RNA–Protein interactions for RNA: ENST00000532276.1

TTC9C-204, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 2

Gene TTC9C, Length 627 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-204ENST00000532276 ATMINO43313 823 aaPredicted RBP13.98□□□□□ -0.17
TTC9C-204ENST00000532276 MAMSTRQ6ZN01 415 aa13.97□□□□□ -0.17
TTC9C-204ENST00000532276 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
TTC9C-204ENST00000532276 MNX1P50219 401 aaPredicted RBP13.95□□□□□ -0.18
TTC9C-204ENST00000532276 MS4A3Q96HJ5 214 aa13.94□□□□□ -0.18
TTC9C-204ENST00000532276 FAM163AQ96GL9 167 aaPredicted RBP13.92□□□□□ -0.18
TTC9C-204ENST00000532276 SCUBE2Q9NQ36 999 aa13.83□□□□□ -0.2
TTC9C-204ENST00000532276 ATN1P54259 1190 aaPredicted RBP13.79□□□□□ -0.2
TTC9C-204ENST00000532276 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
TTC9C-204ENST00000532276 POTEFA5A3E0 1075 aa13.76□□□□□ -0.21
TTC9C-204ENST00000532276 CDAN1Q8IWY9 1227 aa13.68□□□□□ -0.22
TTC9C-204ENST00000532276 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
TTC9C-204ENST00000532276 TSPYL2Q9H2G4 693 aaPredicted RBP13.67□□□□□ -0.22
TTC9C-204ENST00000532276 BMP2KQ9NSY1 1161 aaPredicted RBP13.66□□□□□ -0.22
TTC9C-204ENST00000532276 KIF12Q96FN5 646 aa13.65□□□□□ -0.22
TTC9C-204ENST00000532276 TRPC6Q9Y210 931 aa13.62□□□□□ -0.23
TTC9C-204ENST00000532276 COLQQ9Y215 455 aaPredicted RBP13.57□□□□□ -0.24
TTC9C-204ENST00000532276 TIE1P35590 1138 aa13.56□□□□□ -0.24
TTC9C-204ENST00000532276 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
TTC9C-204ENST00000532276 MAP3K13O43283 966 aa13.52□□□□□ -0.25
TTC9C-204ENST00000532276 SEC24BO95487 1268 aa13.5□□□□□ -0.25
TTC9C-204ENST00000532276 TTLL13PA6NNM8 815 aa13.47□□□□□ -0.25
TTC9C-204ENST00000532276 ST18O60284 1047 aa13.47□□□□□ -0.25
TTC9C-204ENST00000532276 IER5LQ5T953 404 aa13.42□□□□□ -0.26
TTC9C-204ENST00000532276 MMRN1Q13201 1228 aa13.41□□□□□ -0.26
TTC9C-204ENST00000532276 SLAIN1Q8ND83 568 aa13.4□□□□□ -0.26
TTC9C-204ENST00000532276 PROM2Q8N271 834 aa13.38□□□□□ -0.27
TTC9C-204ENST00000532276 TRIM35Q9UPQ4 493 aa13.38□□□□□ -0.27
TTC9C-204ENST00000532276 SPNS2Q8IVW8 549 aa13.37□□□□□ -0.27
TTC9C-204ENST00000532276 RASEFQ8IZ41 740 aa13.37□□□□□ -0.27
TTC9C-204ENST00000532276 SGIP1Q9BQI5 828 aa13.31□□□□□ -0.28
TTC9C-204ENST00000532276 TMEM121BQ9BXQ6 578 aaPredicted RBP13.25□□□□□ -0.29
TTC9C-204ENST00000532276 PCDHB13Q9Y5F0 798 aa13.25□□□□□ -0.29
TTC9C-204ENST00000532276 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
TTC9C-204ENST00000532276 MIER1Q8N108 512 aa13.22□□□□□ -0.29
TTC9C-204ENST00000532276 PLCG2P16885 1265 aa13.2□□□□□ -0.3
TTC9C-204ENST00000532276 IRX5P78411 483 aaPredicted RBP13.19□□□□□ -0.3
TTC9C-204ENST00000532276 IFNL1Q8IU54 200 aa13.18□□□□□ -0.3
TTC9C-204ENST00000532276 TMEM106CQ9BVX2 250 aa13.17□□□□□ -0.3
TTC9C-204ENST00000532276 SNPHO15079 494 aa13.15□□□□□ -0.3
TTC9C-204ENST00000532276 MARVELD3Q96A59 401 aa13.14□□□□□ -0.31
TTC9C-204ENST00000532276 NUBP1P53384 320 aa13.09□□□□□ -0.31
TTC9C-204ENST00000532276 OCEL1Q9H607 264 aa13.09□□□□□ -0.31
TTC9C-204ENST00000532276 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.07□□□□□ -0.32
TTC9C-204ENST00000532276 PLCD3Q8N3E9 789 aa13.01□□□□□ -0.33
TTC9C-204ENST00000532276 KRTAP3-3Q9BYR6 98 aa13.01□□□□□ -0.33
TTC9C-204ENST00000532276 KRTAP3-2Q9BYR7 98 aa13.01□□□□□ -0.33
TTC9C-204ENST00000532276 POTEB3A0JP26 581 aa12.97□□□□□ -0.33
TTC9C-204ENST00000532276 POTEBQ6S5H4 581 aa12.97□□□□□ -0.33
TTC9C-204ENST00000532276 EMP3P54852 163 aa12.96□□□□□ -0.33
TTC9C-204ENST00000532276 ZBTB47Q9UFB7 747 aaPredicted RBP12.96□□□□□ -0.33
TTC9C-204ENST00000532276 FAM212AQ96EL1 285 aa12.94□□□□□ -0.34
TTC9C-204ENST00000532276 HS3ST6Q96QI5 342 aa12.93□□□□□ -0.34
TTC9C-204ENST00000532276 EHMT2Q96KQ7 1210 aa12.9□□□□□ -0.34
TTC9C-204ENST00000532276 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
TTC9C-204ENST00000532276 PDCD7Q8N8D1 485 aaKnown RBP12.86□□□□□ -0.35
TTC9C-204ENST00000532276 C3orf67Q6ZVT6 689 aa12.83□□□□□ -0.36
TTC9C-204ENST00000532276 PCDHB8Q9UN66 801 aa12.82□□□□□ -0.36
TTC9C-204ENST00000532276 PYGBP11216 843 aa12.81□□□□□ -0.36
TTC9C-204ENST00000532276 L3MBTL3Q96JM7 780 aaPredicted RBP12.81□□□□□ -0.36
TTC9C-204ENST00000532276 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
TTC9C-204ENST00000532276 MKRN3Q13064 507 aaKnown RBP12.7□□□□□ -0.38
TTC9C-204ENST00000532276 HOXB3P14651 431 aaPredicted RBP12.67□□□□□ -0.38
TTC9C-204ENST00000532276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.67□□□□□ -0.38
TTC9C-204ENST00000532276 RNF166Q96A37 237 aaPredicted RBP12.66□□□□□ -0.38
TTC9C-204ENST00000532276 GOLGA2Q08379 1002 aa12.65□□□□□ -0.38
TTC9C-204ENST00000532276 ILDR1Q86SU0 546 aaPredicted RBP12.63□□□□□ -0.39
TTC9C-204ENST00000532276 HOXB1P14653 301 aaPredicted RBP12.62□□□□□ -0.39
TTC9C-204ENST00000532276 ZNF467Q7Z7K2 595 aaPredicted RBP12.61□□□□□ -0.39
TTC9C-204ENST00000532276 DPY19L2Q6NUT2 758 aa12.58□□□□□ -0.4
TTC9C-204ENST00000532276 ERBB3P21860 1342 aa12.57□□□□□ -0.4
TTC9C-204ENST00000532276 MYT1LQ9UL68 1186 aa12.55□□□□□ -0.4
TTC9C-204ENST00000532276 PSEN1P49768 467 aa12.54□□□□□ -0.4
TTC9C-204ENST00000532276 ZNF710Q8N1W2 664 aa12.54□□□□□ -0.4
TTC9C-204ENST00000532276 CHRM1P11229 460 aaPredicted RBP12.51□□□□□ -0.41
TTC9C-204ENST00000532276 BOLA1Q9Y3E2 137 aa12.51□□□□□ -0.41
TTC9C-204ENST00000532276 DOK7Q18PE1 504 aa12.49□□□□□ -0.41
TTC9C-204ENST00000532276 GSE1Q14687 1217 aa12.48□□□□□ -0.41
TTC9C-204ENST00000532276 VARS2Q5ST30 1063 aaKnown RBP12.47□□□□□ -0.41
TTC9C-204ENST00000532276 G3V3G9 751 aa12.45□□□□□ -0.42
TTC9C-204ENST00000532276 ZNF687Q8N1G0 1237 aa12.44□□□□□ -0.42
TTC9C-204ENST00000532276 PDAP1Q13442 181 aaKnown RBP12.4□□□□□ -0.42
TTC9C-204ENST00000532276 RIMBP2O15034 1052 aa12.39□□□□□ -0.43
TTC9C-204ENST00000532276 PTGER2P43116 358 aa12.39□□□□□ -0.43
TTC9C-204ENST00000532276 CABP2Q9NPB3 220 aa12.37□□□□□ -0.43
TTC9C-204ENST00000532276 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
TTC9C-204ENST00000532276 GPR153Q6NV75 609 aa12.32□□□□□ -0.44
TTC9C-204ENST00000532276 FKBP8Q14318 412 aa12.3□□□□□ -0.44
TTC9C-204ENST00000532276 KLHL34Q8N239 644 aa12.29□□□□□ -0.44
TTC9C-204ENST00000532276 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
TTC9C-204ENST00000532276 TMEM92Q6UXU6 159 aa12.27□□□□□ -0.45
TTC9C-204ENST00000532276 ANKRD13DQ6ZTN6 518 aa12.26□□□□□ -0.45
TTC9C-204ENST00000532276 LSM11P83369 360 aaKnown RBP eCLIP12.18□□□□□ -0.46
TTC9C-204ENST00000532276 MICALL2Q8IY33 904 aa12.18□□□□□ -0.46
TTC9C-204ENST00000532276 PLA2G2EQ9NZK7 142 aa12.18□□□□□ -0.46
TTC9C-204ENST00000532276 VASPP50552 380 aaPredicted RBP12.17□□□□□ -0.46
TTC9C-204ENST00000532276 ARSIQ5FYB1 569 aa12.17□□□□□ -0.46
TTC9C-204ENST00000532276 EFCAB3Q8N7B9 438 aa12.16□□□□□ -0.46
TTC9C-204ENST00000532276 ZNF316A6NFI3 1004 aaPredicted RBP12.15□□□□□ -0.46
TTC9C-204ENST00000532276 KHSRPQ92945 711 aaKnown RBP eCLIP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms