RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 MNX1P50219 401 aaPredicted RBP14.96□□□□□ -0.01
YBX3-206ENST00000536823 ASTLQ6HA08 431 aaPredicted RBP14.95□□□□□ -0.02
YBX3-206ENST00000536823 MS4A3Q96HJ5 214 aa14.94□□□□□ -0.02
YBX3-206ENST00000536823 SLC39A7Q92504 469 aa14.92□□□□□ -0.02
YBX3-206ENST00000536823 ATMINO43313 823 aaPredicted RBP14.9□□□□□ -0.02
YBX3-206ENST00000536823 C7P10643 843 aa14.9□□□□□ -0.02
YBX3-206ENST00000536823 PCDH10Q9P2E7 1040 aa14.88□□□□□ -0.03
YBX3-206ENST00000536823 POTEJP0CG39 1038 aa14.86□□□□□ -0.03
YBX3-206ENST00000536823 MAMSTRQ6ZN01 415 aa14.86□□□□□ -0.03
YBX3-206ENST00000536823 TSPYL2Q9H2G4 693 aaPredicted RBP14.77□□□□□ -0.05
YBX3-206ENST00000536823 SCUBE2Q9NQ36 999 aa14.76□□□□□ -0.05
YBX3-206ENST00000536823 ATN1P54259 1190 aaPredicted RBP14.74□□□□□ -0.05
YBX3-206ENST00000536823 FAM163AQ96GL9 167 aaPredicted RBP14.74□□□□□ -0.05
YBX3-206ENST00000536823 LCE2DQ5TA82 110 aaPredicted RBP14.73□□□□□ -0.05
YBX3-206ENST00000536823 CCDC61Q9Y6R9 512 aa14.7□□□□□ -0.06
YBX3-206ENST00000536823 KIF12Q96FN5 646 aa14.65□□□□□ -0.06
YBX3-206ENST00000536823 BMP2KQ9NSY1 1161 aaPredicted RBP14.63□□□□□ -0.07
YBX3-206ENST00000536823 RB1CC1Q8TDY2 1594 aa14.63□□□□□ -0.07
YBX3-206ENST00000536823 POTEFA5A3E0 1075 aa14.62□□□□□ -0.07
YBX3-206ENST00000536823 TRPC6Q9Y210 931 aa14.6□□□□□ -0.07
YBX3-206ENST00000536823 NACADO15069 1562 aa14.58□□□□□ -0.08
YBX3-206ENST00000536823 TIE1P35590 1138 aa14.56□□□□□ -0.08
YBX3-206ENST00000536823 MAP3K13O43283 966 aa14.54□□□□□ -0.08
YBX3-206ENST00000536823 EHMT2Q96KQ7 1210 aa14.54□□□□□ -0.08
YBX3-206ENST00000536823 PROM2Q8N271 834 aa14.53□□□□□ -0.08
YBX3-206ENST00000536823 SEC24BO95487 1268 aa14.5□□□□□ -0.09
YBX3-206ENST00000536823 PLEKHG5O94827 1062 aa14.48□□□□□ -0.09
YBX3-206ENST00000536823 COLQQ9Y215 455 aaPredicted RBP14.48□□□□□ -0.09
YBX3-206ENST00000536823 MYO15BQ96JP2 1530 aa14.47□□□□□ -0.09
YBX3-206ENST00000536823 TTLL13PA6NNM8 815 aa14.46□□□□□ -0.09
YBX3-206ENST00000536823 RASEFQ8IZ41 740 aa14.45□□□□□ -0.1
YBX3-206ENST00000536823 DCAF8L2P0C7V8 631 aa14.44□□□□□ -0.1
YBX3-206ENST00000536823 CDAN1Q8IWY9 1227 aa14.44□□□□□ -0.1
YBX3-206ENST00000536823 ZCCHC6Q5VYS8 1495 aaKnown RBP14.43□□□□□ -0.1
YBX3-206ENST00000536823 MIER1Q8N108 512 aa14.41□□□□□ -0.1
YBX3-206ENST00000536823 TRIM35Q9UPQ4 493 aa14.39□□□□□ -0.11
YBX3-206ENST00000536823 IER5LQ5T953 404 aa14.37□□□□□ -0.11
YBX3-206ENST00000536823 DCAF1Q9Y4B6 1507 aa14.36□□□□□ -0.11
YBX3-206ENST00000536823 PCDHB13Q9Y5F0 798 aa14.33□□□□□ -0.12
YBX3-206ENST00000536823 SLAIN1Q8ND83 568 aa14.32□□□□□ -0.12
YBX3-206ENST00000536823 SGIP1Q9BQI5 828 aa14.32□□□□□ -0.12
YBX3-206ENST00000536823 ST18O60284 1047 aa14.29□□□□□ -0.12
YBX3-206ENST00000536823 UNC13AQ9UPW8 1703 aa14.29□□□□□ -0.12
YBX3-206ENST00000536823 PLCD3Q8N3E9 789 aa14.24□□□□□ -0.13
YBX3-206ENST00000536823 PLCG2P16885 1265 aa14.22□□□□□ -0.13
YBX3-206ENST00000536823 IFNL1Q8IU54 200 aa14.22□□□□□ -0.13
YBX3-206ENST00000536823 TMEM106CQ9BVX2 250 aa14.2□□□□□ -0.14
YBX3-206ENST00000536823 BICRAQ9NZM4 1560 aa14.19□□□□□ -0.14
YBX3-206ENST00000536823 ZBTB47Q9UFB7 747 aaPredicted RBP14.17□□□□□ -0.14
YBX3-206ENST00000536823 NUBP1P53384 320 aa14.16□□□□□ -0.14
YBX3-206ENST00000536823 IRX5P78411 483 aaPredicted RBP14.13□□□□□ -0.15
YBX3-206ENST00000536823 MMRN1Q13201 1228 aa14.12□□□□□ -0.15
YBX3-206ENST00000536823 FAM212AQ96EL1 285 aa14.12□□□□□ -0.15
YBX3-206ENST00000536823 SCRIBQ14160 1630 aa14.11□□□□□ -0.15
YBX3-206ENST00000536823 TMEM121BQ9BXQ6 578 aaPredicted RBP14.1□□□□□ -0.15
YBX3-206ENST00000536823 SPNS2Q8IVW8 549 aa14.09□□□□□ -0.15
YBX3-206ENST00000536823 SHROOM4Q9ULL8 1493 aa14.07□□□□□ -0.16
YBX3-206ENST00000536823 SNPHO15079 494 aa14.05□□□□□ -0.16
YBX3-206ENST00000536823 OCEL1Q9H607 264 aa14.05□□□□□ -0.16
YBX3-206ENST00000536823 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.03□□□□□ -0.16
YBX3-206ENST00000536823 MARVELD3Q96A59 401 aa14□□□□□ -0.17
YBX3-206ENST00000536823 PYGBP11216 843 aa13.93□□□□□ -0.18
YBX3-206ENST00000536823 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
YBX3-206ENST00000536823 PCDHB8Q9UN66 801 aa13.89□□□□□ -0.19
YBX3-206ENST00000536823 EMP3P54852 163 aa13.87□□□□□ -0.19
YBX3-206ENST00000536823 C3orf67Q6ZVT6 689 aa13.87□□□□□ -0.19
YBX3-206ENST00000536823 PDCD7Q8N8D1 485 aaKnown RBP13.83□□□□□ -0.2
YBX3-206ENST00000536823 EIF4G1Q04637 1599 aaKnown RBP13.83□□□□□ -0.2
YBX3-206ENST00000536823 CC2D2AQ9P2K1 1620 aa13.79□□□□□ -0.2
YBX3-206ENST00000536823 L3MBTL3Q96JM7 780 aaPredicted RBP13.79□□□□□ -0.2
YBX3-206ENST00000536823 GOLGA2Q08379 1002 aa13.78□□□□□ -0.2
YBX3-206ENST00000536823 HS3ST6Q96QI5 342 aa13.78□□□□□ -0.2
YBX3-206ENST00000536823 KRTAP3-3Q9BYR6 98 aa13.78□□□□□ -0.2
YBX3-206ENST00000536823 KRTAP3-2Q9BYR7 98 aa13.78□□□□□ -0.2
YBX3-206ENST00000536823 MKRN3Q13064 507 aaKnown RBP13.77□□□□□ -0.21
YBX3-206ENST00000536823 FAM205CA6NFA0 338 aa13.76□□□□□ -0.21
YBX3-206ENST00000536823 POTEB3A0JP26 581 aa13.74□□□□□ -0.21
YBX3-206ENST00000536823 POTEBQ6S5H4 581 aa13.74□□□□□ -0.21
YBX3-206ENST00000536823 ZNF467Q7Z7K2 595 aaPredicted RBP13.72□□□□□ -0.21
YBX3-206ENST00000536823 CECR2Q9BXF3 1484 aa13.72□□□□□ -0.21
YBX3-206ENST00000536823 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.7□□□□□ -0.228e-7■□□□□ 11
YBX3-206ENST00000536823 FKBP8Q14318 412 aa13.69□□□□□ -0.22
YBX3-206ENST00000536823 GSE1Q14687 1217 aa13.64□□□□□ -0.23
YBX3-206ENST00000536823 PSEN1P49768 467 aa13.61□□□□□ -0.23
YBX3-206ENST00000536823 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
YBX3-206ENST00000536823 KLHL34Q8N239 644 aa13.56□□□□□ -0.24
YBX3-206ENST00000536823 G3V3G9 751 aa13.55□□□□□ -0.24
YBX3-206ENST00000536823 CHRM1P11229 460 aaPredicted RBP13.55□□□□□ -0.24
YBX3-206ENST00000536823 ILDR1Q86SU0 546 aaPredicted RBP13.55□□□□□ -0.24
YBX3-206ENST00000536823 DPY19L2Q6NUT2 758 aa13.54□□□□□ -0.24
YBX3-206ENST00000536823 HOXB3P14651 431 aaPredicted RBP13.53□□□□□ -0.24
YBX3-206ENST00000536823 ZNF710Q8N1W2 664 aa13.52□□□□□ -0.25
YBX3-206ENST00000536823 BOLA1Q9Y3E2 137 aa13.51□□□□□ -0.25
YBX3-206ENST00000536823 HOXB1P14653 301 aaPredicted RBP13.5□□□□□ -0.25
YBX3-206ENST00000536823 PDAP1Q13442 181 aaKnown RBP13.5□□□□□ -0.25
YBX3-206ENST00000536823 SMARCA4P51532 1647 aa13.49□□□□□ -0.25
YBX3-206ENST00000536823 ERBB3P21860 1342 aa13.48□□□□□ -0.25
YBX3-206ENST00000536823 RNF166Q96A37 237 aaPredicted RBP13.48□□□□□ -0.25
YBX3-206ENST00000536823 CABP2Q9NPB3 220 aa13.47□□□□□ -0.25
YBX3-206ENST00000536823 DOK7Q18PE1 504 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms