RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 NPM1P06748 294 aaKnown RBP eCLIP7.09□□□□□ -1.27
RC3H1-206ENST00000531594 ASTLQ6HA08 431 aaPredicted RBP7.09□□□□□ -1.27
RC3H1-206ENST00000531594 POTEGQ6S5H5 508 aa7.09□□□□□ -1.27
RC3H1-206ENST00000531594 TSPYL2Q9H2G4 693 aaPredicted RBP7.08□□□□□ -1.28
RC3H1-206ENST00000531594 TRPC6Q9Y210 931 aa7.08□□□□□ -1.28
RC3H1-206ENST00000531594 LCE2DQ5TA82 110 aaPredicted RBP7.07□□□□□ -1.28
RC3H1-206ENST00000531594 ATN1P54259 1190 aaPredicted RBP7.05□□□□□ -1.28
RC3H1-206ENST00000531594 POTEFA5A3E0 1075 aa7.04□□□□□ -1.28
RC3H1-206ENST00000531594 CCDC61Q9Y6R9 512 aa7.04□□□□□ -1.28
RC3H1-206ENST00000531594 PROM2Q8N271 834 aa7.03□□□□□ -1.28
RC3H1-206ENST00000531594 SLC39A7Q92504 469 aa7.02□□□□□ -1.29
RC3H1-206ENST00000531594 C7P10643 843 aa7.01□□□□□ -1.29
RC3H1-206ENST00000531594 KIF12Q96FN5 646 aa7.01□□□□□ -1.29
RC3H1-206ENST00000531594 BMP2KQ9NSY1 1161 aaPredicted RBP7.01□□□□□ -1.29
RC3H1-206ENST00000531594 RASEFQ8IZ41 740 aa6.98□□□□□ -1.29
RC3H1-206ENST00000531594 MAP3K13O43283 966 aa6.97□□□□□ -1.29
RC3H1-206ENST00000531594 FAM163AQ96GL9 167 aaPredicted RBP6.96□□□□□ -1.3
RC3H1-206ENST00000531594 COLQQ9Y215 455 aaPredicted RBP6.95□□□□□ -1.3
RC3H1-206ENST00000531594 TTLL13PA6NNM8 815 aa6.92□□□□□ -1.3
RC3H1-206ENST00000531594 MAMSTRQ6ZN01 415 aa6.92□□□□□ -1.3
RC3H1-206ENST00000531594 SCUBE2Q9NQ36 999 aa6.91□□□□□ -1.3
RC3H1-206ENST00000531594 TIE1P35590 1138 aa6.9□□□□□ -1.3
RC3H1-206ENST00000531594 MIER1Q8N108 512 aa6.9□□□□□ -1.3
RC3H1-206ENST00000531594 TRIM35Q9UPQ4 493 aa6.87□□□□□ -1.31
RC3H1-206ENST00000531594 PCDH10Q9P2E7 1040 aa6.85□□□□□ -1.31
RC3H1-206ENST00000531594 SEC24BO95487 1268 aa6.84□□□□□ -1.31
RC3H1-206ENST00000531594 NUBP1P53384 320 aa6.84□□□□□ -1.31
RC3H1-206ENST00000531594 IFNL1Q8IU54 200 aa6.84□□□□□ -1.31
RC3H1-206ENST00000531594 PCDHB13Q9Y5F0 798 aa6.84□□□□□ -1.31
RC3H1-206ENST00000531594 PLCD3Q8N3E9 789 aa6.81□□□□□ -1.32
RC3H1-206ENST00000531594 CDAN1Q8IWY9 1227 aa6.8□□□□□ -1.32
RC3H1-206ENST00000531594 ST18O60284 1047 aa6.79□□□□□ -1.32
RC3H1-206ENST00000531594 PLEKHG5O94827 1062 aa6.79□□□□□ -1.32
RC3H1-206ENST00000531594 SLAIN1Q8ND83 568 aa6.79□□□□□ -1.32
RC3H1-206ENST00000531594 IER5LQ5T953 404 aa6.78□□□□□ -1.32
RC3H1-206ENST00000531594 TMEM106CQ9BVX2 250 aa6.78□□□□□ -1.32
RC3H1-206ENST00000531594 IRX5P78411 483 aaPredicted RBP6.76□□□□□ -1.33
RC3H1-206ENST00000531594 SGIP1Q9BQI5 828 aa6.76□□□□□ -1.33
RC3H1-206ENST00000531594 PYGBP11216 843 aa6.73□□□□□ -1.33
RC3H1-206ENST00000531594 PLCG2P16885 1265 aa6.73□□□□□ -1.33
RC3H1-206ENST00000531594 FAM212AQ96EL1 285 aa6.72□□□□□ -1.33
RC3H1-206ENST00000531594 PCDHB8Q9UN66 801 aa6.72□□□□□ -1.33
RC3H1-206ENST00000531594 FKBP8Q14318 412 aa6.69□□□□□ -1.34
RC3H1-206ENST00000531594 MARVELD3Q96A59 401 aa6.69□□□□□ -1.34
RC3H1-206ENST00000531594 ZBTB47Q9UFB7 747 aaPredicted RBP6.67□□□□□ -1.34
RC3H1-206ENST00000531594 MMRN1Q13201 1228 aa6.66□□□□□ -1.34
RC3H1-206ENST00000531594 DCAF8Q5TAQ9 597 aa6.66□□□□□ -1.34
RC3H1-206ENST00000531594 OCEL1Q9H607 264 aa6.66□□□□□ -1.34
RC3H1-206ENST00000531594 SPNS2Q8IVW8 549 aa6.65□□□□□ -1.34
RC3H1-206ENST00000531594 PDCD7Q8N8D1 485 aaKnown RBP6.64□□□□□ -1.35
RC3H1-206ENST00000531594 POTEB3A0JP26 581 aa6.63□□□□□ -1.35
RC3H1-206ENST00000531594 POTEBQ6S5H4 581 aa6.63□□□□□ -1.35
RC3H1-206ENST00000531594 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.62□□□□□ -1.35
RC3H1-206ENST00000531594 TMEM121BQ9BXQ6 578 aaPredicted RBP6.6□□□□□ -1.35
RC3H1-206ENST00000531594 KRTAP3-3Q9BYR6 98 aa6.58□□□□□ -1.36
RC3H1-206ENST00000531594 KRTAP3-2Q9BYR7 98 aa6.58□□□□□ -1.36
RC3H1-206ENST00000531594 DPY19L2Q6NUT2 758 aa6.57□□□□□ -1.36
RC3H1-206ENST00000531594 EMP3P54852 163 aa6.55□□□□□ -1.36
RC3H1-206ENST00000531594 C3orf67Q6ZVT6 689 aa6.55□□□□□ -1.36
RC3H1-206ENST00000531594 FAM205CA6NFA0 338 aa6.54□□□□□ -1.36
RC3H1-206ENST00000531594 SNPHO15079 494 aa6.54□□□□□ -1.36
RC3H1-206ENST00000531594 HS3ST6Q96QI5 342 aa6.54□□□□□ -1.36
RC3H1-206ENST00000531594 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.54□□□□□ -1.36
RC3H1-206ENST00000531594 PSEN1P49768 467 aa6.53□□□□□ -1.36
RC3H1-206ENST00000531594 VASPP50552 380 aaPredicted RBP6.52□□□□□ -1.37
RC3H1-206ENST00000531594 MKRN3Q13064 507 aaKnown RBP6.52□□□□□ -1.37
RC3H1-206ENST00000531594 ZNF467Q7Z7K2 595 aaPredicted RBP6.51□□□□□ -1.37
RC3H1-206ENST00000531594 ILDR1Q86SU0 546 aaPredicted RBP6.51□□□□□ -1.37
RC3H1-206ENST00000531594 KLHL34Q8N239 644 aa6.51□□□□□ -1.37
RC3H1-206ENST00000531594 GOLGA2Q08379 1002 aa6.5□□□□□ -1.37
RC3H1-206ENST00000531594 HOXB3P14651 431 aaPredicted RBP6.49□□□□□ -1.37
RC3H1-206ENST00000531594 L3MBTL3Q96JM7 780 aaPredicted RBP6.49□□□□□ -1.37
RC3H1-206ENST00000531594 GSE1Q14687 1217 aa6.48□□□□□ -1.37
RC3H1-206ENST00000531594 CABP2Q9NPB3 220 aa6.48□□□□□ -1.37
RC3H1-206ENST00000531594 FBXO3Q9UK99 471 aa6.48□□□□□ -1.37
RC3H1-206ENST00000531594 CHRM1P11229 460 aaPredicted RBP6.47□□□□□ -1.37
RC3H1-206ENST00000531594 PDAP1Q13442 181 aaKnown RBP6.45□□□□□ -1.38
RC3H1-206ENST00000531594 BOLA1Q9Y3E2 137 aa6.44□□□□□ -1.38
RC3H1-206ENST00000531594 IFNLR1Q8IU57 520 aaPredicted RBP6.43□□□□□ -1.38
RC3H1-206ENST00000531594 TMEM92Q6UXU6 159 aa6.41□□□□□ -1.38
RC3H1-206ENST00000531594 CIZ1Q9ULV3 898 aaPredicted RBP6.41□□□□□ -1.38
RC3H1-206ENST00000531594 HOXB1P14653 301 aaPredicted RBP6.4□□□□□ -1.38
RC3H1-206ENST00000531594 EFCAB3Q8N7B9 438 aa6.39□□□□□ -1.39
RC3H1-206ENST00000531594 ERBB3P21860 1342 aa6.37□□□□□ -1.39
RC3H1-206ENST00000531594 VARS2Q5ST30 1063 aaKnown RBP6.37□□□□□ -1.39
RC3H1-206ENST00000531594 ZNF710Q8N1W2 664 aa6.37□□□□□ -1.39
RC3H1-206ENST00000531594 SPOCK2Q92563 424 aa6.37□□□□□ -1.39
RC3H1-206ENST00000531594 G3V3G9 751 aa6.35□□□□□ -1.39
RC3H1-206ENST00000531594 MICALL2Q8IY33 904 aa6.34□□□□□ -1.39
RC3H1-206ENST00000531594 RNF166Q96A37 237 aaPredicted RBP6.34□□□□□ -1.39
RC3H1-206ENST00000531594 MS4A4AQ96JQ5 239 aa6.34□□□□□ -1.39
RC3H1-206ENST00000531594 DOK7Q18PE1 504 aa6.33□□□□□ -1.4
RC3H1-206ENST00000531594 GPR153Q6NV75 609 aa6.31□□□□□ -1.4
RC3H1-206ENST00000531594 KHSRPQ92945 711 aaKnown RBP eCLIP6.31□□□□□ -1.4
RC3H1-206ENST00000531594 RNF25Q96BH1 459 aaPredicted RBP6.31□□□□□ -1.4
RC3H1-206ENST00000531594 MYT1LQ9UL68 1186 aa6.29□□□□□ -1.4
RC3H1-206ENST00000531594 PHF8Q9UPP1 1060 aa6.29□□□□□ -1.4
RC3H1-206ENST00000531594 ZNF687Q8N1G0 1237 aa6.28□□□□□ -1.4
RC3H1-206ENST00000531594 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.27□□□□□ -1.41
RC3H1-206ENST00000531594 ARSIQ5FYB1 569 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms