RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 FHAD1B1AJZ9 1412 aa33.78■■■■□ 3
AP004608.1-202ENST00000533390 ADAMTS12P58397 1594 aa33.77■■■■□ 3
AP004608.1-202ENST00000533390 TTBK1Q5TCY1 1321 aaPredicted RBP33.76■■■□□ 2.99
AP004608.1-202ENST00000533390 EIF4G3O43432 1585 aaKnown RBP33.74■■■□□ 2.99
AP004608.1-202ENST00000533390 EFCAB5A4FU69 1503 aa33.7■■■□□ 2.99
AP004608.1-202ENST00000533390 SNAPC4Q5SXM2 1469 aa33.59■■■□□ 2.97
AP004608.1-202ENST00000533390 HRCP23327 699 aa33.59■■■□□ 2.97
AP004608.1-202ENST00000533390 P3H3Q8IVL6 736 aa33.53■■■□□ 2.96
AP004608.1-202ENST00000533390 MAGI1Q96QZ7 1491 aaPredicted RBP33.52■■■□□ 2.96
AP004608.1-202ENST00000533390 FHOD3Q2V2M9 1422 aa33.51■■■□□ 2.96
AP004608.1-202ENST00000533390 SAMD9Q5K651 1589 aa33.51■■■□□ 2.95
AP004608.1-202ENST00000533390 IQGAP2Q13576 1575 aa33.47■■■□□ 2.95
AP004608.1-202ENST00000533390 GRIN2AQ12879 1464 aa33.43■■■□□ 2.94
AP004608.1-202ENST00000533390 PCF11O94913 1555 aaKnown RBP33.43■■■□□ 2.94
AP004608.1-202ENST00000533390 MAP3K1Q13233 1512 aa33.42■■■□□ 2.94
AP004608.1-202ENST00000533390 FMN1Q68DA7 1419 aa33.41■■■□□ 2.94
AP004608.1-202ENST00000533390 SYNJ2O15056 1496 aa33.39■■■□□ 2.94
AP004608.1-202ENST00000533390 TIAM1Q13009 1591 aa33.39■■■□□ 2.94
AP004608.1-202ENST00000533390 FYCO1Q9BQS8 1478 aa33.37■■■□□ 2.93
AP004608.1-202ENST00000533390 KANK4Q5T7N3 995 aaPredicted RBP33.37■■■□□ 2.93
AP004608.1-202ENST00000533390 CASKIN1Q8WXD9 1431 aa33.34■■■□□ 2.93
AP004608.1-202ENST00000533390 CHMP7Q8WUX9 453 aaPredicted RBP33.33■■■□□ 2.93
AP004608.1-202ENST00000533390 KIAA0586Q9BVV6 1533 aa33.33■■■□□ 2.93
AP004608.1-202ENST00000533390 CFAP43Q8NDM7 1665 aa33.32■■■□□ 2.93
AP004608.1-202ENST00000533390 UGGT2Q9NYU1 1516 aa33.28■■■□□ 2.92
AP004608.1-202ENST00000533390 ATP1B4Q9UN42 357 aaPredicted RBP33.27■■■□□ 2.92
AP004608.1-202ENST00000533390 FBLN2P98095 1184 aa33.23■■■□□ 2.91
AP004608.1-202ENST00000533390 LRRC9Q6ZRR7 1453 aa33.21■■■□□ 2.91
AP004608.1-202ENST00000533390 CEP170Q5SW79 1584 aa33.21■■■□□ 2.91
AP004608.1-202ENST00000533390 NUP160Q12769 1436 aa33.14■■■□□ 2.9
AP004608.1-202ENST00000533390 KIAA0556O60303 1618 aa33.13■■■□□ 2.89
AP004608.1-202ENST00000533390 ZEB1P37275 1124 aaPredicted RBP33.12■■■□□ 2.89
AP004608.1-202ENST00000533390 RRBP1Q9P2E9 1410 aaKnown RBP33.09■■■□□ 2.89
AP004608.1-202ENST00000533390 DISP1Q96F81 1524 aa33.08■■■□□ 2.89
AP004608.1-202ENST00000533390 LRRIQ1Q96JM4 1722 aa33.08■■■□□ 2.89
AP004608.1-202ENST00000533390 HECW1Q76N89 1606 aa33.05■■■□□ 2.88
AP004608.1-202ENST00000533390 HNRNPUL2Q1KMD3 747 aaKnown RBP33.05■■■□□ 2.88
AP004608.1-202ENST00000533390 CHD1O14646 1710 aa33■■■□□ 2.87
AP004608.1-202ENST00000533390 CCDC18Q5T9S5 1454 aa33■■■□□ 2.87
AP004608.1-202ENST00000533390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.99■■■□□ 2.87
AP004608.1-202ENST00000533390 CCNB3Q8WWL7 1395 aa32.98■■■□□ 2.87
AP004608.1-202ENST00000533390 CCER1Q8TC90 406 aaPredicted RBP32.95■■■□□ 2.87
AP004608.1-202ENST00000533390 MTUS2Q5JR59 1369 aa32.95■■■□□ 2.86
AP004608.1-202ENST00000533390 CARMIL2Q6F5E8 1435 aa32.94■■■□□ 2.86
AP004608.1-202ENST00000533390 JPH4Q96JJ6 628 aa32.93■■■□□ 2.86
AP004608.1-202ENST00000533390 PHLDB1Q86UU1 1377 aa32.9■■■□□ 2.86
AP004608.1-202ENST00000533390 EHBP1L1Q8N3D4 1523 aa32.88■■■□□ 2.85
AP004608.1-202ENST00000533390 EPRSP07814 1512 aaKnown RBP32.88■■■□□ 2.85
AP004608.1-202ENST00000533390 RAPGEF6Q8TEU7 1601 aa32.86■■■□□ 2.85
AP004608.1-202ENST00000533390 SUPT6HQ7KZ85 1726 aaKnown RBP32.85■■■□□ 2.85
AP004608.1-202ENST00000533390 CDK13Q14004 1512 aaKnown RBP32.78■■■□□ 2.84
AP004608.1-202ENST00000533390 MAGI3Q5TCQ9 1506 aa32.75■■■□□ 2.83
AP004608.1-202ENST00000533390 NCOA2Q15596 1464 aa32.75■■■□□ 2.83
AP004608.1-202ENST00000533390 NUP153P49790 1475 aaKnown RBP32.73■■■□□ 2.83
AP004608.1-202ENST00000533390 PRG4Q92954 1404 aaPredicted RBP32.7■■■□□ 2.83
AP004608.1-202ENST00000533390 FAM50AQ14320 339 aaKnown RBP32.69■■■□□ 2.82
AP004608.1-202ENST00000533390 FGD6Q6ZV73 1430 aa32.68■■■□□ 2.82
AP004608.1-202ENST00000533390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.67■■■□□ 2.82
AP004608.1-202ENST00000533390 ITGAEP38570 1179 aa32.67■■■□□ 2.82
AP004608.1-202ENST00000533390 SHROOM2Q13796 1616 aa32.67■■■□□ 2.82
AP004608.1-202ENST00000533390 PLB1Q6P1J6 1458 aa32.67■■■□□ 2.82
AP004608.1-202ENST00000533390 ARID3CA6NKF2 412 aa32.67■■■□□ 2.82
AP004608.1-202ENST00000533390 ARHGEF11O15085 1522 aa32.66■■■□□ 2.82
AP004608.1-202ENST00000533390 MYOM3Q5VTT5 1437 aa32.65■■■□□ 2.82
AP004608.1-202ENST00000533390 CDK11AQ9UQ88 783 aaPredicted RBP32.61■■■□□ 2.81
AP004608.1-202ENST00000533390 ABCA8O94911 1581 aa32.6■■■□□ 2.81
AP004608.1-202ENST00000533390 PTPRGP23470 1445 aa32.54■■■□□ 2.8
AP004608.1-202ENST00000533390 CLASP1Q7Z460 1538 aa32.54■■■□□ 2.8
AP004608.1-202ENST00000533390 PTPN23Q9H3S7 1636 aa32.51■■■□□ 2.8
AP004608.1-202ENST00000533390 TROQ12816 1431 aaPredicted RBP32.47■■■□□ 2.79
AP004608.1-202ENST00000533390 MIA2Q96PC5 1412 aa32.44■■■□□ 2.78
AP004608.1-202ENST00000533390 SETD5Q9C0A6 1442 aa32.43■■■□□ 2.78
AP004608.1-202ENST00000533390 TCOF1Q13428 1488 aaKnown RBP32.42■■■□□ 2.78
AP004608.1-202ENST00000533390 ADCY10Q96PN6 1610 aa32.41■■■□□ 2.78
AP004608.1-202ENST00000533390 RAB3GAP2Q9H2M9 1393 aa32.4■■■□□ 2.78
AP004608.1-202ENST00000533390 ERCC6L2Q5T890 1561 aa32.4■■■□□ 2.78
AP004608.1-202ENST00000533390 ATP10BO94823 1461 aa32.39■■■□□ 2.78
AP004608.1-202ENST00000533390 DHX57Q6P158 1386 aaKnown RBP32.39■■■□□ 2.78
AP004608.1-202ENST00000533390 UACAQ9BZF9 1416 aa32.36■■■□□ 2.77
AP004608.1-202ENST00000533390 CLSPNQ9HAW4 1339 aa32.36■■■□□ 2.77
AP004608.1-202ENST00000533390 PLEKHD1A6NEE1 506 aa32.33■■■□□ 2.77
AP004608.1-202ENST00000533390 ITSN2Q9NZM3 1697 aa32.33■■■□□ 2.77
AP004608.1-202ENST00000533390 KIF14Q15058 1648 aa32.31■■■□□ 2.76
AP004608.1-202ENST00000533390 PTPRKQ15262 1439 aa32.27■■■□□ 2.76
AP004608.1-202ENST00000533390 ABCC2Q92887 1545 aa32.26■■■□□ 2.76
AP004608.1-202ENST00000533390 HFM1A2PYH4 1435 aa32.22■■■□□ 2.75
AP004608.1-202ENST00000533390 GPATCH8Q9UKJ3 1502 aaKnown RBP32.18■■■□□ 2.74
AP004608.1-202ENST00000533390 CFDP1Q9UEE9 299 aaPredicted RBP32.16■■■□□ 2.74
AP004608.1-202ENST00000533390 CDC42BPAQ5VT25 1732 aa32.15■■■□□ 2.74
AP004608.1-202ENST00000533390 DNMT1P26358 1616 aaKnown RBP32.15■■■□□ 2.74
AP004608.1-202ENST00000533390 ABCC10Q5T3U5 1492 aa32.14■■■□□ 2.74
AP004608.1-202ENST00000533390 UHRF1BP1LA0JNW5 1464 aa32.13■■■□□ 2.73
AP004608.1-202ENST00000533390 NAIPQ13075 1403 aa32.12■■■□□ 2.73
AP004608.1-202ENST00000533390 OSCARQ8IYS5 282 aa32.12■■■□□ 2.73
AP004608.1-202ENST00000533390 GCC2Q8IWJ2 1684 aa32.11■■■□□ 2.73
AP004608.1-202ENST00000533390 AKNAQ7Z591 1439 aa32.11■■■□□ 2.73
AP004608.1-202ENST00000533390 CAMSAP2Q08AD1 1489 aa32.11■■■□□ 2.73
AP004608.1-202ENST00000533390 DAPK1P53355 1430 aa32.1■■■□□ 2.73
AP004608.1-202ENST00000533390 ZNF644Q9H582 1327 aaPredicted RBP32.08■■■□□ 2.73
AP004608.1-202ENST00000533390 CHIC2Q9UKJ5 165 aa32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms