272 aaKnown RBP21.19■□□□□ 0.98
ATXN7-213ENST00000538065 PKD2Q13563 968 aa21.18■□□□□ 0.98
ATXN7-213ENST00000538065 FHOD3Q2V2M9 1422 aa21.17■□□□□ 0.98
ATXN7-213ENST00000538065 FMN1Q68DA7 1419 aa21.17■□□□□ 0.98
ATXN7-213ENST00000538065 CCDC9Q9Y3X0 531 aaKnown RBP21.17■□□□□ 0.98
ATXN7-213ENST00000538065 ANP32AP39687 249 aaKnown RBP21.17■□□□□ 0.98
ATXN7-213ENST00000538065 NUDCQ9Y266 331 aa21.17■□□□□ 0.98
ATXN7-213ENST00000538065 SPAG9O60271 1321 aaKnown RBP21.16■□□□□ 0.98
ATXN7-213ENST00000538065 WASHC2CQ9Y4E1 1318 aa21.16■□□□□ 0.98
ATXN7-213ENST00000538065 RAPGEF2Q9Y4G8 1499 aa21.15■□□□□ 0.98
ATXN7-213ENST00000538065 EID1Q9Y6B2 187 aa21.15■□□□□ 0.98
ATXN7-213ENST00000538065 KANK4Q5T7N3 995 aaPredicted RBP21.15■□□□□ 0.98
ATXN7-213ENST00000538065 IRX6P78412 446 aaPredicted RBP21.13■□□□□ 0.97
ATXN7-213ENST00000538065 CCDC136Q96JN2 1154 aa21.13■□□□□ 0.97
ATXN7-213ENST00000538065 TMF1P82094 1093 aa21.12■□□□□ 0.97
ATXN7-213ENST00000538065 CSB-PGBD3P0DP91 1061 aa21.11■□□□□ 0.97
ATXN7-213ENST00000538065 FAM69CQ0P6D2 419 aa21.1■□□□□ 0.97
ATXN7-213ENST00000538065 PTPRGP23470 1445 aa21.1■□□□□ 0.97
ATXN7-213ENST00000538065 NUP155O75694 1391 aa21.09■□□□□ 0.97
ATXN7-213ENST00000538065 ANKRD30AQ9BXX3 1397 aa21.06■□□□□ 0.96
ATXN7-213ENST00000538065 NUTM2FA1L443 756 aa21.04■□□□□ 0.96
ATXN7-213ENST00000538065 MIER1Q8N108 512 aa21.03■□□□□ 0.96
ATXN7-213ENST00000538065 HDGFL2Q7Z4V5 671 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms