RNA–Protein interactions for RNA: ENST00000535118.1

LINC00943-202, long intergenic non-protein coding RNA 943, humanhuman

TSL 2

Gene LINC00943, Length 458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-202ENST00000535118 CD44P16070 742 aaKnown RBP9.75□□□□□ -0.85
LINC00943-202ENST00000535118 BBXQ8WY36 941 aaPredicted RBP9.74□□□□□ -0.85
LINC00943-202ENST00000535118 BCANQ96GW7 911 aa9.74□□□□□ -0.85
LINC00943-202ENST00000535118 SPDYE2BA6NHP3 402 aa9.73□□□□□ -0.85
LINC00943-202ENST00000535118 SPDYE6P0CI01 402 aa9.73□□□□□ -0.85
LINC00943-202ENST00000535118 SPDYE2Q495Y8 402 aa9.73□□□□□ -0.85
LINC00943-202ENST00000535118 SSUH2Q9Y2M2 353 aa9.73□□□□□ -0.85
LINC00943-202ENST00000535118 MAMSTRQ6ZN01 415 aa9.72□□□□□ -0.85
LINC00943-202ENST00000535118 PLCD3Q8N3E9 789 aa9.71□□□□□ -0.86
LINC00943-202ENST00000535118 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.71□□□□□ -0.86
LINC00943-202ENST00000535118 NPM1P06748 294 aaKnown RBP eCLIP9.7□□□□□ -0.86
LINC00943-202ENST00000535118 CLEC11AQ9Y240 323 aa9.7□□□□□ -0.86
LINC00943-202ENST00000535118 CHADLQ6NUI6 762 aa9.69□□□□□ -0.86
LINC00943-202ENST00000535118 POTEJP0CG39 1038 aa9.67□□□□□ -0.86
LINC00943-202ENST00000535118 PABPN1Q86U42 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
LINC00943-202ENST00000535118 RGL2O15211 777 aa9.66□□□□□ -0.86
LINC00943-202ENST00000535118 MIER1Q8N108 512 aa9.66□□□□□ -0.86
LINC00943-202ENST00000535118 PAXIP1Q6ZW49 1069 aaPredicted RBP9.65□□□□□ -0.86
LINC00943-202ENST00000535118 SPDYE1Q8NFV5 336 aaPredicted RBP9.64□□□□□ -0.87
LINC00943-202ENST00000535118 KDM2AQ9Y2K7 1162 aa9.64□□□□□ -0.87
LINC00943-202ENST00000535118 CFAP44Q96MT7 982 aa9.63□□□□□ -0.87
LINC00943-202ENST00000535118 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
LINC00943-202ENST00000535118 TAOK2Q9UL54 1235 aa9.6□□□□□ -0.87
LINC00943-202ENST00000535118 SPRYD3Q8NCJ5 442 aa9.56□□□□□ -0.88
LINC00943-202ENST00000535118 ZBTB47Q9UFB7 747 aaPredicted RBP9.56□□□□□ -0.88
LINC00943-202ENST00000535118 CIZ1Q9ULV3 898 aaPredicted RBP9.56□□□□□ -0.88
LINC00943-202ENST00000535118 PLEKHG5O94827 1062 aa9.54□□□□□ -0.88
LINC00943-202ENST00000535118 ZNF579Q8NAF0 562 aaKnown RBP9.53□□□□□ -0.88
LINC00943-202ENST00000535118 SCUBE2Q9NQ36 999 aa9.53□□□□□ -0.88
LINC00943-202ENST00000535118 GALR2O43603 387 aaPredicted RBP9.52□□□□□ -0.89
LINC00943-202ENST00000535118 CHGAP10645 457 aaKnown RBP9.52□□□□□ -0.89
LINC00943-202ENST00000535118 PELP1Q8IZL8 1130 aaKnown RBP9.51□□□□□ -0.89
LINC00943-202ENST00000535118 TSHZ2Q9NRE2 1034 aa9.51□□□□□ -0.89
LINC00943-202ENST00000535118 TRIM41Q8WV44 630 aa9.5□□□□□ -0.89
LINC00943-202ENST00000535118 TPRNQ4KMQ1 711 aa9.46□□□□□ -0.9
LINC00943-202ENST00000535118 METRNQ9UJH8 293 aa9.45□□□□□ -0.9
LINC00943-202ENST00000535118 HS6ST3Q8IZP7 471 aa9.44□□□□□ -0.9
LINC00943-202ENST00000535118 GSE1Q14687 1217 aa9.41□□□□□ -0.9
LINC00943-202ENST00000535118 DNAJC5Q9H3Z4 198 aa9.41□□□□□ -0.9
LINC00943-202ENST00000535118 C7P10643 843 aa9.4□□□□□ -0.9
LINC00943-202ENST00000535118 RNF25Q96BH1 459 aaPredicted RBP9.4□□□□□ -0.9
LINC00943-202ENST00000535118 FARP1Q9Y4F1 1045 aaPredicted RBP9.39□□□□□ -0.91
LINC00943-202ENST00000535118 NUBP1P53384 320 aa9.38□□□□□ -0.91
LINC00943-202ENST00000535118 SLC39A7Q92504 469 aa9.36□□□□□ -0.91
LINC00943-202ENST00000535118 ZRANB1Q9UGI0 708 aa9.35□□□□□ -0.91
LINC00943-202ENST00000535118 RIOK3O14730 519 aaKnown RBP9.32□□□□□ -0.92
LINC00943-202ENST00000535118 ST18O60284 1047 aa9.32□□□□□ -0.92
LINC00943-202ENST00000535118 PRR29P0C7W0 189 aa9.32□□□□□ -0.92
LINC00943-202ENST00000535118 NKX1-1Q15270 411 aaPredicted RBP9.32□□□□□ -0.92
LINC00943-202ENST00000535118 DCAF8Q5TAQ9 597 aa9.31□□□□□ -0.92
LINC00943-202ENST00000535118 NBR1Q14596 966 aa9.3□□□□□ -0.92
LINC00943-202ENST00000535118 GTPBP6O43824 516 aaPredicted RBP9.27□□□□□ -0.93
LINC00943-202ENST00000535118 FAM212AQ96EL1 285 aa9.27□□□□□ -0.93
LINC00943-202ENST00000535118 CREBZFQ9NS37 354 aa9.27□□□□□ -0.93
LINC00943-202ENST00000535118 MNX1P50219 401 aaPredicted RBP9.26□□□□□ -0.93
LINC00943-202ENST00000535118 VGFO15240 615 aaPredicted RBP9.25□□□□□ -0.93
LINC00943-202ENST00000535118 STK25O00506 426 aa9.24□□□□□ -0.93
LINC00943-202ENST00000535118 CHRM1P11229 460 aaPredicted RBP9.24□□□□□ -0.93
LINC00943-202ENST00000535118 ASTLQ6HA08 431 aaPredicted RBP9.23□□□□□ -0.93
LINC00943-202ENST00000535118 SGIP1Q9BQI5 828 aa9.22□□□□□ -0.93
LINC00943-202ENST00000535118 RASEFQ8IZ41 740 aa9.2□□□□□ -0.94
LINC00943-202ENST00000535118 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.17□□□□□ -0.94
LINC00943-202ENST00000535118 ZFP91Q96JP5 570 aaPredicted RBP9.17□□□□□ -0.94
LINC00943-202ENST00000535118 ATMINO43313 823 aaPredicted RBP9.16□□□□□ -0.94
LINC00943-202ENST00000535118 BCL11BQ9C0K0 894 aaPredicted RBP9.16□□□□□ -0.94
LINC00943-202ENST00000535118 STK24Q9Y6E0 443 aa9.16□□□□□ -0.94
LINC00943-202ENST00000535118 RYDENQ9NUL5 291 aaKnown RBP9.14□□□□□ -0.95
LINC00943-202ENST00000535118 PYGBP11216 843 aa9.13□□□□□ -0.95
LINC00943-202ENST00000535118 TMEM121BQ9BXQ6 578 aaPredicted RBP9.1□□□□□ -0.95
LINC00943-202ENST00000535118 POTEFA5A3E0 1075 aa9.05□□□□□ -0.96
LINC00943-202ENST00000535118 PHF12Q96QT6 1004 aa9.05□□□□□ -0.96
LINC00943-202ENST00000535118 P3H3Q8IVL6 736 aa9.03□□□□□ -0.96
LINC00943-202ENST00000535118 KRTAP3-3Q9BYR6 98 aa9.02□□□□□ -0.97
LINC00943-202ENST00000535118 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.97
LINC00943-202ENST00000535118 ZNF467Q7Z7K2 595 aaPredicted RBP9.01□□□□□ -0.97
LINC00943-202ENST00000535118 CADPS2Q86UW7 1296 aa8.99□□□□□ -0.97
LINC00943-202ENST00000535118 PDAP1Q13442 181 aaKnown RBP8.98□□□□□ -0.97
LINC00943-202ENST00000535118 TSPYL2Q9H2G4 693 aaPredicted RBP8.98□□□□□ -0.97
LINC00943-202ENST00000535118 SLAIN1Q8ND83 568 aa8.96□□□□□ -0.98
LINC00943-202ENST00000535118 KCNV2Q8TDN2 545 aa8.96□□□□□ -0.98
LINC00943-202ENST00000535118 MARVELD3Q96A59 401 aa8.96□□□□□ -0.98
LINC00943-202ENST00000535118 WDR70Q9NW82 654 aa8.96□□□□□ -0.98
LINC00943-202ENST00000535118 PCDHB8Q9UN66 801 aa8.93□□□□□ -0.98
LINC00943-202ENST00000535118 PCDHB13Q9Y5F0 798 aa8.93□□□□□ -0.98
LINC00943-202ENST00000535118 ATN1P54259 1190 aaPredicted RBP8.92□□□□□ -0.98
LINC00943-202ENST00000535118 MFRPQ9BY79 579 aa8.92□□□□□ -0.98
LINC00943-202ENST00000535118 TIMELESSQ9UNS1 1208 aa8.92□□□□□ -0.98
LINC00943-202ENST00000535118 GTF3C3Q9Y5Q9 886 aa8.92□□□□□ -0.98
LINC00943-202ENST00000535118 PAK3O75914 559 aaPredicted RBP8.91□□□□□ -0.98
LINC00943-202ENST00000535118 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.91□□□□□ -0.98
LINC00943-202ENST00000535118 RNF166Q96A37 237 aaPredicted RBP8.91□□□□□ -0.98
LINC00943-202ENST00000535118 TULP1O00294 542 aaPredicted RBP8.9□□□□□ -0.98
LINC00943-202ENST00000535118 PSEN1P49768 467 aa8.9□□□□□ -0.98
LINC00943-202ENST00000535118 TMEM132AQ24JP5 1023 aa8.9□□□□□ -0.98
LINC00943-202ENST00000535118 LMOD2Q6P5Q4 547 aa8.9□□□□□ -0.98
LINC00943-202ENST00000535118 CCDC61Q9Y6R9 512 aa8.9□□□□□ -0.98
LINC00943-202ENST00000535118 MS4A3Q96HJ5 214 aa8.88□□□□□ -0.99
LINC00943-202ENST00000535118 PPP1R37O75864 691 aa8.84□□□□□ -0.99
LINC00943-202ENST00000535118 FBXO22Q8NEZ5 403 aa8.83□□□□□ -1
LINC00943-202ENST00000535118 ARHGEF1Q92888 912 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms