RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 FKBP8Q14318 412 aa10.07□□□□□ -0.8
VPS33A-203ENST00000536212 ASTLQ6HA08 431 aaPredicted RBP10.07□□□□□ -0.8
VPS33A-203ENST00000536212 METRNQ9UJH8 293 aa10.04□□□□□ -0.8
VPS33A-203ENST00000536212 CCDC180Q9P1Z9 1646 aa10.04□□□□□ -0.8
VPS33A-203ENST00000536212 C7P10643 843 aa10.03□□□□□ -0.8
VPS33A-203ENST00000536212 SLC39A7Q92504 469 aa10.03□□□□□ -0.8
VPS33A-203ENST00000536212 SPDYE4A6NLX3 237 aa10.02□□□□□ -0.81
VPS33A-203ENST00000536212 ATMINO43313 823 aaPredicted RBP10.02□□□□□ -0.81
VPS33A-203ENST00000536212 POTEJP0CG39 1038 aa10.02□□□□□ -0.81
VPS33A-203ENST00000536212 MAMSTRQ6ZN01 415 aa10.01□□□□□ -0.81
VPS33A-203ENST00000536212 ZCCHC6Q5VYS8 1495 aaKnown RBP10.01□□□□□ -0.81
VPS33A-203ENST00000536212 MS4A3Q96HJ5 214 aa10□□□□□ -0.81
VPS33A-203ENST00000536212 LCE2DQ5TA82 110 aaPredicted RBP9.95□□□□□ -0.82
VPS33A-203ENST00000536212 SCUBE2Q9NQ36 999 aa9.91□□□□□ -0.82
VPS33A-203ENST00000536212 SHROOM4Q9ULL8 1493 aa9.91□□□□□ -0.82
VPS33A-203ENST00000536212 ATN1P54259 1190 aaPredicted RBP9.88□□□□□ -0.83
VPS33A-203ENST00000536212 FAM163AQ96GL9 167 aaPredicted RBP9.88□□□□□ -0.83
VPS33A-203ENST00000536212 CCDC61Q9Y6R9 512 aa9.87□□□□□ -0.83
VPS33A-203ENST00000536212 AMER1Q5JTC6 1135 aaPredicted RBP9.86□□□□□ -0.83
VPS33A-203ENST00000536212 POTEFA5A3E0 1075 aa9.84□□□□□ -0.83
VPS33A-203ENST00000536212 TSPYL2Q9H2G4 693 aaPredicted RBP9.84□□□□□ -0.83
VPS33A-203ENST00000536212 KIF12Q96FN5 646 aa9.83□□□□□ -0.84
VPS33A-203ENST00000536212 RTN4Q9NQC3 1192 aaKnown RBP9.81□□□□□ -0.84
VPS33A-203ENST00000536212 BMP2KQ9NSY1 1161 aaPredicted RBP9.81□□□□□ -0.84
VPS33A-203ENST00000536212 TIE1P35590 1138 aa9.78□□□□□ -0.84
VPS33A-203ENST00000536212 DCAF1Q9Y4B6 1507 aa9.77□□□□□ -0.84
VPS33A-203ENST00000536212 PROM2Q8N271 834 aa9.77□□□□□ -0.85
VPS33A-203ENST00000536212 TRPC6Q9Y210 931 aa9.76□□□□□ -0.85
VPS33A-203ENST00000536212 SUPT5HO00267 1087 aaKnown RBP9.74□□□□□ -0.85
VPS33A-203ENST00000536212 MAP3K13O43283 966 aa9.73□□□□□ -0.85
VPS33A-203ENST00000536212 COLQQ9Y215 455 aaPredicted RBP9.72□□□□□ -0.85
VPS33A-203ENST00000536212 CDAN1Q8IWY9 1227 aa9.71□□□□□ -0.86
VPS33A-203ENST00000536212 TTLL13PA6NNM8 815 aa9.7□□□□□ -0.86
VPS33A-203ENST00000536212 SEC24BO95487 1268 aa9.69□□□□□ -0.86
VPS33A-203ENST00000536212 IER5LQ5T953 404 aa9.68□□□□□ -0.86
VPS33A-203ENST00000536212 RASEFQ8IZ41 740 aa9.66□□□□□ -0.86
VPS33A-203ENST00000536212 SGIP1Q9BQI5 828 aa9.65□□□□□ -0.86
VPS33A-203ENST00000536212 PLEKHG5O94827 1062 aa9.64□□□□□ -0.87
VPS33A-203ENST00000536212 FBXO3Q9UK99 471 aa9.64□□□□□ -0.87
VPS33A-203ENST00000536212 TRIM35Q9UPQ4 493 aa9.63□□□□□ -0.87
VPS33A-203ENST00000536212 ST18O60284 1047 aa9.61□□□□□ -0.87
VPS33A-203ENST00000536212 MIER1Q8N108 512 aa9.6□□□□□ -0.87
VPS33A-203ENST00000536212 SLAIN1Q8ND83 568 aa9.59□□□□□ -0.87
VPS33A-203ENST00000536212 PCDHB13Q9Y5F0 798 aa9.57□□□□□ -0.88
VPS33A-203ENST00000536212 MYO15BQ96JP2 1530 aa9.56□□□□□ -0.88
VPS33A-203ENST00000536212 DCAF8L2P0C7V8 631 aa9.54□□□□□ -0.88
VPS33A-203ENST00000536212 MMRN1Q13201 1228 aa9.52□□□□□ -0.89
VPS33A-203ENST00000536212 PLCG2P16885 1265 aa9.51□□□□□ -0.89
VPS33A-203ENST00000536212 IFNL1Q8IU54 200 aa9.51□□□□□ -0.89
VPS33A-203ENST00000536212 TMEM121BQ9BXQ6 578 aaPredicted RBP9.51□□□□□ -0.89
VPS33A-203ENST00000536212 IRX5P78411 483 aaPredicted RBP9.5□□□□□ -0.89
VPS33A-203ENST00000536212 NUBP1P53384 320 aa9.49□□□□□ -0.89
VPS33A-203ENST00000536212 SPNS2Q8IVW8 549 aa9.49□□□□□ -0.89
VPS33A-203ENST00000536212 TMEM106CQ9BVX2 250 aa9.49□□□□□ -0.89
VPS33A-203ENST00000536212 VASPP50552 380 aaPredicted RBP9.48□□□□□ -0.89
VPS33A-203ENST00000536212 ZBTB47Q9UFB7 747 aaPredicted RBP9.47□□□□□ -0.89
VPS33A-203ENST00000536212 PLCD3Q8N3E9 789 aa9.46□□□□□ -0.9
VPS33A-203ENST00000536212 SNPHO15079 494 aa9.45□□□□□ -0.9
VPS33A-203ENST00000536212 OCEL1Q9H607 264 aa9.43□□□□□ -0.9
VPS33A-203ENST00000536212 ABCC9O60706 1549 aa9.42□□□□□ -0.9
VPS33A-203ENST00000536212 FAM212AQ96EL1 285 aa9.42□□□□□ -0.9
VPS33A-203ENST00000536212 HRCP23327 699 aa9.41□□□□□ -0.9
VPS33A-203ENST00000536212 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.4□□□□□ -0.9
VPS33A-203ENST00000536212 MARVELD3Q96A59 401 aa9.37□□□□□ -0.91
VPS33A-203ENST00000536212 IFNLR1Q8IU57 520 aaPredicted RBP9.36□□□□□ -0.91
VPS33A-203ENST00000536212 RSF1Q96T23 1441 aaPredicted RBP9.35□□□□□ -0.91
VPS33A-203ENST00000536212 SCRIBQ14160 1630 aa9.29□□□□□ -0.92
VPS33A-203ENST00000536212 EMP3P54852 163 aa9.28□□□□□ -0.92
VPS33A-203ENST00000536212 PDCD7Q8N8D1 485 aaKnown RBP9.28□□□□□ -0.92
VPS33A-203ENST00000536212 NACADO15069 1562 aa9.28□□□□□ -0.92
VPS33A-203ENST00000536212 PYGBP11216 843 aa9.27□□□□□ -0.93
VPS33A-203ENST00000536212 KRTAP3-3Q9BYR6 98 aa9.27□□□□□ -0.93
VPS33A-203ENST00000536212 KRTAP3-2Q9BYR7 98 aa9.27□□□□□ -0.93
VPS33A-203ENST00000536212 RB1CC1Q8TDY2 1594 aa9.26□□□□□ -0.93
VPS33A-203ENST00000536212 C3orf67Q6ZVT6 689 aa9.26□□□□□ -0.93
VPS33A-203ENST00000536212 PCGF6Q9BYE7 350 aa9.26□□□□□ -0.93
VPS33A-203ENST00000536212 PCDHB8Q9UN66 801 aa9.26□□□□□ -0.93
VPS33A-203ENST00000536212 LOC105371045A0A1W2PR82 267 aa9.25□□□□□ -0.93
VPS33A-203ENST00000536212 DCAF8Q5TAQ9 597 aa9.25□□□□□ -0.93
VPS33A-203ENST00000536212 L3MBTL3Q96JM7 780 aaPredicted RBP9.25□□□□□ -0.93
VPS33A-203ENST00000536212 POTEB3A0JP26 581 aa9.24□□□□□ -0.93
VPS33A-203ENST00000536212 POTEBQ6S5H4 581 aa9.24□□□□□ -0.93
VPS33A-203ENST00000536212 KLHL34Q8N239 644 aa9.24□□□□□ -0.93
VPS33A-203ENST00000536212 HS3ST6Q96QI5 342 aa9.24□□□□□ -0.93
VPS33A-203ENST00000536212 SPOCK2Q92563 424 aa9.21□□□□□ -0.94
VPS33A-203ENST00000536212 FAM205CA6NFA0 338 aa9.2□□□□□ -0.94
VPS33A-203ENST00000536212 MKRN3Q13064 507 aaKnown RBP9.19□□□□□ -0.94
VPS33A-203ENST00000536212 PKD2Q13563 968 aa9.19□□□□□ -0.94
VPS33A-203ENST00000536212 TRIM26Q12899 539 aaPredicted RBP9.18□□□□□ -0.94
VPS33A-203ENST00000536212 ZNF467Q7Z7K2 595 aaPredicted RBP9.18□□□□□ -0.94
VPS33A-203ENST00000536212 GOLGA2Q08379 1002 aa9.16□□□□□ -0.94
VPS33A-203ENST00000536212 CECR2Q9BXF3 1484 aa9.15□□□□□ -0.94
VPS33A-203ENST00000536212 ILDR1Q86SU0 546 aaPredicted RBP9.15□□□□□ -0.94
VPS33A-203ENST00000536212 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.15□□□□□ -0.94
VPS33A-203ENST00000536212 MROH2BQ7Z745 1585 aa9.14□□□□□ -0.95
VPS33A-203ENST00000536212 TRIM41Q8WV44 630 aa9.13□□□□□ -0.95
VPS33A-203ENST00000536212 MYT1Q01538 1121 aa9.12□□□□□ -0.95
VPS33A-203ENST00000536212 CHRM1P11229 460 aaPredicted RBP9.11□□□□□ -0.95
VPS33A-203ENST00000536212 ECM2O94769 699 aaPredicted RBP9.1□□□□□ -0.95
VPS33A-203ENST00000536212 HOXB3P14651 431 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms