RNA–Protein interactions for RNA: ENST00000531920.6

MED17-208, Transcript of mediator complex subunit 17, human

TSL 3

Gene MED17, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-208	ENST00000531920	METRN	Q9UJH8	293 aa		11.41	□□□□□ -0.58
MED17-208	ENST00000531920	ATMIN	O43313	823 aa	Predicted RBP	11.4	□□□□□ -0.58
MED17-208	ENST00000531920	C7	P10643	843 aa		11.4	□□□□□ -0.58
MED17-208	ENST00000531920	SLC39A7	Q92504	469 aa		11.38	□□□□□ -0.59
MED17-208	ENST00000531920	MAMSTR	Q6ZN01	415 aa		11.35	□□□□□ -0.59
MED17-208	ENST00000531920	MS4A3	Q96HJ5	214 aa		11.35	□□□□□ -0.59
MED17-208	ENST00000531920	NPM1	P06748	294 aa	Known RBP eCLIP	11.34	□□□□□ -0.59
MED17-208	ENST00000531920	FAM163A	Q96GL9	167 aa	Predicted RBP	11.3	□□□□□ -0.6
MED17-208	ENST00000531920	POTEF	A5A3E0	1075 aa		11.26	□□□□□ -0.61
MED17-208	ENST00000531920	ATN1	P54259	1190 aa	Predicted RBP	11.25	□□□□□ -0.61
MED17-208	ENST00000531920	SPDYE4	A6NLX3	237 aa		11.24	□□□□□ -0.61
MED17-208	ENST00000531920	SCUBE2	Q9NQ36	999 aa		11.22	□□□□□ -0.61
MED17-208	ENST00000531920	CCDC61	Q9Y6R9	512 aa		11.18	□□□□□ -0.62
MED17-208	ENST00000531920	KIF12	Q96FN5	646 aa		11.16	□□□□□ -0.62
MED17-208	ENST00000531920	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.14	□□□□□ -0.63
MED17-208	ENST00000531920	RTN4	Q9NQC3	1192 aa	Known RBP	11.13	□□□□□ -0.63
MED17-208	ENST00000531920	TRPC6	Q9Y210	931 aa		11.13	□□□□□ -0.63
MED17-208	ENST00000531920	CDAN1	Q8IWY9	1227 aa		11.12	□□□□□ -0.63
MED17-208	ENST00000531920	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.12	□□□□□ -0.63
MED17-208	ENST00000531920	TIE1	P35590	1138 aa		11.07	□□□□□ -0.64
MED17-208	ENST00000531920	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.07	□□□□□ -0.64
MED17-208	ENST00000531920	COLQ	Q9Y215	455 aa	Predicted RBP	11.07	□□□□□ -0.64
MED17-208	ENST00000531920	SLC24A1	O60721	1099 aa		11.03	□□□□□ -0.64
MED17-208	ENST00000531920	FKBP8	Q14318	412 aa		11.03	□□□□□ -0.64
MED17-208	ENST00000531920	MAP3K13	O43283	966 aa		11.02	□□□□□ -0.65
MED17-208	ENST00000531920	TTLL13P	A6NNM8	815 aa		10.99	□□□□□ -0.65
MED17-208	ENST00000531920	PROM2	Q8N271	834 aa		10.99	□□□□□ -0.65
MED17-208	ENST00000531920	ST18	O60284	1047 aa		10.97	□□□□□ -0.65
MED17-208	ENST00000531920	SEC24B	O95487	1268 aa		10.95	□□□□□ -0.66
MED17-208	ENST00000531920	IER5L	Q5T953	404 aa		10.94	□□□□□ -0.66
MED17-208	ENST00000531920	RASEF	Q8IZ41	740 aa		10.92	□□□□□ -0.66
MED17-208	ENST00000531920	MMRN1	Q13201	1228 aa		10.91	□□□□□ -0.66
MED17-208	ENST00000531920	TRIM35	Q9UPQ4	493 aa		10.9	□□□□□ -0.66
MED17-208	ENST00000531920	SPNS2	Q8IVW8	549 aa		10.89	□□□□□ -0.67
MED17-208	ENST00000531920	SLAIN1	Q8ND83	568 aa		10.89	□□□□□ -0.67
MED17-208	ENST00000531920	SGIP1	Q9BQI5	828 aa		10.88	□□□□□ -0.67
MED17-208	ENST00000531920	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.79	□□□□□ -0.68
MED17-208	ENST00000531920	PCDHB13	Q9Y5F0	798 aa		10.79	□□□□□ -0.68
MED17-208	ENST00000531920	IRX5	P78411	483 aa	Predicted RBP	10.78	□□□□□ -0.68
MED17-208	ENST00000531920	MIER1	Q8N108	512 aa		10.78	□□□□□ -0.68
MED17-208	ENST00000531920	IFNL1	Q8IU54	200 aa		10.76	□□□□□ -0.69
MED17-208	ENST00000531920	PLEKHG5	O94827	1062 aa		10.72	□□□□□ -0.69
MED17-208	ENST00000531920	PLCG2	P16885	1265 aa		10.72	□□□□□ -0.69
MED17-208	ENST00000531920	NUBP1	P53384	320 aa		10.72	□□□□□ -0.69
MED17-208	ENST00000531920	TMEM106C	Q9BVX2	250 aa		10.72	□□□□□ -0.69
MED17-208	ENST00000531920	SNPH	O15079	494 aa		10.68	□□□□□ -0.7
MED17-208	ENST00000531920	MARVELD3	Q96A59	401 aa		10.67	□□□□□ -0.7
MED17-208	ENST00000531920	OCEL1	Q9H607	264 aa		10.67	□□□□□ -0.7
MED17-208	ENST00000531920	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.62	□□□□□ -0.71
MED17-208	ENST00000531920	POTEB3	A0JP26	581 aa		10.61	□□□□□ -0.71
MED17-208	ENST00000531920	POTEB	Q6S5H4	581 aa		10.61	□□□□□ -0.71
MED17-208	ENST00000531920	KRTAP3-3	Q9BYR6	98 aa		10.61	□□□□□ -0.71
MED17-208	ENST00000531920	KRTAP3-2	Q9BYR7	98 aa		10.61	□□□□□ -0.71
MED17-208	ENST00000531920	PLCD3	Q8N3E9	789 aa		10.57	□□□□□ -0.72
MED17-208	ENST00000531920	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.55	□□□□□ -0.72
MED17-208	ENST00000531920	FAM212A	Q96EL1	285 aa		10.53	□□□□□ -0.72
MED17-208	ENST00000531920	PDCD7	Q8N8D1	485 aa	Known RBP	10.52	□□□□□ -0.73
MED17-208	ENST00000531920	HS3ST6	Q96QI5	342 aa		10.52	□□□□□ -0.73
MED17-208	ENST00000531920	EMP3	P54852	163 aa		10.51	□□□□□ -0.73
MED17-208	ENST00000531920	FAM205C	A6NFA0	338 aa		10.46	□□□□□ -0.73
MED17-208	ENST00000531920	PCDHB8	Q9UN66	801 aa		10.46	□□□□□ -0.73
MED17-208	ENST00000531920	PYGB	P11216	843 aa		10.44	□□□□□ -0.74
MED17-208	ENST00000531920	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.42	□□□□□ -0.74
MED17-208	ENST00000531920	C3orf67	Q6ZVT6	689 aa		10.4	□□□□□ -0.74
MED17-208	ENST00000531920	DCAF8	Q5TAQ9	597 aa		10.39	□□□□□ -0.75
MED17-208	ENST00000531920	FBXO3	Q9UK99	471 aa		10.39	□□□□□ -0.75
MED17-208	ENST00000531920	ILDR1	Q86SU0	546 aa	Predicted RBP	10.38	□□□□□ -0.75
MED17-208	ENST00000531920	HOXB3	P14651	431 aa	Predicted RBP	10.35	□□□□□ -0.75
MED17-208	ENST00000531920	MKRN3	Q13064	507 aa	Known RBP	10.32	□□□□□ -0.76
MED17-208	ENST00000531920	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.31	□□□□□ -0.76	8e-7	■■■■□ 21.2
MED17-208	ENST00000531920	HOXB1	P14653	301 aa	Predicted RBP	10.3	□□□□□ -0.76
MED17-208	ENST00000531920	DPY19L2	Q6NUT2	758 aa		10.28	□□□□□ -0.76
MED17-208	ENST00000531920	VASP	P50552	380 aa	Predicted RBP	10.27	□□□□□ -0.77
MED17-208	ENST00000531920	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.27	□□□□□ -0.77
MED17-208	ENST00000531920	RNF166	Q96A37	237 aa	Predicted RBP	10.26	□□□□□ -0.77
MED17-208	ENST00000531920	CHRM1	P11229	460 aa	Predicted RBP	10.25	□□□□□ -0.77
MED17-208	ENST00000531920	GOLGA2	Q08379	1002 aa		10.25	□□□□□ -0.77
MED17-208	ENST00000531920	PSEN1	P49768	467 aa		10.22	□□□□□ -0.77
MED17-208	ENST00000531920	PLCB2	Q00722	1185 aa		10.22	□□□□□ -0.77
MED17-208	ENST00000531920	DCAF8L2	P0C7V8	631 aa		10.21	□□□□□ -0.77
MED17-208	ENST00000531920	ERBB3	P21860	1342 aa		10.21	□□□□□ -0.78
MED17-208	ENST00000531920	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.2	□□□□□ -0.78
MED17-208	ENST00000531920	MYT1L	Q9UL68	1186 aa		10.19	□□□□□ -0.78
MED17-208	ENST00000531920	BOLA1	Q9Y3E2	137 aa		10.19	□□□□□ -0.78
MED17-208	ENST00000531920	GSE1	Q14687	1217 aa		10.18	□□□□□ -0.78
MED17-208	ENST00000531920	DOK7	Q18PE1	504 aa		10.16	□□□□□ -0.78
MED17-208	ENST00000531920	ZNF710	Q8N1W2	664 aa		10.16	□□□□□ -0.78
MED17-208	ENST00000531920	HAP1	P54257	671 aa	Predicted RBP	10.14	□□□□□ -0.79
MED17-208	ENST00000531920	VARS2	Q5ST30	1063 aa	Known RBP	10.14	□□□□□ -0.79
MED17-208	ENST00000531920	ZNF687	Q8N1G0	1237 aa		10.14	□□□□□ -0.79
MED17-208	ENST00000531920	KLHL34	Q8N239	644 aa		10.12	□□□□□ -0.79
MED17-208	ENST00000531920	PDAP1	Q13442	181 aa	Known RBP	10.11	□□□□□ -0.79
MED17-208	ENST00000531920	PKD2	Q13563	968 aa		10.09	□□□□□ -0.79
MED17-208	ENST00000531920		G3V3G9	751 aa		10.07	□□□□□ -0.8
MED17-208	ENST00000531920	PTGER2	P43116	358 aa		10.07	□□□□□ -0.8
MED17-208	ENST00000531920	GPR153	Q6NV75	609 aa		10.07	□□□□□ -0.8
MED17-208	ENST00000531920	ZSWIM6	Q9HCJ5	1215 aa		10.07	□□□□□ -0.8
MED17-208	ENST00000531920	CABP2	Q9NPB3	220 aa		10.07	□□□□□ -0.8
MED17-208	ENST00000531920	RIMBP2	O15034	1052 aa		10.04	□□□□□ -0.8
MED17-208	ENST00000531920	TMEM92	Q6UXU6	159 aa		10.04	□□□□□ -0.8

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