RNA–Protein interactions for RNA: ENST00000537064.5

POLE-210, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 1 (best)

Gene POLE, Length 8,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-210	ENST00000537064	DEK	P35659	375 aa	Known RBP	14.26	□□□□□ -0.13
POLE-210	ENST00000537064	BECN1	Q14457	450 aa		14.24	□□□□□ -0.13
POLE-210	ENST00000537064	BAZ1B	Q9UIG0	1483 aa	Known RBP	14.24	□□□□□ -0.13
POLE-210	ENST00000537064	ZNF326	Q5BKZ1	582 aa	Known RBP	14.23	□□□□□ -0.13
POLE-210	ENST00000537064	KIF27	Q86VH2	1401 aa		14.22	□□□□□ -0.13
POLE-210	ENST00000537064	FHAD1	B1AJZ9	1412 aa		14.21	□□□□□ -0.13
POLE-210	ENST00000537064	NEFM	P07197	916 aa		14.21	□□□□□ -0.14
POLE-210	ENST00000537064	FANCI	Q9NVI1	1328 aa		14.2	□□□□□ -0.14
POLE-210	ENST00000537064	MTUS2	Q5JR59	1369 aa		14.19	□□□□□ -0.14
POLE-210	ENST00000537064	SETD5	Q9C0A6	1442 aa		14.18	□□□□□ -0.14
POLE-210	ENST00000537064	IRX6	P78412	446 aa	Predicted RBP	14.18	□□□□□ -0.14
POLE-210	ENST00000537064	TOP2A	P11388	1531 aa	Known RBP	14.17	□□□□□ -0.14
POLE-210	ENST00000537064	PABPN1	Q86U42	306 aa	Known RBP eCLIP	14.15	□□□□□ -0.14	1e-6	■■■■■ 29.8
POLE-210	ENST00000537064	SOGA1	O94964	1423 aa		14.14	□□□□□ -0.15
POLE-210	ENST00000537064	USP35	Q9P2H5	1018 aa		14.14	□□□□□ -0.15
POLE-210	ENST00000537064	TNNT2	P45379	298 aa	Predicted RBP	14.13	□□□□□ -0.15
POLE-210	ENST00000537064	MROH2B	Q7Z745	1585 aa		14.13	□□□□□ -0.15
POLE-210	ENST00000537064	HSP90AA1	P07900	732 aa	Known RBP	14.12	□□□□□ -0.15
POLE-210	ENST00000537064	WIZ	O95785	1651 aa		14.11	□□□□□ -0.15
POLE-210	ENST00000537064	ABCC8	Q09428	1581 aa		14.11	□□□□□ -0.15
POLE-210	ENST00000537064	CCDC88B	A6NC98	1476 aa		14.1	□□□□□ -0.15
POLE-210	ENST00000537064	P3H3	Q8IVL6	736 aa		14.1	□□□□□ -0.15
POLE-210	ENST00000537064	CECR2	Q9BXF3	1484 aa		14.09	□□□□□ -0.15
POLE-210	ENST00000537064	TRIM44	Q96DX7	344 aa	Predicted RBP	14.08	□□□□□ -0.16
POLE-210	ENST00000537064	L1TD1	Q5T7N2	865 aa	Known RBP	14.07	□□□□□ -0.16
POLE-210	ENST00000537064	WDR43	Q15061	677 aa	Known RBP eCLIP	14.06	□□□□□ -0.16
POLE-210	ENST00000537064	IPO9	Q96P70	1041 aa	Known RBP	14.06	□□□□□ -0.16
POLE-210	ENST00000537064	DHX57	Q6P158	1386 aa	Known RBP	14.05	□□□□□ -0.16
POLE-210	ENST00000537064	TCERG1	O14776	1098 aa	Known RBP	14.05	□□□□□ -0.16
POLE-210	ENST00000537064	ARHGAP35	Q9NRY4	1499 aa		14.04	□□□□□ -0.16
POLE-210	ENST00000537064	RAB3GAP2	Q9H2M9	1393 aa		14.03	□□□□□ -0.16
POLE-210	ENST00000537064	B4GALNT3	Q6L9W6	998 aa		14.03	□□□□□ -0.16
POLE-210	ENST00000537064	HIRIP3	Q9BW71	556 aa	Predicted RBP	14.03	□□□□□ -0.16
POLE-210	ENST00000537064	GOLGA6L22	H0YM25	854 aa		14.01	□□□□□ -0.17
POLE-210	ENST00000537064	KIF21B	O75037	1637 aa		13.99	□□□□□ -0.17
POLE-210	ENST00000537064	PLPPR3	Q6T4P5	718 aa		13.98	□□□□□ -0.17
POLE-210	ENST00000537064	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.98	□□□□□ -0.17
POLE-210	ENST00000537064	SIN3A	Q96ST3	1273 aa		13.97	□□□□□ -0.17
POLE-210	ENST00000537064	LAS1L	Q9Y4W2	734 aa	Known RBP	13.96	□□□□□ -0.17
POLE-210	ENST00000537064	ARX	Q96QS3	562 aa		13.96	□□□□□ -0.17
POLE-210	ENST00000537064	SMARCA2	P51531	1590 aa		13.95	□□□□□ -0.18
POLE-210	ENST00000537064	PPP1R15A	O75807	674 aa	Predicted RBP	13.95	□□□□□ -0.18
POLE-210	ENST00000537064	RSPH6A	Q9H0K4	717 aa		13.94	□□□□□ -0.18
POLE-210	ENST00000537064	CDK11B	P21127	795 aa	Known RBP	13.94	□□□□□ -0.18
POLE-210	ENST00000537064	CDCA8	Q53HL2	280 aa		13.93	□□□□□ -0.18
POLE-210	ENST00000537064	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.93	□□□□□ -0.18
POLE-210	ENST00000537064	PTMS	P20962	102 aa		13.93	□□□□□ -0.18
POLE-210	ENST00000537064	SMARCA4	P51532	1647 aa		13.92	□□□□□ -0.18
POLE-210	ENST00000537064	CHIC2	Q9UKJ5	165 aa		13.92	□□□□□ -0.18
POLE-210	ENST00000537064	ZBED9	Q6R2W3	1325 aa		13.91	□□□□□ -0.18
POLE-210	ENST00000537064	NCL	P19338	710 aa	Known RBP	13.91	□□□□□ -0.18
POLE-210	ENST00000537064	RTN4	Q9NQC3	1192 aa	Known RBP	13.91	□□□□□ -0.18
POLE-210	ENST00000537064	NUDC	Q9Y266	331 aa		13.91	□□□□□ -0.18
POLE-210	ENST00000537064	ROCK2	O75116	1388 aa	Known RBP	13.9	□□□□□ -0.18
POLE-210	ENST00000537064	SALL2	Q9Y467	1007 aa	Predicted RBP	13.9	□□□□□ -0.18
POLE-210	ENST00000537064	FMN1	Q68DA7	1419 aa		13.88	□□□□□ -0.19
POLE-210	ENST00000537064	RRP7BP	Q9NSQ0	103 aa		13.88	□□□□□ -0.19
POLE-210	ENST00000537064	PDE3B	Q13370	1112 aa		13.88	□□□□□ -0.19
POLE-210	ENST00000537064	MS4A1	P11836	297 aa		13.86	□□□□□ -0.19
POLE-210	ENST00000537064	RALBP1	Q15311	655 aa		13.86	□□□□□ -0.19
POLE-210	ENST00000537064	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.86	□□□□□ -0.19
POLE-210	ENST00000537064	TSPY4	P0CV99	314 aa		13.86	□□□□□ -0.19
POLE-210	ENST00000537064	TSPY10	P0CW01	314 aa		13.86	□□□□□ -0.19
POLE-210	ENST00000537064	PHLDB1	Q86UU1	1377 aa		13.85	□□□□□ -0.19
POLE-210	ENST00000537064	HSPA5	P11021	654 aa	Known RBP	13.85	□□□□□ -0.19
POLE-210	ENST00000537064	RAPGEF2	Q9Y4G8	1499 aa		13.85	□□□□□ -0.19
POLE-210	ENST00000537064	MYH16	Q9H6N6	1097 aa		13.84	□□□□□ -0.19
POLE-210	ENST00000537064	KANK4	Q5T7N3	995 aa	Predicted RBP	13.84	□□□□□ -0.19
POLE-210	ENST00000537064	CHMP4B	Q9H444	224 aa	Known RBP	13.83	□□□□□ -0.2
POLE-210	ENST00000537064	TULP1	O00294	542 aa	Predicted RBP	13.83	□□□□□ -0.2
POLE-210	ENST00000537064	CARD11	Q9BXL7	1154 aa		13.83	□□□□□ -0.2
POLE-210	ENST00000537064	RCAN3	Q9UKA8	241 aa		13.82	□□□□□ -0.2
POLE-210	ENST00000537064	ERICH3	Q5RHP9	1530 aa		13.82	□□□□□ -0.2
POLE-210	ENST00000537064	CARMIL1	Q5VZK9	1371 aa		13.82	□□□□□ -0.2
POLE-210	ENST00000537064	CFAP44	Q96MT7	982 aa		13.81	□□□□□ -0.2
POLE-210	ENST00000537064		A0A0G2JS52	829 aa		13.81	□□□□□ -0.2
POLE-210	ENST00000537064	KNSTRN	Q9Y448	316 aa		13.81	□□□□□ -0.2
POLE-210	ENST00000537064	PNN	Q9H307	717 aa	Known RBP	13.8	□□□□□ -0.2
POLE-210	ENST00000537064	GSE1	Q14687	1217 aa		13.8	□□□□□ -0.2
POLE-210	ENST00000537064	KTN1	Q86UP2	1357 aa	Known RBP	13.79	□□□□□ -0.2
POLE-210	ENST00000537064	RRBP1	Q9P2E9	1410 aa	Known RBP	13.78	□□□□□ -0.2
POLE-210	ENST00000537064	CUX2	O14529	1486 aa		13.77	□□□□□ -0.2
POLE-210	ENST00000537064	KDM2A	Q9Y2K7	1162 aa		13.76	□□□□□ -0.21
POLE-210	ENST00000537064	MSN	P26038	577 aa	Known RBP	13.76	□□□□□ -0.21
POLE-210	ENST00000537064	HSCB	Q8IWL3	235 aa		13.76	□□□□□ -0.21
POLE-210	ENST00000537064	CASC1	Q6TDU7	716 aa		13.75	□□□□□ -0.21
POLE-210	ENST00000537064	PLEKHG5	O94827	1062 aa		13.74	□□□□□ -0.21
POLE-210	ENST00000537064	CFAP53	Q96M91	514 aa		13.74	□□□□□ -0.21
POLE-210	ENST00000537064	CCDC18	Q5T9S5	1454 aa		13.73	□□□□□ -0.21
POLE-210	ENST00000537064	RGS3	P49796	1198 aa		13.73	□□□□□ -0.21
POLE-210	ENST00000537064	NCBP3	Q53F19	620 aa	Known RBP	13.73	□□□□□ -0.21
POLE-210	ENST00000537064	CUX1	P39880	1505 aa		13.73	□□□□□ -0.21
POLE-210	ENST00000537064	KIF15	Q9NS87	1388 aa		13.73	□□□□□ -0.21
POLE-210	ENST00000537064	GBP4	Q96PP9	640 aa		13.72	□□□□□ -0.21
POLE-210	ENST00000537064	FTSJ3	Q8IY81	847 aa	Known RBP	13.72	□□□□□ -0.21
POLE-210	ENST00000537064	GOLGA6L3	A6NEY3	463 aa		13.72	□□□□□ -0.21
POLE-210	ENST00000537064	KCNH8	Q96L42	1107 aa		13.72	□□□□□ -0.21
POLE-210	ENST00000537064	PTMA	P06454	111 aa	Known RBP	13.72	□□□□□ -0.21
POLE-210	ENST00000537064	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.71	□□□□□ -0.22
POLE-210	ENST00000537064	ARID3C	A6NKF2	412 aa		13.7	□□□□□ -0.22

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