RNA–Protein interactions for RNA: ENST00000534070.5

CHEK1-216, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-216ENST00000534070 HMGXB3Q12766 1538 aa9.71□□□□□ -0.85
CHEK1-216ENST00000534070 NEUROD2Q15784 382 aa9.71□□□□□ -0.86
CHEK1-216ENST00000534070 PDIA4P13667 645 aaKnown RBP9.7□□□□□ -0.86
CHEK1-216ENST00000534070 MAPK8IP2Q13387 824 aaPredicted RBP9.69□□□□□ -0.86
CHEK1-216ENST00000534070 EIF4G1Q04637 1599 aaKnown RBP9.69□□□□□ -0.86
CHEK1-216ENST00000534070 DNAJC5Q9H3Z4 198 aa9.69□□□□□ -0.86
CHEK1-216ENST00000534070 CHGAP10645 457 aaKnown RBP9.67□□□□□ -0.86
CHEK1-216ENST00000534070 ZBTB7CA1YPR0 619 aa9.66□□□□□ -0.86
CHEK1-216ENST00000534070 PIAS4Q8N2W9 510 aaPredicted RBP9.66□□□□□ -0.86
CHEK1-216ENST00000534070 FOXD4L5Q5VV16 416 aaPredicted RBP9.61□□□□□ -0.87
CHEK1-216ENST00000534070 FOXD4L4Q8WXT5 416 aaPredicted RBP9.61□□□□□ -0.87
CHEK1-216ENST00000534070 ZMYND15Q9H091 742 aa9.6□□□□□ -0.87
CHEK1-216ENST00000534070 RAD21O60216 631 aa9.59□□□□□ -0.88
CHEK1-216ENST00000534070 KCTD17Q8N5Z5 321 aa9.59□□□□□ -0.88
CHEK1-216ENST00000534070 RSPH6AQ9H0K4 717 aa9.58□□□□□ -0.88
CHEK1-216ENST00000534070 SMARCA4P51532 1647 aa9.58□□□□□ -0.88
CHEK1-216ENST00000534070 ATXN8OSP0DMR3 200 aa9.57□□□□□ -0.88
CHEK1-216ENST00000534070 APBB1O00213 710 aa9.57□□□□□ -0.88
CHEK1-216ENST00000534070 FAM9AQ8IZU1 332 aaPredicted RBP9.57□□□□□ -0.88
CHEK1-216ENST00000534070 LMOD2Q6P5Q4 547 aa9.56□□□□□ -0.88
CHEK1-216ENST00000534070 RBM25P49756 843 aaKnown RBP9.55□□□□□ -0.88
CHEK1-216ENST00000534070 MTMR7Q9Y216 660 aa9.55□□□□□ -0.88
CHEK1-216ENST00000534070 POLR3GLQ9BT43 218 aa9.54□□□□□ -0.88
CHEK1-216ENST00000534070 SLC24A3Q9HC58 644 aa9.53□□□□□ -0.88
CHEK1-216ENST00000534070 HSP90B1P14625 803 aaKnown RBP9.52□□□□□ -0.88
CHEK1-216ENST00000534070 MYCNP04198 464 aaPredicted RBP9.52□□□□□ -0.89
CHEK1-216ENST00000534070 SCRIBQ14160 1630 aa9.52□□□□□ -0.89
CHEK1-216ENST00000534070 WDR97A6NE52 1622 aa9.5□□□□□ -0.89
CHEK1-216ENST00000534070 TRIM41Q8WV44 630 aa9.49□□□□□ -0.89
CHEK1-216ENST00000534070 AEBP1Q8IUX7 1158 aa9.48□□□□□ -0.89
CHEK1-216ENST00000534070 UBE2Q2Q8WVN8 375 aa9.48□□□□□ -0.89
CHEK1-216ENST00000534070 BAZ1AQ9NRL2 1556 aaPredicted RBP9.47□□□□□ -0.89
CHEK1-216ENST00000534070 SPDYE4A6NLX3 237 aa9.47□□□□□ -0.89
CHEK1-216ENST00000534070 THOC2Q8NI27 1593 aaKnown RBP9.46□□□□□ -0.9
CHEK1-216ENST00000534070 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.45□□□□□ -0.9
CHEK1-216ENST00000534070 CC2D2AQ9P2K1 1620 aa9.45□□□□□ -0.9
CHEK1-216ENST00000534070 GPBP1L1Q9HC44 474 aaPredicted RBP9.44□□□□□ -0.9
CHEK1-216ENST00000534070 RGS22Q8NE09 1264 aa9.42□□□□□ -0.9
CHEK1-216ENST00000534070 CCDC82Q8N4S0 544 aa9.41□□□□□ -0.9
CHEK1-216ENST00000534070 IL27Q8NEV9 243 aa9.41□□□□□ -0.9
CHEK1-216ENST00000534070 USP35Q9P2H5 1018 aa9.41□□□□□ -0.9
CHEK1-216ENST00000534070 BRD2P25440 801 aaKnown RBP9.4□□□□□ -0.9
CHEK1-216ENST00000534070 NKX1-1Q15270 411 aaPredicted RBP9.39□□□□□ -0.91
CHEK1-216ENST00000534070 PDE4CQ08493 712 aa9.39□□□□□ -0.91
CHEK1-216ENST00000534070 DNAJC5BQ9UF47 199 aa9.38□□□□□ -0.91
CHEK1-216ENST00000534070 NCAPD3P42695 1498 aa9.38□□□□□ -0.91
CHEK1-216ENST00000534070 MKRN3Q13064 507 aaKnown RBP9.38□□□□□ -0.91
CHEK1-216ENST00000534070 PUS7Q96PZ0 661 aaKnown RBP9.38□□□□□ -0.91
CHEK1-216ENST00000534070 IRX6P78412 446 aaPredicted RBP9.36□□□□□ -0.91
CHEK1-216ENST00000534070 ZC3H15Q8WU90 426 aaKnown RBP9.35□□□□□ -0.91
CHEK1-216ENST00000534070 HMGB1P09429 215 aaKnown RBP9.33□□□□□ -0.92
CHEK1-216ENST00000534070 KCNV2Q8TDN2 545 aa9.32□□□□□ -0.92
CHEK1-216ENST00000534070 MFAP1P55081 439 aaKnown RBP9.3□□□□□ -0.92
CHEK1-216ENST00000534070 ZNF692Q9BU19 519 aaPredicted RBP9.3□□□□□ -0.92
CHEK1-216ENST00000534070 SPOCK2Q92563 424 aa9.3□□□□□ -0.92
CHEK1-216ENST00000534070 LAMC3Q9Y6N6 1575 aa9.29□□□□□ -0.92
CHEK1-216ENST00000534070 GZF1Q9H116 711 aaPredicted RBP9.28□□□□□ -0.92
CHEK1-216ENST00000534070 BCL11AQ9H165 835 aa9.28□□□□□ -0.92
CHEK1-216ENST00000534070 TMCO4Q5TGY1 634 aa9.27□□□□□ -0.92
CHEK1-216ENST00000534070 FAM177A1Q8N128 213 aaPredicted RBP9.26□□□□□ -0.93
CHEK1-216ENST00000534070 PROM2Q8N271 834 aa9.26□□□□□ -0.93
CHEK1-216ENST00000534070 TOP2AP11388 1531 aaKnown RBP9.26□□□□□ -0.93
CHEK1-216ENST00000534070 GTPBP6O43824 516 aaPredicted RBP9.25□□□□□ -0.93
CHEK1-216ENST00000534070 CWC22Q9HCG8 908 aaKnown RBP9.25□□□□□ -0.93
CHEK1-216ENST00000534070 CLUAP1Q96AJ1 413 aa9.25□□□□□ -0.93
CHEK1-216ENST00000534070 RNF216Q9NWF9 866 aaPredicted RBP9.25□□□□□ -0.93
CHEK1-216ENST00000534070 CIZ1Q9ULV3 898 aaPredicted RBP9.23□□□□□ -0.93
CHEK1-216ENST00000534070 WDR70Q9NW82 654 aa9.22□□□□□ -0.93
CHEK1-216ENST00000534070 BIVM-ERCC5R4GMW8 1640 aa9.22□□□□□ -0.93
CHEK1-216ENST00000534070 BRPF3Q9ULD4 1205 aa9.22□□□□□ -0.93
CHEK1-216ENST00000534070 WDR62O43379 1518 aa9.22□□□□□ -0.93
CHEK1-216ENST00000534070 KIF21AQ7Z4S6 1674 aa9.21□□□□□ -0.94
CHEK1-216ENST00000534070 RNF25Q96BH1 459 aaPredicted RBP9.21□□□□□ -0.94
CHEK1-216ENST00000534070 BCL11BQ9C0K0 894 aaPredicted RBP9.21□□□□□ -0.94
CHEK1-216ENST00000534070 SCAF1Q9H7N4 1312 aaKnown RBP9.21□□□□□ -0.94
CHEK1-216ENST00000534070 MKRN4PQ13434 485 aaPredicted RBP9.21□□□□□ -0.94
CHEK1-216ENST00000534070 PPM1GO15355 546 aaPredicted RBP9.2□□□□□ -0.94
CHEK1-216ENST00000534070 TAF7LQ5H9L4 462 aa9.19□□□□□ -0.94
CHEK1-216ENST00000534070 HS6ST3Q8IZP7 471 aa9.17□□□□□ -0.94
CHEK1-216ENST00000534070 ZFP91Q96JP5 570 aaPredicted RBP9.17□□□□□ -0.94
CHEK1-216ENST00000534070 ATAD2BQ9ULI0 1458 aa9.15□□□□□ -0.94
CHEK1-216ENST00000534070 IRF5Q13568 498 aa9.15□□□□□ -0.95
CHEK1-216ENST00000534070 E9PSI1 815 aa9.14□□□□□ -0.95
CHEK1-216ENST00000534070 RETREG2Q8NC44 543 aa9.14□□□□□ -0.95
CHEK1-216ENST00000534070 SEMA3EO15041 775 aa9.14□□□□□ -0.95
CHEK1-216ENST00000534070 A0A0U1RQG5 324 aaPredicted RBP9.13□□□□□ -0.95
CHEK1-216ENST00000534070 CCDC136Q96JN2 1154 aa9.13□□□□□ -0.95
CHEK1-216ENST00000534070 ZNF526Q8TF50 670 aaPredicted RBP9.13□□□□□ -0.95
CHEK1-216ENST00000534070 ZNF592Q92610 1267 aa9.13□□□□□ -0.95
CHEK1-216ENST00000534070 TMED8Q6PL24 325 aaPredicted RBP9.13□□□□□ -0.95
CHEK1-216ENST00000534070 ZNF777Q9ULD5 760 aaPredicted RBP9.12□□□□□ -0.95
CHEK1-216ENST00000534070 ZNF316A6NFI3 1004 aaPredicted RBP9.11□□□□□ -0.95
CHEK1-216ENST00000534070 WIZO95785 1651 aa9.11□□□□□ -0.95
CHEK1-216ENST00000534070 FBXW7Q969H0 707 aa9.1□□□□□ -0.95
CHEK1-216ENST00000534070 CADPS2Q86UW7 1296 aa9.1□□□□□ -0.95
CHEK1-216ENST00000534070 KDM4CQ9H3R0 1056 aa9.1□□□□□ -0.95
CHEK1-216ENST00000534070 TARBP1Q13395 1621 aaKnown RBP9.1□□□□□ -0.95
CHEK1-216ENST00000534070 MROH2BQ7Z745 1585 aa9.09□□□□□ -0.95
CHEK1-216ENST00000534070 P3H3Q8IVL6 736 aa9.09□□□□□ -0.95
CHEK1-216ENST00000534070 FAM117AQ9C073 453 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms