RNA–Protein interactions for RNA: ENST00000536997.1

MDM1-207, Transcript of Mdm1 nuclear protein, humanhuman

TSL 4

Gene MDM1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-207ENST00000536997 SLC39A7Q92504 469 aa15.28■□□□□ 0.04
MDM1-207ENST00000536997 FAM163AQ96GL9 167 aaPredicted RBP15.24■□□□□ 0.03
MDM1-207ENST00000536997 ATMINO43313 823 aaPredicted RBP15.22■□□□□ 0.03
MDM1-207ENST00000536997 MS4A3Q96HJ5 214 aa15.19■□□□□ 0.02
MDM1-207ENST00000536997 NPM1P06748 294 aaKnown RBP eCLIP15.18■□□□□ 0.02
MDM1-207ENST00000536997 SCUBE2Q9NQ36 999 aa15.17■□□□□ 0.02
MDM1-207ENST00000536997 MNX1P50219 401 aaPredicted RBP15.11■□□□□ 0.01
MDM1-207ENST00000536997 ATN1P54259 1190 aaPredicted RBP15.02■□□□□ -0
MDM1-207ENST00000536997 CDAN1Q8IWY9 1227 aa15□□□□□ -0.01
MDM1-207ENST00000536997 POTEFA5A3E0 1075 aa14.96□□□□□ -0.01
MDM1-207ENST00000536997 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
MDM1-207ENST00000536997 BMP2KQ9NSY1 1161 aaPredicted RBP14.88□□□□□ -0.03
MDM1-207ENST00000536997 TSPYL2Q9H2G4 693 aaPredicted RBP14.87□□□□□ -0.03
MDM1-207ENST00000536997 CCDC61Q9Y6R9 512 aa14.86□□□□□ -0.03
MDM1-207ENST00000536997 KIF12Q96FN5 646 aa14.83□□□□□ -0.04
MDM1-207ENST00000536997 TRPC6Q9Y210 931 aa14.8□□□□□ -0.04
MDM1-207ENST00000536997 TIE1P35590 1138 aa14.78□□□□□ -0.04
MDM1-207ENST00000536997 COLQQ9Y215 455 aaPredicted RBP14.77□□□□□ -0.05
MDM1-207ENST00000536997 SEC24BO95487 1268 aa14.75□□□□□ -0.05
MDM1-207ENST00000536997 ST18O60284 1047 aa14.72□□□□□ -0.05
MDM1-207ENST00000536997 MMRN1Q13201 1228 aa14.71□□□□□ -0.05
MDM1-207ENST00000536997 MAP3K13O43283 966 aa14.68□□□□□ -0.06
MDM1-207ENST00000536997 TTLL13PA6NNM8 815 aa14.67□□□□□ -0.06
MDM1-207ENST00000536997 SPNS2Q8IVW8 549 aa14.65□□□□□ -0.06
MDM1-207ENST00000536997 SLAIN1Q8ND83 568 aa14.65□□□□□ -0.06
MDM1-207ENST00000536997 IER5LQ5T953 404 aa14.62□□□□□ -0.07
MDM1-207ENST00000536997 TRIM35Q9UPQ4 493 aa14.58□□□□□ -0.08
MDM1-207ENST00000536997 TMEM121BQ9BXQ6 578 aaPredicted RBP14.51□□□□□ -0.09
MDM1-207ENST00000536997 RASEFQ8IZ41 740 aa14.5□□□□□ -0.09
MDM1-207ENST00000536997 CSRNP3Q8WYN3 585 aa14.5□□□□□ -0.09
MDM1-207ENST00000536997 SGIP1Q9BQI5 828 aa14.45□□□□□ -0.1
MDM1-207ENST00000536997 PLCG2P16885 1265 aa14.42□□□□□ -0.1
MDM1-207ENST00000536997 PROM2Q8N271 834 aa14.42□□□□□ -0.1
MDM1-207ENST00000536997 PCDHB13Q9Y5F0 798 aa14.42□□□□□ -0.1
MDM1-207ENST00000536997 PLEKHG5O94827 1062 aa14.39□□□□□ -0.11
MDM1-207ENST00000536997 SNPHO15079 494 aa14.38□□□□□ -0.11
MDM1-207ENST00000536997 MARVELD3Q96A59 401 aa14.38□□□□□ -0.11
MDM1-207ENST00000536997 IRX5P78411 483 aaPredicted RBP14.34□□□□□ -0.11
MDM1-207ENST00000536997 TMEM106CQ9BVX2 250 aa14.33□□□□□ -0.12
MDM1-207ENST00000536997 MIER1Q8N108 512 aa14.32□□□□□ -0.12
MDM1-207ENST00000536997 IFNL1Q8IU54 200 aa14.31□□□□□ -0.12
MDM1-207ENST00000536997 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.26□□□□□ -0.13
MDM1-207ENST00000536997 OCEL1Q9H607 264 aa14.24□□□□□ -0.13
MDM1-207ENST00000536997 EMP3P54852 163 aa14.21□□□□□ -0.13
MDM1-207ENST00000536997 KRTAP3-3Q9BYR6 98 aa14.21□□□□□ -0.13
MDM1-207ENST00000536997 KRTAP3-2Q9BYR7 98 aa14.21□□□□□ -0.13
MDM1-207ENST00000536997 NUBP1P53384 320 aa14.14□□□□□ -0.15
MDM1-207ENST00000536997 HS3ST6Q96QI5 342 aa14.14□□□□□ -0.15
MDM1-207ENST00000536997 POTEB3A0JP26 581 aa14.13□□□□□ -0.15
MDM1-207ENST00000536997 POTEBQ6S5H4 581 aa14.13□□□□□ -0.15
MDM1-207ENST00000536997 PLCD3Q8N3E9 789 aa14.1□□□□□ -0.15
MDM1-207ENST00000536997 FAM205CA6NFA0 338 aa14.09□□□□□ -0.15
MDM1-207ENST00000536997 FAM212AQ96EL1 285 aa14.07□□□□□ -0.16
MDM1-207ENST00000536997 ZBTB47Q9UFB7 747 aaPredicted RBP14.07□□□□□ -0.16
MDM1-207ENST00000536997 C3orf67Q6ZVT6 689 aa14.04□□□□□ -0.16
MDM1-207ENST00000536997 PDCD7Q8N8D1 485 aaKnown RBP13.98□□□□□ -0.17
MDM1-207ENST00000536997 L3MBTL3Q96JM7 780 aaPredicted RBP13.94□□□□□ -0.18
MDM1-207ENST00000536997 RNF166Q96A37 237 aaPredicted RBP13.9□□□□□ -0.18
MDM1-207ENST00000536997 PCDHB8Q9UN66 801 aa13.9□□□□□ -0.18
MDM1-207ENST00000536997 PYGBP11216 843 aa13.89□□□□□ -0.19
MDM1-207ENST00000536997 MKRN3Q13064 507 aaKnown RBP13.83□□□□□ -0.2
MDM1-207ENST00000536997 EHMT2Q96KQ7 1210 aa13.82□□□□□ -0.2
MDM1-207ENST00000536997 DCAF8Q5TAQ9 597 aa13.81□□□□□ -0.2
MDM1-207ENST00000536997 GOLGA2Q08379 1002 aa13.8□□□□□ -0.2
MDM1-207ENST00000536997 HOXB3P14651 431 aaPredicted RBP13.78□□□□□ -0.2
MDM1-207ENST00000536997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.77□□□□□ -0.21
MDM1-207ENST00000536997 HOXB1P14653 301 aaPredicted RBP13.75□□□□□ -0.21
MDM1-207ENST00000536997 MYT1LQ9UL68 1186 aa13.75□□□□□ -0.21
MDM1-207ENST00000536997 ERBB3P21860 1342 aa13.74□□□□□ -0.21
MDM1-207ENST00000536997 ZNF710Q8N1W2 664 aa13.71□□□□□ -0.21
MDM1-207ENST00000536997 ZNF467Q7Z7K2 595 aaPredicted RBP13.69□□□□□ -0.22
MDM1-207ENST00000536997 ILDR1Q86SU0 546 aaPredicted RBP13.67□□□□□ -0.22
MDM1-207ENST00000536997 DOK7Q18PE1 504 aa13.64□□□□□ -0.23
MDM1-207ENST00000536997 VARS2Q5ST30 1063 aaKnown RBP13.63□□□□□ -0.23
MDM1-207ENST00000536997 DPY19L2Q6NUT2 758 aa13.63□□□□□ -0.23
MDM1-207ENST00000536997 BOLA1Q9Y3E2 137 aa13.61□□□□□ -0.23
MDM1-207ENST00000536997 G3V3G9 751 aa13.6□□□□□ -0.23
MDM1-207ENST00000536997 PSEN1P49768 467 aa13.59□□□□□ -0.23
MDM1-207ENST00000536997 PTGER2P43116 358 aa13.58□□□□□ -0.24
MDM1-207ENST00000536997 RIMBP2O15034 1052 aa13.55□□□□□ -0.24
MDM1-207ENST00000536997 ZNF687Q8N1G0 1237 aa13.55□□□□□ -0.24
MDM1-207ENST00000536997 GSE1Q14687 1217 aa13.5□□□□□ -0.25
MDM1-207ENST00000536997 CHRM1P11229 460 aaPredicted RBP13.49□□□□□ -0.25
MDM1-207ENST00000536997 ZSWIM6Q9HCJ5 1215 aa13.45□□□□□ -0.26
MDM1-207ENST00000536997 PDAP1Q13442 181 aaKnown RBP13.44□□□□□ -0.26
MDM1-207ENST00000536997 CABP2Q9NPB3 220 aa13.43□□□□□ -0.26
MDM1-207ENST00000536997 ANKRD13DQ6ZTN6 518 aa13.4□□□□□ -0.26
MDM1-207ENST00000536997 GPR153Q6NV75 609 aa13.38□□□□□ -0.27
MDM1-207ENST00000536997 PLA2G2EQ9NZK7 142 aa13.35□□□□□ -0.27
MDM1-207ENST00000536997 LSM11P83369 360 aaKnown RBP eCLIP13.3□□□□□ -0.28
MDM1-207ENST00000536997 TMEM92Q6UXU6 159 aa13.3□□□□□ -0.28
MDM1-207ENST00000536997 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
MDM1-207ENST00000536997 FBXO3Q9UK99 471 aa13.25□□□□□ -0.29
MDM1-207ENST00000536997 MICALL2Q8IY33 904 aa13.23□□□□□ -0.29
MDM1-207ENST00000536997 ZNF316A6NFI3 1004 aaPredicted RBP13.22□□□□□ -0.29
MDM1-207ENST00000536997 FKBP8Q14318 412 aa13.22□□□□□ -0.29
MDM1-207ENST00000536997 ARSIQ5FYB1 569 aa13.22□□□□□ -0.29
MDM1-207ENST00000536997 HCSTQ9UBK5 93 aa13.21□□□□□ -0.29
MDM1-207ENST00000536997 EFCAB3Q8N7B9 438 aa13.17□□□□□ -0.3
MDM1-207ENST00000536997 KHSRPQ92945 711 aaKnown RBP eCLIP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms