RNA–Protein interactions for RNA: ENST00000536461.5

KDM4B-203, Transcript of lysine demethylase 4B, humanhuman

TSL 1 (best) BASIC

Gene KDM4B, Length 5,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-203ENST00000536461 C14orf37Q86TY3 774 aa21.94■■□□□ 1.1
KDM4B-203ENST00000536461 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
KDM4B-203ENST00000536461 CUX2O14529 1486 aa21.89■■□□□ 1.09
KDM4B-203ENST00000536461 CEP162Q5TB80 1403 aa21.87■■□□□ 1.09
KDM4B-203ENST00000536461 CARMIL1Q5VZK9 1371 aa21.87■■□□□ 1.09
KDM4B-203ENST00000536461 NPM2Q86SE8 214 aaKnown RBP21.85■■□□□ 1.09
KDM4B-203ENST00000536461 EIF5BO60841 1220 aaKnown RBP21.85■■□□□ 1.09
KDM4B-203ENST00000536461 TNIKQ9UKE5 1360 aa21.85■■□□□ 1.09
KDM4B-203ENST00000536461 SENP3Q9H4L4 574 aaPredicted RBP21.84■■□□□ 1.09
KDM4B-203ENST00000536461 CEP164Q9UPV0 1460 aa21.84■■□□□ 1.09
KDM4B-203ENST00000536461 DDX10Q13206 875 aaKnown RBP21.82■■□□□ 1.08
KDM4B-203ENST00000536461 HNRNPUQ00839 825 aaKnown RBP eCLIP21.82■■□□□ 1.08
KDM4B-203ENST00000536461 ANP32EQ9BTT0 268 aa21.82■■□□□ 1.08
KDM4B-203ENST00000536461 BCL11AQ9H165 835 aa21.8■■□□□ 1.08
KDM4B-203ENST00000536461 EIF4G1Q04637 1599 aaKnown RBP21.79■■□□□ 1.08
KDM4B-203ENST00000536461 SOGA1O94964 1423 aa21.78■■□□□ 1.08
KDM4B-203ENST00000536461 MROH2BQ7Z745 1585 aa21.77■■□□□ 1.08
KDM4B-203ENST00000536461 TDRD9Q8NDG6 1382 aaKnown RBP21.76■■□□□ 1.07
KDM4B-203ENST00000536461 CADPSQ9ULU8 1353 aa21.76■■□□□ 1.07
KDM4B-203ENST00000536461 CARMIL2Q6F5E8 1435 aa21.74■■□□□ 1.07
KDM4B-203ENST00000536461 RGL3Q3MIN7 710 aa21.73■■□□□ 1.07
KDM4B-203ENST00000536461 NBR1Q14596 966 aa21.73■■□□□ 1.07
KDM4B-203ENST00000536461 CCDC88BA6NC98 1476 aa21.72■■□□□ 1.07
KDM4B-203ENST00000536461 PLEKHG5O94827 1062 aa21.71■■□□□ 1.07
KDM4B-203ENST00000536461 A0A0G2JS52 829 aa21.7■■□□□ 1.07
KDM4B-203ENST00000536461 CCNB3Q8WWL7 1395 aa21.7■■□□□ 1.06
KDM4B-203ENST00000536461 HAP1P54257 671 aaPredicted RBP21.7■■□□□ 1.06
KDM4B-203ENST00000536461 MLECQ14165 292 aa21.69■■□□□ 1.06
KDM4B-203ENST00000536461 ZBTB7CA1YPR0 619 aa21.67■■□□□ 1.06
KDM4B-203ENST00000536461 FHAD1B1AJZ9 1412 aa21.66■■□□□ 1.06
KDM4B-203ENST00000536461 TMC1Q8TDI8 760 aa21.62■■□□□ 1.05
KDM4B-203ENST00000536461 FAM9BQ8IZU0 186 aa21.61■■□□□ 1.05
KDM4B-203ENST00000536461 EIF4G2P78344 907 aaKnown RBP eCLIP21.61■■□□□ 1.055e-7■■■■■ 38.3
KDM4B-203ENST00000536461 CCDC136Q96JN2 1154 aa21.59■■□□□ 1.05
KDM4B-203ENST00000536461 ATAD2BQ9ULI0 1458 aa21.58■■□□□ 1.05
KDM4B-203ENST00000536461 HDGFP51858 240 aaKnown RBP21.57■■□□□ 1.04
KDM4B-203ENST00000536461 GLIPR1L2Q4G1C9 344 aa21.56■■□□□ 1.04
KDM4B-203ENST00000536461 WDR43Q15061 677 aaKnown RBP eCLIP21.56■■□□□ 1.043e-6■■■□□ 14.8
KDM4B-203ENST00000536461 KANK1Q14678 1352 aa21.55■■□□□ 1.04
KDM4B-203ENST00000536461 IRX6P78412 446 aaPredicted RBP21.54■■□□□ 1.04
KDM4B-203ENST00000536461 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.54■■□□□ 1.04
KDM4B-203ENST00000536461 MRS2Q9HD23 443 aa21.52■■□□□ 1.04
KDM4B-203ENST00000536461 POGKQ9P215 609 aa21.52■■□□□ 1.04
KDM4B-203ENST00000536461 EFCAB2Q5VUJ9 269 aa21.52■■□□□ 1.03
KDM4B-203ENST00000536461 GGT6Q6P531 493 aa21.51■■□□□ 1.03
KDM4B-203ENST00000536461 CDCA8Q53HL2 280 aa21.5■■□□□ 1.03
KDM4B-203ENST00000536461 OSCARQ8IYS5 282 aa21.5■■□□□ 1.03
KDM4B-203ENST00000536461 LMOD2Q6P5Q4 547 aa21.49■■□□□ 1.03
KDM4B-203ENST00000536461 SALL2Q9Y467 1007 aaPredicted RBP21.48■■□□□ 1.03
KDM4B-203ENST00000536461 SUPT16HQ9Y5B9 1047 aaKnown RBP21.48■■□□□ 1.03
KDM4B-203ENST00000536461 JPH4Q96JJ6 628 aa21.47■■□□□ 1.03
KDM4B-203ENST00000536461 TOP2AP11388 1531 aaKnown RBP21.46■■□□□ 1.03
KDM4B-203ENST00000536461 UPF2Q9HAU5 1272 aaKnown RBP21.45■■□□□ 1.02
KDM4B-203ENST00000536461 CYB5RLQ6IPT4 315 aa21.43■■□□□ 1.02
KDM4B-203ENST00000536461 CARD11Q9BXL7 1154 aa21.4■■□□□ 1.02
KDM4B-203ENST00000536461 FANCD2Q9BXW9 1451 aa21.4■■□□□ 1.02
KDM4B-203ENST00000536461 ANP32BQ92688 251 aaKnown RBP21.4■■□□□ 1.02
KDM4B-203ENST00000536461 ABCC8Q09428 1581 aa21.37■■□□□ 1.01
KDM4B-203ENST00000536461 HIRIP3Q9BW71 556 aaPredicted RBP21.37■■□□□ 1.01
KDM4B-203ENST00000536461 FMN1Q68DA7 1419 aa21.36■■□□□ 1.01
KDM4B-203ENST00000536461 CFAP53Q96M91 514 aa21.36■■□□□ 1.01
KDM4B-203ENST00000536461 TIMELESSQ9UNS1 1208 aa21.36■■□□□ 1.01
KDM4B-203ENST00000536461 WIZO95785 1651 aa21.35■■□□□ 1.01
KDM4B-203ENST00000536461 PPM1GO15355 546 aaPredicted RBP21.34■■□□□ 1.01
KDM4B-203ENST00000536461 KNSTRNQ9Y448 316 aa21.34■■□□□ 1.01
KDM4B-203ENST00000536461 SMARCA4P51532 1647 aa21.32■■□□□ 1
KDM4B-203ENST00000536461 VPS8Q8N3P4 1428 aa21.31■■□□□ 1
KDM4B-203ENST00000536461 HSP90AA1P07900 732 aaKnown RBP21.27■■□□□ 1
KDM4B-203ENST00000536461 RAPGEF2Q9Y4G8 1499 aa21.27■■□□□ 1
KDM4B-203ENST00000536461 DCAF11Q8TEB1 546 aa21.25■□□□□ 0.99
KDM4B-203ENST00000536461 KIF3BO15066 747 aa21.23■□□□□ 0.99
KDM4B-203ENST00000536461 ARXQ96QS3 562 aa21.23■□□□□ 0.99
KDM4B-203ENST00000536461 PTPRGP23470 1445 aa21.22■□□□□ 0.99
KDM4B-203ENST00000536461 ARHGAP35Q9NRY4 1499 aa21.22■□□□□ 0.99
KDM4B-203ENST00000536461 DDRGK1Q96HY6 314 aa21.22■□□□□ 0.99
KDM4B-203ENST00000536461 SPAG9O60271 1321 aaKnown RBP21.21■□□□□ 0.99
KDM4B-203ENST00000536461 RSPH4AQ5TD94 716 aa21.21■□□□□ 0.99
KDM4B-203ENST00000536461 NUDCQ9Y266 331 aa21.19■□□□□ 0.98
KDM4B-203ENST00000536461 PPP4R2Q9NY27 417 aa21.18■□□□□ 0.98
KDM4B-203ENST00000536461 SRPK2P78362 688 aaKnown RBP21.17■□□□□ 0.98
KDM4B-203ENST00000536461 NOP58Q9Y2X3 529 aaKnown RBP21.17■□□□□ 0.98
KDM4B-203ENST00000536461 PKD2Q13563 968 aa21.17■□□□□ 0.98
KDM4B-203ENST00000536461 SIN3AQ96ST3 1273 aa21.17■□□□□ 0.98
KDM4B-203ENST00000536461 HNRNPMP52272 730 aaKnown RBP eCLIP21.16■□□□□ 0.986e-7■■■■□ 19.6
KDM4B-203ENST00000536461 ANKRD30AQ9BXX3 1397 aa21.16■□□□□ 0.98
KDM4B-203ENST00000536461 NCAPD3P42695 1498 aa21.16■□□□□ 0.98
KDM4B-203ENST00000536461 RBM19Q9Y4C8 960 aaKnown RBP21.16■□□□□ 0.98
KDM4B-203ENST00000536461 EID1Q9Y6B2 187 aa21.16■□□□□ 0.98
KDM4B-203ENST00000536461 SAFB2Q14151 953 aaKnown RBP eCLIP21.15■□□□□ 0.981e-6■■□□□ 11.5
KDM4B-203ENST00000536461 WASHC2CQ9Y4E1 1318 aa21.14■□□□□ 0.98
KDM4B-203ENST00000536461 MYH16Q9H6N6 1097 aa21.14■□□□□ 0.98
KDM4B-203ENST00000536461 STK26Q9P289 416 aa21.14■□□□□ 0.97
KDM4B-203ENST00000536461 SETD5Q9C0A6 1442 aa21.13■□□□□ 0.97
KDM4B-203ENST00000536461 FHOD3Q2V2M9 1422 aa21.13■□□□□ 0.97
KDM4B-203ENST00000536461 TMF1P82094 1093 aa21.12■□□□□ 0.97
KDM4B-203ENST00000536461 KANK4Q5T7N3 995 aaPredicted RBP21.12■□□□□ 0.97
KDM4B-203ENST00000536461 MAPK8IP3Q9UPT6 1336 aa21.11■□□□□ 0.97
KDM4B-203ENST00000536461 NUP155O75694 1391 aa21.11■□□□□ 0.97
KDM4B-203ENST00000536461 RTN4Q9NQC3 1192 aaKnown RBP21.1■□□□□ 0.97
KDM4B-203ENST00000536461 DEKP35659 375 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms