RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 ZRANB1Q9UGI0 708 aa12.56□□□□□ -0.4
ATM-216ENST00000531525 PAK3O75914 559 aaPredicted RBP12.55□□□□□ -0.4
ATM-216ENST00000531525 FAM212AQ96EL1 285 aa12.53□□□□□ -0.4
ATM-216ENST00000531525 CCDC61Q9Y6R9 512 aa12.52□□□□□ -0.41
ATM-216ENST00000531525 DCAF8Q5TAQ9 597 aa12.5□□□□□ -0.41
ATM-216ENST00000531525 ZNF579Q8NAF0 562 aaKnown RBP12.5□□□□□ -0.41
ATM-216ENST00000531525 GSE1Q14687 1217 aa12.47□□□□□ -0.41
ATM-216ENST00000531525 SP7Q8TDD2 431 aaPredicted RBP12.46□□□□□ -0.42
ATM-216ENST00000531525 PHF12Q96QT6 1004 aa12.45□□□□□ -0.42
ATM-216ENST00000531525 CIZ1Q9ULV3 898 aaPredicted RBP12.44□□□□□ -0.42
ATM-216ENST00000531525 KIF12Q96FN5 646 aa12.39□□□□□ -0.43
ATM-216ENST00000531525 PYGBP11216 843 aa12.38□□□□□ -0.43
ATM-216ENST00000531525 GABBR2O75899 941 aa12.37□□□□□ -0.43
ATM-216ENST00000531525 PLCB2Q00722 1185 aa12.37□□□□□ -0.43
ATM-216ENST00000531525 BCANQ96GW7 911 aa12.37□□□□□ -0.43
ATM-216ENST00000531525 PKD2Q13563 968 aa12.36□□□□□ -0.43
ATM-216ENST00000531525 MAP3K13O43283 966 aa12.35□□□□□ -0.43
ATM-216ENST00000531525 CLCN6P51797 869 aa12.35□□□□□ -0.43
ATM-216ENST00000531525 CHRM1P11229 460 aaPredicted RBP12.33□□□□□ -0.44
ATM-216ENST00000531525 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
ATM-216ENST00000531525 HAP1P54257 671 aaPredicted RBP12.32□□□□□ -0.44
ATM-216ENST00000531525 GALR2O43603 387 aaPredicted RBP12.32□□□□□ -0.44
ATM-216ENST00000531525 MS4A3Q96HJ5 214 aa12.32□□□□□ -0.44
ATM-216ENST00000531525 TRIM41Q8WV44 630 aa12.31□□□□□ -0.44
ATM-216ENST00000531525 SGIP1Q9BQI5 828 aa12.29□□□□□ -0.44
ATM-216ENST00000531525 PCDHB13Q9Y5F0 798 aa12.28□□□□□ -0.44
ATM-216ENST00000531525 IFNL1Q8IU54 200 aa12.26□□□□□ -0.45
ATM-216ENST00000531525 ECM2O94769 699 aaPredicted RBP12.25□□□□□ -0.45
ATM-216ENST00000531525 RNF25Q96BH1 459 aaPredicted RBP12.22□□□□□ -0.45
ATM-216ENST00000531525 PCDHB8Q9UN66 801 aa12.22□□□□□ -0.45
ATM-216ENST00000531525 TRPC6Q9Y210 931 aa12.22□□□□□ -0.45
ATM-216ENST00000531525 DAXXQ9UER7 740 aaPredicted RBP12.21□□□□□ -0.46
ATM-216ENST00000531525 TPRNQ4KMQ1 711 aa12.19□□□□□ -0.46
ATM-216ENST00000531525 ZNF467Q7Z7K2 595 aaPredicted RBP12.19□□□□□ -0.46
ATM-216ENST00000531525 RGL2O15211 777 aa12.16□□□□□ -0.46
ATM-216ENST00000531525 POTEIP0CG38 1075 aa12.15□□□□□ -0.46
ATM-216ENST00000531525 RIOK3O14730 519 aaKnown RBP12.13□□□□□ -0.47
ATM-216ENST00000531525 ABCC9O60706 1549 aa12.13□□□□□ -0.47
ATM-216ENST00000531525 TIE1P35590 1138 aa12.12□□□□□ -0.47
ATM-216ENST00000531525 DCBLD2Q96PD2 775 aa12.12□□□□□ -0.47
ATM-216ENST00000531525 BMP2KQ9NSY1 1161 aaPredicted RBP12.11□□□□□ -0.47
ATM-216ENST00000531525 ASTLQ6HA08 431 aaPredicted RBP12.1□□□□□ -0.47
ATM-216ENST00000531525 TTLL13PA6NNM8 815 aa12.08□□□□□ -0.48
ATM-216ENST00000531525 ATMINO43313 823 aaPredicted RBP12.08□□□□□ -0.48
ATM-216ENST00000531525 PDAP1Q13442 181 aaKnown RBP12.08□□□□□ -0.48
ATM-216ENST00000531525 PSEN1P49768 467 aa12.07□□□□□ -0.48
ATM-216ENST00000531525 ATN1P54259 1190 aaPredicted RBP12.06□□□□□ -0.48
ATM-216ENST00000531525 TMEM106CQ9BVX2 250 aa12.06□□□□□ -0.48
ATM-216ENST00000531525 VGFO15240 615 aaPredicted RBP12.06□□□□□ -0.48
ATM-216ENST00000531525 PELP1Q8IZL8 1130 aaKnown RBP12.04□□□□□ -0.48
ATM-216ENST00000531525 CCDC180Q9P1Z9 1646 aa12.04□□□□□ -0.48
ATM-216ENST00000531525 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.03□□□□□ -0.48
ATM-216ENST00000531525 DCAF8L2P0C7V8 631 aa12.03□□□□□ -0.48
ATM-216ENST00000531525 ZFP91Q96JP5 570 aaPredicted RBP12.03□□□□□ -0.48
ATM-216ENST00000531525 VSIG10Q8N0Z9 540 aa12.01□□□□□ -0.49
ATM-216ENST00000531525 TIMELESSQ9UNS1 1208 aa12.01□□□□□ -0.49
ATM-216ENST00000531525 TRIM35Q9UPQ4 493 aa12□□□□□ -0.49
ATM-216ENST00000531525 TULP1O00294 542 aaPredicted RBP11.96□□□□□ -0.5
ATM-216ENST00000531525 ARXQ96QS3 562 aa11.95□□□□□ -0.5
ATM-216ENST00000531525 BCL11BQ9C0K0 894 aaPredicted RBP11.94□□□□□ -0.5
ATM-216ENST00000531525 STK25O00506 426 aa11.93□□□□□ -0.5
ATM-216ENST00000531525 CABP2Q9NPB3 220 aa11.93□□□□□ -0.5
ATM-216ENST00000531525 SLC39A7Q92504 469 aa11.91□□□□□ -0.5
ATM-216ENST00000531525 STK24Q9Y6E0 443 aa11.91□□□□□ -0.5
ATM-216ENST00000531525 HS6ST3Q8IZP7 471 aa11.9□□□□□ -0.5
ATM-216ENST00000531525 C7P10643 843 aa11.89□□□□□ -0.51
ATM-216ENST00000531525 IER5LQ5T953 404 aa11.89□□□□□ -0.51
ATM-216ENST00000531525 METRNQ9UJH8 293 aa11.89□□□□□ -0.51
ATM-216ENST00000531525 CHGAP10645 457 aaKnown RBP11.88□□□□□ -0.51
ATM-216ENST00000531525 GOLGA2Q08379 1002 aa11.88□□□□□ -0.51
ATM-216ENST00000531525 EFCAB3Q8N7B9 438 aa11.87□□□□□ -0.51
ATM-216ENST00000531525 POTEFA5A3E0 1075 aa11.86□□□□□ -0.51
ATM-216ENST00000531525 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
ATM-216ENST00000531525 IRX5P78411 483 aaPredicted RBP11.85□□□□□ -0.51
ATM-216ENST00000531525 COLQQ9Y215 455 aaPredicted RBP11.84□□□□□ -0.51
ATM-216ENST00000531525 ILDR1Q86SU0 546 aaPredicted RBP11.81□□□□□ -0.52
ATM-216ENST00000531525 DNAJC5Q9H3Z4 198 aa11.81□□□□□ -0.52
ATM-216ENST00000531525 KDM2AQ9Y2K7 1162 aa11.81□□□□□ -0.52
ATM-216ENST00000531525 SOX12O15370 315 aa11.79□□□□□ -0.52
ATM-216ENST00000531525 SEC24BO95487 1268 aa11.79□□□□□ -0.52
ATM-216ENST00000531525 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
ATM-216ENST00000531525 OCEL1Q9H607 264 aa11.78□□□□□ -0.52
ATM-216ENST00000531525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.78□□□□□ -0.522e-7■■■□□ 17.9
ATM-216ENST00000531525 GTF3C3Q9Y5Q9 886 aa11.78□□□□□ -0.52
ATM-216ENST00000531525 POTEB2H3BUK9 544 aa11.77□□□□□ -0.52
ATM-216ENST00000531525 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
ATM-216ENST00000531525 MFRPQ9BY79 579 aa11.76□□□□□ -0.53
ATM-216ENST00000531525 PHF8Q9UPP1 1060 aa11.76□□□□□ -0.53
ATM-216ENST00000531525 PLCG2P16885 1265 aa11.76□□□□□ -0.53
ATM-216ENST00000531525 FBXO22Q8NEZ5 403 aa11.73□□□□□ -0.53
ATM-216ENST00000531525 MS4A4AQ96JQ5 239 aa11.73□□□□□ -0.53
ATM-216ENST00000531525 POTEJP0CG39 1038 aa11.7□□□□□ -0.54
ATM-216ENST00000531525 NLRP6P59044 892 aa11.7□□□□□ -0.54
ATM-216ENST00000531525 DPY19L2Q6NUT2 758 aa11.7□□□□□ -0.54
ATM-216ENST00000531525 LHX8Q68G74 356 aa11.69□□□□□ -0.54
ATM-216ENST00000531525 HOMEZQ8IX15 550 aa11.69□□□□□ -0.54
ATM-216ENST00000531525 BBXQ8WY36 941 aaPredicted RBP11.67□□□□□ -0.54
ATM-216ENST00000531525 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.55
ATM-216ENST00000531525 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
ATM-216ENST00000531525 GTPBP6O43824 516 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms