RNA–Protein interactions for RNA: ENST00000535887.1

C12orf4-204, Transcript of chromosome 12 open reading frame 4, humanhuman

TSL 3

Gene C12orf4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4-204ENST00000535887 ATMINO43313 823 aaPredicted RBP16.84■□□□□ 0.29
C12orf4-204ENST00000535887 CCDC61Q9Y6R9 512 aa16.83■□□□□ 0.28
C12orf4-204ENST00000535887 POTEJP0CG39 1038 aa16.79■□□□□ 0.28
C12orf4-204ENST00000535887 METRNQ9UJH8 293 aa16.79■□□□□ 0.28
C12orf4-204ENST00000535887 KIF12Q96FN5 646 aa16.74■□□□□ 0.27
C12orf4-204ENST00000535887 SLC39A7Q92504 469 aa16.72■□□□□ 0.27
C12orf4-204ENST00000535887 C7P10643 843 aa16.71■□□□□ 0.27
C12orf4-204ENST00000535887 ATN1P54259 1190 aaPredicted RBP16.71■□□□□ 0.27
C12orf4-204ENST00000535887 PLSCR2Q9NRY7 297 aa16.71■□□□□ 0.27
C12orf4-204ENST00000535887 TRPC6Q9Y210 931 aa16.7■□□□□ 0.26
C12orf4-204ENST00000535887 RASEFQ8IZ41 740 aa16.68■□□□□ 0.26
C12orf4-204ENST00000535887 MIER1Q8N108 512 aa16.67■□□□□ 0.26
C12orf4-204ENST00000535887 FBXO3Q9UK99 471 aa16.64■□□□□ 0.25
C12orf4-204ENST00000535887 MAP3K13O43283 966 aa16.63■□□□□ 0.25
C12orf4-204ENST00000535887 BMP2KQ9NSY1 1161 aaPredicted RBP16.63■□□□□ 0.25
C12orf4-204ENST00000535887 POTEFA5A3E0 1075 aa16.61■□□□□ 0.25
C12orf4-204ENST00000535887 POTEMA6NI47 508 aa16.61■□□□□ 0.25
C12orf4-204ENST00000535887 POTEGQ6S5H5 508 aa16.56■□□□□ 0.24
C12orf4-204ENST00000535887 PLEKHG5O94827 1062 aa16.54■□□□□ 0.24
C12orf4-204ENST00000535887 TIE1P35590 1138 aa16.49■□□□□ 0.23
C12orf4-204ENST00000535887 LCE2DQ5TA82 110 aaPredicted RBP16.49■□□□□ 0.23
C12orf4-204ENST00000535887 MAMSTRQ6ZN01 415 aa16.49■□□□□ 0.23
C12orf4-204ENST00000535887 PLCD3Q8N3E9 789 aa16.48■□□□□ 0.23
C12orf4-204ENST00000535887 TTLL13PA6NNM8 815 aa16.45■□□□□ 0.22
C12orf4-204ENST00000535887 NUBP1P53384 320 aa16.45■□□□□ 0.22
C12orf4-204ENST00000535887 COLQQ9Y215 455 aaPredicted RBP16.44■□□□□ 0.22
C12orf4-204ENST00000535887 SCUBE2Q9NQ36 999 aa16.41■□□□□ 0.22
C12orf4-204ENST00000535887 PCDHB13Q9Y5F0 798 aa16.38■□□□□ 0.21
C12orf4-204ENST00000535887 FAM163AQ96GL9 167 aaPredicted RBP16.36■□□□□ 0.21
C12orf4-204ENST00000535887 SGIP1Q9BQI5 828 aa16.34■□□□□ 0.21
C12orf4-204ENST00000535887 TRIM35Q9UPQ4 493 aa16.34■□□□□ 0.21
C12orf4-204ENST00000535887 VASPP50552 380 aaPredicted RBP16.33■□□□□ 0.2
C12orf4-204ENST00000535887 IFNL1Q8IU54 200 aa16.33■□□□□ 0.2
C12orf4-204ENST00000535887 SEC24BO95487 1268 aa16.3■□□□□ 0.2
C12orf4-204ENST00000535887 ZBTB47Q9UFB7 747 aaPredicted RBP16.28■□□□□ 0.2
C12orf4-204ENST00000535887 IER5LQ5T953 404 aa16.24■□□□□ 0.19
C12orf4-204ENST00000535887 PCDH10Q9P2E7 1040 aa16.23■□□□□ 0.19
C12orf4-204ENST00000535887 FAM212AQ96EL1 285 aa16.22■□□□□ 0.19
C12orf4-204ENST00000535887 TMEM106CQ9BVX2 250 aa16.21■□□□□ 0.19
C12orf4-204ENST00000535887 PYGBP11216 843 aa16.12■□□□□ 0.17
C12orf4-204ENST00000535887 IRX5P78411 483 aaPredicted RBP16.1■□□□□ 0.17
C12orf4-204ENST00000535887 IFNLR1Q8IU57 520 aaPredicted RBP16.1■□□□□ 0.17
C12orf4-204ENST00000535887 DCAF8Q5TAQ9 597 aa16.09■□□□□ 0.17
C12orf4-204ENST00000535887 SLAIN1Q8ND83 568 aa16.07■□□□□ 0.16
C12orf4-204ENST00000535887 PLCG2P16885 1265 aa16.06■□□□□ 0.16
C12orf4-204ENST00000535887 PCDHB8Q9UN66 801 aa16.06■□□□□ 0.16
C12orf4-204ENST00000535887 KLHL34Q8N239 644 aa16.03■□□□□ 0.16
C12orf4-204ENST00000535887 ST18O60284 1047 aa16■□□□□ 0.15
C12orf4-204ENST00000535887 CDAN1Q8IWY9 1227 aa15.98■□□□□ 0.15
C12orf4-204ENST00000535887 OCEL1Q9H607 264 aa15.96■□□□□ 0.15
C12orf4-204ENST00000535887 SPOCK2Q92563 424 aa15.95■□□□□ 0.14
C12orf4-204ENST00000535887 PDCD7Q8N8D1 485 aaKnown RBP15.84■□□□□ 0.13
C12orf4-204ENST00000535887 GSE1Q14687 1217 aa15.8■□□□□ 0.12
C12orf4-204ENST00000535887 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.8■□□□□ 0.12
C12orf4-204ENST00000535887 ZNF467Q7Z7K2 595 aaPredicted RBP15.77■□□□□ 0.12
C12orf4-204ENST00000535887 CHRM1P11229 460 aaPredicted RBP15.76■□□□□ 0.11
C12orf4-204ENST00000535887 MARVELD3Q96A59 401 aa15.72■□□□□ 0.11
C12orf4-204ENST00000535887 PSEN1P49768 467 aa15.71■□□□□ 0.11
C12orf4-204ENST00000535887 TMEM121BQ9BXQ6 578 aaPredicted RBP15.71■□□□□ 0.11
C12orf4-204ENST00000535887 MKRN3Q13064 507 aaKnown RBP15.7■□□□□ 0.1
C12orf4-204ENST00000535887 SNPHO15079 494 aa15.69■□□□□ 0.1
C12orf4-204ENST00000535887 GOLGA2Q08379 1002 aa15.67■□□□□ 0.1
C12orf4-204ENST00000535887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.67■□□□□ 0.1
C12orf4-204ENST00000535887 TRIM41Q8WV44 630 aa15.66■□□□□ 0.1
C12orf4-204ENST00000535887 C3orf67Q6ZVT6 689 aa15.64■□□□□ 0.09
C12orf4-204ENST00000535887 CIZ1Q9ULV3 898 aaPredicted RBP15.64■□□□□ 0.09
C12orf4-204ENST00000535887 DPY19L2Q6NUT2 758 aa15.63■□□□□ 0.09
C12orf4-204ENST00000535887 ILDR1Q86SU0 546 aaPredicted RBP15.63■□□□□ 0.09
C12orf4-204ENST00000535887 L3MBTL3Q96JM7 780 aaPredicted RBP15.63■□□□□ 0.09
C12orf4-204ENST00000535887 SPNS2Q8IVW8 549 aa15.61■□□□□ 0.09
C12orf4-204ENST00000535887 MMRN1Q13201 1228 aa15.59■□□□□ 0.09
C12orf4-204ENST00000535887 PDAP1Q13442 181 aaKnown RBP15.58■□□□□ 0.08
C12orf4-204ENST00000535887 POTEB3A0JP26 581 aa15.56■□□□□ 0.08
C12orf4-204ENST00000535887 POTEBQ6S5H4 581 aa15.56■□□□□ 0.08
C12orf4-204ENST00000535887 CABP2Q9NPB3 220 aa15.54■□□□□ 0.08
C12orf4-204ENST00000535887 PKD2Q13563 968 aa15.52■□□□□ 0.08
C12orf4-204ENST00000535887 EMP3P54852 163 aa15.51■□□□□ 0.07
C12orf4-204ENST00000535887 HS3ST6Q96QI5 342 aa15.45■□□□□ 0.06
C12orf4-204ENST00000535887 KRTAP3-3Q9BYR6 98 aa15.45■□□□□ 0.06
C12orf4-204ENST00000535887 KRTAP3-2Q9BYR7 98 aa15.45■□□□□ 0.06
C12orf4-204ENST00000535887 FAM205CA6NFA0 338 aa15.44■□□□□ 0.06
C12orf4-204ENST00000535887 BOLA1Q9Y3E2 137 aa15.44■□□□□ 0.06
C12orf4-204ENST00000535887 HOXB3P14651 431 aaPredicted RBP15.42■□□□□ 0.06
C12orf4-204ENST00000535887 AMER1Q5JTC6 1135 aaPredicted RBP15.42■□□□□ 0.06
C12orf4-204ENST00000535887 ECM2O94769 699 aaPredicted RBP15.4■□□□□ 0.06
C12orf4-204ENST00000535887 EFCAB3Q8N7B9 438 aa15.35■□□□□ 0.05
C12orf4-204ENST00000535887 G3V3G9 751 aa15.32■□□□□ 0.04
C12orf4-204ENST00000535887 RIOK3O14730 519 aaKnown RBP15.32■□□□□ 0.04
C12orf4-204ENST00000535887 RNF25Q96BH1 459 aaPredicted RBP15.31■□□□□ 0.04
C12orf4-204ENST00000535887 RTN4Q9NQC3 1192 aaKnown RBP15.28■□□□□ 0.04
C12orf4-204ENST00000535887 TAOK2Q9UL54 1235 aa15.28■□□□□ 0.04
C12orf4-204ENST00000535887 HOXB1P14653 301 aaPredicted RBP15.27■□□□□ 0.04
C12orf4-204ENST00000535887 RGL2O15211 777 aa15.25■□□□□ 0.03
C12orf4-204ENST00000535887 TMEM92Q6UXU6 159 aa15.25■□□□□ 0.03
C12orf4-204ENST00000535887 VGFO15240 615 aaPredicted RBP15.24■□□□□ 0.03
C12orf4-204ENST00000535887 ZNF710Q8N1W2 664 aa15.22■□□□□ 0.03
C12orf4-204ENST00000535887 DOK7Q18PE1 504 aa15.19■□□□□ 0.02
C12orf4-204ENST00000535887 MICALL2Q8IY33 904 aa15.19■□□□□ 0.02
C12orf4-204ENST00000535887 MS4A4AQ96JQ5 239 aa15.18■□□□□ 0.02
C12orf4-204ENST00000535887 ERBB3P21860 1342 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms