RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 FBLN2P98095 1184 aa5.85□□□□□ -1.47
COPB1-212ENST00000534771 PAK3O75914 559 aaPredicted RBP5.84□□□□□ -1.47
COPB1-212ENST00000534771 ATN1P54259 1190 aaPredicted RBP5.84□□□□□ -1.47
COPB1-212ENST00000534771 TMEM121BQ9BXQ6 578 aaPredicted RBP5.83□□□□□ -1.48
COPB1-212ENST00000534771 KRTAP3-3Q9BYR6 98 aa5.83□□□□□ -1.48
COPB1-212ENST00000534771 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
COPB1-212ENST00000534771 PABPN1Q86U42 306 aaKnown RBP eCLIP5.82□□□□□ -1.48
COPB1-212ENST00000534771 MS4A3Q96HJ5 214 aa5.82□□□□□ -1.48
COPB1-212ENST00000534771 SEC24BO95487 1268 aa5.77□□□□□ -1.49
COPB1-212ENST00000534771 RNF166Q96A37 237 aaPredicted RBP5.77□□□□□ -1.49
COPB1-212ENST00000534771 COLQQ9Y215 455 aaPredicted RBP5.76□□□□□ -1.49
COPB1-212ENST00000534771 POTEB3A0JP26 581 aa5.74□□□□□ -1.49
COPB1-212ENST00000534771 POTEBQ6S5H4 581 aa5.74□□□□□ -1.49
COPB1-212ENST00000534771 EMP3P54852 163 aa5.72□□□□□ -1.49
COPB1-212ENST00000534771 HS3ST6Q96QI5 342 aa5.7□□□□□ -1.5
COPB1-212ENST00000534771 CREBZFQ9NS37 354 aa5.7□□□□□ -1.5
COPB1-212ENST00000534771 FAM205CA6NFA0 338 aa5.69□□□□□ -1.5
COPB1-212ENST00000534771 SNPHO15079 494 aa5.69□□□□□ -1.5
COPB1-212ENST00000534771 MKRN4PQ13434 485 aaPredicted RBP5.67□□□□□ -1.5
COPB1-212ENST00000534771 BMP2KQ9NSY1 1161 aaPredicted RBP5.66□□□□□ -1.5
COPB1-212ENST00000534771 MYT1LQ9UL68 1186 aa5.64□□□□□ -1.51
COPB1-212ENST00000534771 TRPC6Q9Y210 931 aa5.6□□□□□ -1.51
COPB1-212ENST00000534771 NPM1P06748 294 aaKnown RBP eCLIP5.56□□□□□ -1.52
COPB1-212ENST00000534771 PLA2G2EQ9NZK7 142 aa5.56□□□□□ -1.52
COPB1-212ENST00000534771 TIE1P35590 1138 aa5.53□□□□□ -1.52
COPB1-212ENST00000534771 KCNA4P22459 653 aa5.52□□□□□ -1.53
COPB1-212ENST00000534771 TTLL13PA6NNM8 815 aa5.51□□□□□ -1.53
COPB1-212ENST00000534771 IER5LQ5T953 404 aa5.51□□□□□ -1.53
COPB1-212ENST00000534771 KIF12Q96FN5 646 aa5.5□□□□□ -1.53
COPB1-212ENST00000534771 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.5□□□□□ -1.53
COPB1-212ENST00000534771 TSPYL2Q9H2G4 693 aaPredicted RBP5.49□□□□□ -1.53
COPB1-212ENST00000534771 TRIM35Q9UPQ4 493 aa5.49□□□□□ -1.53
COPB1-212ENST00000534771 IRX2Q9BZI1 471 aaPredicted RBP5.48□□□□□ -1.53
COPB1-212ENST00000534771 PLCG2P16885 1265 aa5.47□□□□□ -1.53
COPB1-212ENST00000534771 MNX1P50219 401 aaPredicted RBP5.44□□□□□ -1.54
COPB1-212ENST00000534771 MAP3K13O43283 966 aa5.43□□□□□ -1.54
COPB1-212ENST00000534771 CCDC61Q9Y6R9 512 aa5.43□□□□□ -1.54
COPB1-212ENST00000534771 FOXD4L1Q9NU39 408 aa5.42□□□□□ -1.54
COPB1-212ENST00000534771 ERBB3P21860 1342 aa5.41□□□□□ -1.54
COPB1-212ENST00000534771 PTGER2P43116 358 aa5.39□□□□□ -1.55
COPB1-212ENST00000534771 STAG3Q9UJ98 1225 aa5.39□□□□□ -1.55
COPB1-212ENST00000534771 IRX5P78411 483 aaPredicted RBP5.36□□□□□ -1.55
COPB1-212ENST00000534771 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
COPB1-212ENST00000534771 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
COPB1-212ENST00000534771 ANKRD13DQ6ZTN6 518 aa5.34□□□□□ -1.55
COPB1-212ENST00000534771 Q6ZNB5 142 aa5.33□□□□□ -1.56
COPB1-212ENST00000534771 OCEL1Q9H607 264 aa5.33□□□□□ -1.56
COPB1-212ENST00000534771 ATXN8OSP0DMR3 200 aa5.31□□□□□ -1.56
COPB1-212ENST00000534771 VARS2Q5ST30 1063 aaKnown RBP5.31□□□□□ -1.56
COPB1-212ENST00000534771 HCSTQ9UBK5 93 aa5.31□□□□□ -1.56
COPB1-212ENST00000534771 C3orf67Q6ZVT6 689 aa5.29□□□□□ -1.56
COPB1-212ENST00000534771 HOXB1P14653 301 aaPredicted RBP5.28□□□□□ -1.56
COPB1-212ENST00000534771 TMEM106CQ9BVX2 250 aa5.28□□□□□ -1.56
COPB1-212ENST00000534771 RGS20O76081 388 aa5.27□□□□□ -1.57
COPB1-212ENST00000534771 ZNF687Q8N1G0 1237 aa5.26□□□□□ -1.57
COPB1-212ENST00000534771 ZNF710Q8N1W2 664 aa5.26□□□□□ -1.57
COPB1-212ENST00000534771 HOXB3P14651 431 aaPredicted RBP5.24□□□□□ -1.57
COPB1-212ENST00000534771 PCDHB13Q9Y5F0 798 aa5.23□□□□□ -1.57
COPB1-212ENST00000534771 L3MBTL3Q96JM7 780 aaPredicted RBP5.17□□□□□ -1.58
COPB1-212ENST00000534771 SGIP1Q9BQI5 828 aa5.17□□□□□ -1.58
COPB1-212ENST00000534771 IFNL1Q8IU54 200 aa5.16□□□□□ -1.58
COPB1-212ENST00000534771 LSM11P83369 360 aaKnown RBP eCLIP5.14□□□□□ -1.59
COPB1-212ENST00000534771 TRAF7Q6Q0C0 670 aa5.14□□□□□ -1.59
COPB1-212ENST00000534771 ZNF775Q96BV0 537 aaPredicted RBP5.14□□□□□ -1.59
COPB1-212ENST00000534771 LCE2BO14633 110 aa5.13□□□□□ -1.59
COPB1-212ENST00000534771 DOK7Q18PE1 504 aa5.13□□□□□ -1.59
COPB1-212ENST00000534771 RASEFQ8IZ41 740 aa5.11□□□□□ -1.59
COPB1-212ENST00000534771 ZNF787Q6DD87 383 aa5.1□□□□□ -1.59
COPB1-212ENST00000534771 PDCD7Q8N8D1 485 aaKnown RBP5.1□□□□□ -1.59
COPB1-212ENST00000534771 RIMBP2O15034 1052 aa5.08□□□□□ -1.6
COPB1-212ENST00000534771 A0A0G2JS52 829 aa5.07□□□□□ -1.6
COPB1-212ENST00000534771 ZBTB22O15209 634 aa5.03□□□□□ -1.6
COPB1-212ENST00000534771 IFFO2Q5TF58 517 aa5.02□□□□□ -1.61
COPB1-212ENST00000534771 LAPTM4AQ15012 233 aa5□□□□□ -1.61
COPB1-212ENST00000534771 KCTD12Q96CX2 325 aaKnown RBP5□□□□□ -1.61
COPB1-212ENST00000534771 SLC4A1APQ9BWU0 796 aaKnown RBP5□□□□□ -1.61
COPB1-212ENST00000534771 AXIN2Q9Y2T1 843 aa5□□□□□ -1.61
COPB1-212ENST00000534771 GPR153Q6NV75 609 aa4.99□□□□□ -1.61
COPB1-212ENST00000534771 GFRA3O60609 400 aa4.98□□□□□ -1.61
COPB1-212ENST00000534771 SUZ12Q15022 739 aaKnown RBP4.98□□□□□ -1.61
COPB1-212ENST00000534771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.98□□□□□ -1.61
COPB1-212ENST00000534771 PTPN5P54829 565 aa4.97□□□□□ -1.61
COPB1-212ENST00000534771 MKRN3Q13064 507 aaKnown RBP4.97□□□□□ -1.61
COPB1-212ENST00000534771 DPY19L2Q6NUT2 758 aa4.97□□□□□ -1.61
COPB1-212ENST00000534771 POTEEQ6S8J3 1075 aa4.97□□□□□ -1.61
COPB1-212ENST00000534771 ZSWIM6Q9HCJ5 1215 aa4.97□□□□□ -1.61
COPB1-212ENST00000534771 ZNF316A6NFI3 1004 aaPredicted RBP4.95□□□□□ -1.62
COPB1-212ENST00000534771 G3V3G9 751 aa4.95□□□□□ -1.62
COPB1-212ENST00000534771 ARSIQ5FYB1 569 aa4.95□□□□□ -1.62
COPB1-212ENST00000534771 DCAF8Q5TAQ9 597 aa4.95□□□□□ -1.62
COPB1-212ENST00000534771 GOLGA2Q08379 1002 aa4.94□□□□□ -1.62
COPB1-212ENST00000534771 ADGRD1Q6QNK2 874 aa4.94□□□□□ -1.62
COPB1-212ENST00000534771 PBX2P40425 430 aa4.92□□□□□ -1.62
COPB1-212ENST00000534771 BOLA1Q9Y3E2 137 aa4.92□□□□□ -1.62
COPB1-212ENST00000534771 SPDYE4A6NLX3 237 aa4.9□□□□□ -1.63
COPB1-212ENST00000534771 KHSRPQ92945 711 aaKnown RBP eCLIP4.9□□□□□ -1.633e-8■■■□□ 15.1
COPB1-212ENST00000534771 PCDHB8Q9UN66 801 aa4.9□□□□□ -1.63
COPB1-212ENST00000534771 STK17AQ9UEE5 414 aa4.89□□□□□ -1.63
COPB1-212ENST00000534771 STAC3Q96MF2 364 aa4.88□□□□□ -1.63
COPB1-212ENST00000534771 PLEKHG5O94827 1062 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms