RNA–Protein interactions for RNA: ENST00000533302.5

TRIM29-220, Transcript of tripartite motif containing 29, humanhuman

TSL 4

Gene TRIM29, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-220ENST00000533302 CLEC11AQ9Y240 323 aa10.36□□□□□ -0.75
TRIM29-220ENST00000533302 NPM1P06748 294 aaKnown RBP eCLIP10.35□□□□□ -0.75
TRIM29-220ENST00000533302 CREBZFQ9NS37 354 aa10.32□□□□□ -0.76
TRIM29-220ENST00000533302 PRR29P0C7W0 189 aa10.31□□□□□ -0.76
TRIM29-220ENST00000533302 NUBP1P53384 320 aa10.3□□□□□ -0.76
TRIM29-220ENST00000533302 HAP1P54257 671 aaPredicted RBP10.3□□□□□ -0.76
TRIM29-220ENST00000533302 BBXQ8WY36 941 aaPredicted RBP10.28□□□□□ -0.76
TRIM29-220ENST00000533302 MNX1P50219 401 aaPredicted RBP10.27□□□□□ -0.77
TRIM29-220ENST00000533302 PITPNM1O00562 1244 aa10.25□□□□□ -0.77
TRIM29-220ENST00000533302 TRIM41Q8WV44 630 aa10.25□□□□□ -0.77
TRIM29-220ENST00000533302 GSE1Q14687 1217 aa10.24□□□□□ -0.77
TRIM29-220ENST00000533302 CUX2O14529 1486 aa10.23□□□□□ -0.77
TRIM29-220ENST00000533302 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.23□□□□□ -0.77
TRIM29-220ENST00000533302 RNF25Q96BH1 459 aaPredicted RBP10.22□□□□□ -0.77
TRIM29-220ENST00000533302 DCAF8Q5TAQ9 597 aa10.21□□□□□ -0.77
TRIM29-220ENST00000533302 CHGAP10645 457 aaKnown RBP10.2□□□□□ -0.78
TRIM29-220ENST00000533302 PAXIP1Q6ZW49 1069 aaPredicted RBP10.2□□□□□ -0.78
TRIM29-220ENST00000533302 ERCC6Q03468 1493 aa10.19□□□□□ -0.78
TRIM29-220ENST00000533302 NCAPD3P42695 1498 aa10.18□□□□□ -0.78
TRIM29-220ENST00000533302 RASEFQ8IZ41 740 aa10.17□□□□□ -0.78
TRIM29-220ENST00000533302 CFAP44Q96MT7 982 aa10.17□□□□□ -0.78
TRIM29-220ENST00000533302 FAM212AQ96EL1 285 aa10.16□□□□□ -0.78
TRIM29-220ENST00000533302 HS6ST3Q8IZP7 471 aa10.13□□□□□ -0.79
TRIM29-220ENST00000533302 VSIG10Q8N0Z9 540 aa10.13□□□□□ -0.79
TRIM29-220ENST00000533302 SPRYD3Q8NCJ5 442 aa10.12□□□□□ -0.79
TRIM29-220ENST00000533302 RIOK3O14730 519 aaKnown RBP10.1□□□□□ -0.79
TRIM29-220ENST00000533302 CHADLQ6NUI6 762 aa10.1□□□□□ -0.79
TRIM29-220ENST00000533302 KDM2AQ9Y2K7 1162 aa10.09□□□□□ -0.79
TRIM29-220ENST00000533302 ATAD2BQ9ULI0 1458 aa10.09□□□□□ -0.79
TRIM29-220ENST00000533302 CHRM1P11229 460 aaPredicted RBP10.08□□□□□ -0.8
TRIM29-220ENST00000533302 TSHZ2Q9NRE2 1034 aa10.06□□□□□ -0.8
TRIM29-220ENST00000533302 PYGBP11216 843 aa10.05□□□□□ -0.8
TRIM29-220ENST00000533302 VGFO15240 615 aaPredicted RBP10.03□□□□□ -0.8
TRIM29-220ENST00000533302 NKX1-1Q15270 411 aaPredicted RBP10.03□□□□□ -0.8
TRIM29-220ENST00000533302 TAOK2Q9UL54 1235 aa10.03□□□□□ -0.8
TRIM29-220ENST00000533302 FARP1Q9Y4F1 1045 aaPredicted RBP10.02□□□□□ -0.81
TRIM29-220ENST00000533302 NESP48681 1621 aa10.02□□□□□ -0.81
TRIM29-220ENST00000533302 STK25O00506 426 aa10□□□□□ -0.81
TRIM29-220ENST00000533302 TSPYL2Q9H2G4 693 aaPredicted RBP9.99□□□□□ -0.81
TRIM29-220ENST00000533302 SMARCA2P51531 1590 aa9.98□□□□□ -0.81
TRIM29-220ENST00000533302 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.98□□□□□ -0.81
TRIM29-220ENST00000533302 PRKAR2AP13861 404 aaKnown RBP9.98□□□□□ -0.81
TRIM29-220ENST00000533302 ZFP91Q96JP5 570 aaPredicted RBP9.98□□□□□ -0.81
TRIM29-220ENST00000533302 SGIP1Q9BQI5 828 aa9.98□□□□□ -0.81
TRIM29-220ENST00000533302 FXR2P51116 673 aaKnown RBP eCLIP9.97□□□□□ -0.81
TRIM29-220ENST00000533302 HMGXB3Q12766 1538 aa9.97□□□□□ -0.81
TRIM29-220ENST00000533302 BCANQ96GW7 911 aa9.96□□□□□ -0.82
TRIM29-220ENST00000533302 GTPBP6O43824 516 aaPredicted RBP9.95□□□□□ -0.82
TRIM29-220ENST00000533302 BCL11BQ9C0K0 894 aaPredicted RBP9.95□□□□□ -0.82
TRIM29-220ENST00000533302 PDS5BQ9NTI5 1447 aa9.95□□□□□ -0.82
TRIM29-220ENST00000533302 BAZ1BQ9UIG0 1483 aaKnown RBP9.94□□□□□ -0.82
TRIM29-220ENST00000533302 STK24Q9Y6E0 443 aa9.94□□□□□ -0.82
TRIM29-220ENST00000533302 CHRDL2Q6WN34 429 aa9.9□□□□□ -0.82
TRIM29-220ENST00000533302 CCDC61Q9Y6R9 512 aa9.9□□□□□ -0.82
TRIM29-220ENST00000533302 SMARCA4P51532 1647 aa9.89□□□□□ -0.83
TRIM29-220ENST00000533302 CADPSQ9ULU8 1353 aa9.88□□□□□ -0.83
TRIM29-220ENST00000533302 ZNF467Q7Z7K2 595 aaPredicted RBP9.88□□□□□ -0.83
TRIM29-220ENST00000533302 PIP4P2Q8N4L2 257 aa9.88□□□□□ -0.83
TRIM29-220ENST00000533302 BAZ1AQ9NRL2 1556 aaPredicted RBP9.86□□□□□ -0.83
TRIM29-220ENST00000533302 PCDHB8Q9UN66 801 aa9.86□□□□□ -0.83
TRIM29-220ENST00000533302 PCDHB13Q9Y5F0 798 aa9.86□□□□□ -0.83
TRIM29-220ENST00000533302 LAMC3Q9Y6N6 1575 aa9.86□□□□□ -0.83
TRIM29-220ENST00000533302 THOC2Q8NI27 1593 aaKnown RBP9.85□□□□□ -0.83
TRIM29-220ENST00000533302 PDAP1Q13442 181 aaKnown RBP9.83□□□□□ -0.84
TRIM29-220ENST00000533302 PEG3Q9GZU2 1588 aa9.83□□□□□ -0.84
TRIM29-220ENST00000533302 MRC2Q9UBG0 1479 aa9.81□□□□□ -0.84
TRIM29-220ENST00000533302 ZNF579Q8NAF0 562 aaKnown RBP9.81□□□□□ -0.84
TRIM29-220ENST00000533302 MROH2BQ7Z745 1585 aa9.8□□□□□ -0.84
TRIM29-220ENST00000533302 PAK3O75914 559 aaPredicted RBP9.79□□□□□ -0.84
TRIM29-220ENST00000533302 PSEN1P49768 467 aa9.79□□□□□ -0.84
TRIM29-220ENST00000533302 RYDENQ9NUL5 291 aaKnown RBP9.79□□□□□ -0.84
TRIM29-220ENST00000533302 MAP3K13O43283 966 aa9.78□□□□□ -0.84
TRIM29-220ENST00000533302 PRKCSHP14314 528 aaPredicted RBP9.78□□□□□ -0.84
TRIM29-220ENST00000533302 IFNL1Q8IU54 200 aa9.78□□□□□ -0.84
TRIM29-220ENST00000533302 KIF12Q96FN5 646 aa9.77□□□□□ -0.85
TRIM29-220ENST00000533302 WDR62O43379 1518 aa9.75□□□□□ -0.85
TRIM29-220ENST00000533302 MFRPQ9BY79 579 aa9.73□□□□□ -0.85
TRIM29-220ENST00000533302 ZRANB1Q9UGI0 708 aa9.73□□□□□ -0.85
TRIM29-220ENST00000533302 CD44P16070 742 aaKnown RBP9.72□□□□□ -0.85
TRIM29-220ENST00000533302 CEP164Q9UPV0 1460 aa9.72□□□□□ -0.85
TRIM29-220ENST00000533302 FANCD2Q9BXW9 1451 aa9.71□□□□□ -0.86
TRIM29-220ENST00000533302 PHF12Q96QT6 1004 aa9.7□□□□□ -0.86
TRIM29-220ENST00000533302 KIF21AQ7Z4S6 1674 aa9.69□□□□□ -0.86
TRIM29-220ENST00000533302 CFTRP13569 1480 aa9.68□□□□□ -0.86
TRIM29-220ENST00000533302 NBR1Q14596 966 aa9.68□□□□□ -0.86
TRIM29-220ENST00000533302 TPRNQ4KMQ1 711 aa9.68□□□□□ -0.86
TRIM29-220ENST00000533302 CADPS2Q86UW7 1296 aa9.68□□□□□ -0.86
TRIM29-220ENST00000533302 EFCAB3Q8N7B9 438 aa9.68□□□□□ -0.86
TRIM29-220ENST00000533302 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
TRIM29-220ENST00000533302 CYB5RLQ6IPT4 315 aa9.65□□□□□ -0.86
TRIM29-220ENST00000533302 FBXO22Q8NEZ5 403 aa9.65□□□□□ -0.86
TRIM29-220ENST00000533302 PPP1R37O75864 691 aa9.64□□□□□ -0.87
TRIM29-220ENST00000533302 PHF8Q9UPP1 1060 aa9.63□□□□□ -0.87
TRIM29-220ENST00000533302 SOX12O15370 315 aa9.62□□□□□ -0.87
TRIM29-220ENST00000533302 URB2Q14146 1524 aaKnown RBP9.61□□□□□ -0.87
TRIM29-220ENST00000533302 C19orf67A6NJJ6 358 aa9.61□□□□□ -0.87
TRIM29-220ENST00000533302 NLRP6P59044 892 aa9.61□□□□□ -0.87
TRIM29-220ENST00000533302 TRPC6Q9Y210 931 aa9.61□□□□□ -0.87
TRIM29-220ENST00000533302 MS4A3Q96HJ5 214 aa9.59□□□□□ -0.87
TRIM29-220ENST00000533302 RSF1Q96T23 1441 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms