RNA–Protein interactions for RNA: ENST00000530747.5

ARHGEF12-210, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 5

Gene ARHGEF12, Length 1,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-210ENST00000530747 TAF7LQ5H9L4 462 aa9.02□□□□□ -0.97
ARHGEF12-210ENST00000530747 SHROOM4Q9ULL8 1493 aa9.01□□□□□ -0.97
ARHGEF12-210ENST00000530747 PIP4P2Q8N4L2 257 aa8.99□□□□□ -0.97
ARHGEF12-210ENST00000530747 POLA2Q14181 598 aa8.97□□□□□ -0.97
ARHGEF12-210ENST00000530747 NEFLP07196 543 aa8.97□□□□□ -0.97
ARHGEF12-210ENST00000530747 HSP90B1P14625 803 aaKnown RBP8.95□□□□□ -0.98
ARHGEF12-210ENST00000530747 AKT1S1Q96B36 256 aa8.95□□□□□ -0.98
ARHGEF12-210ENST00000530747 ZBTB12Q9Y330 459 aaPredicted RBP8.95□□□□□ -0.98
ARHGEF12-210ENST00000530747 MYCNP04198 464 aaPredicted RBP8.94□□□□□ -0.98
ARHGEF12-210ENST00000530747 PKNOX2Q96KN3 472 aa8.93□□□□□ -0.98
ARHGEF12-210ENST00000530747 HMGB1P09429 215 aaKnown RBP8.92□□□□□ -0.98
ARHGEF12-210ENST00000530747 PUS7Q96PZ0 661 aaKnown RBP8.88□□□□□ -0.99
ARHGEF12-210ENST00000530747 CCDC9Q9Y3X0 531 aaKnown RBP8.88□□□□□ -0.99
ARHGEF12-210ENST00000530747 BCL11BQ9C0K0 894 aaPredicted RBP8.88□□□□□ -0.99
ARHGEF12-210ENST00000530747 POTEMA6NI47 508 aa8.87□□□□□ -0.99
ARHGEF12-210ENST00000530747 FGD1P98174 961 aa8.84□□□□□ -0.99
ARHGEF12-210ENST00000530747 EVX2Q03828 476 aa8.83□□□□□ -1
ARHGEF12-210ENST00000530747 POTEGQ6S5H5 508 aa8.79□□□□□ -1
ARHGEF12-210ENST00000530747 REM2Q8IYK8 340 aaPredicted RBP8.79□□□□□ -1
ARHGEF12-210ENST00000530747 RSPH4AQ5TD94 716 aa8.78□□□□□ -1
ARHGEF12-210ENST00000530747 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.78□□□□□ -1
ARHGEF12-210ENST00000530747 BCCIPQ9P287 314 aaKnown RBP eCLIP8.76□□□□□ -1.01
ARHGEF12-210ENST00000530747 FXR2P51116 673 aaKnown RBP eCLIP8.76□□□□□ -1.012e-8■■■■□ 20.3
ARHGEF12-210ENST00000530747 NBR1Q14596 966 aa8.74□□□□□ -1.01
ARHGEF12-210ENST00000530747 NECTIN2Q92692 538 aa8.74□□□□□ -1.01
ARHGEF12-210ENST00000530747 CFAP44Q96MT7 982 aa8.74□□□□□ -1.01
ARHGEF12-210ENST00000530747 GABBR2O75899 941 aa8.72□□□□□ -1.01
ARHGEF12-210ENST00000530747 TSHZ2Q9NRE2 1034 aa8.68□□□□□ -1.02
ARHGEF12-210ENST00000530747 ZBTB7CA1YPR0 619 aa8.67□□□□□ -1.02
ARHGEF12-210ENST00000530747 PITPNM1O00562 1244 aa8.67□□□□□ -1.02
ARHGEF12-210ENST00000530747 OSCARQ8IYS5 282 aa8.67□□□□□ -1.02
ARHGEF12-210ENST00000530747 PAXIP1Q6ZW49 1069 aaPredicted RBP8.66□□□□□ -1.02
ARHGEF12-210ENST00000530747 DNAJC5Q9H3Z4 198 aa8.64□□□□□ -1.03
ARHGEF12-210ENST00000530747 ANO8Q9HCE9 1232 aaPredicted RBP8.64□□□□□ -1.03
ARHGEF12-210ENST00000530747 POLR3GLQ9BT43 218 aa8.63□□□□□ -1.03
ARHGEF12-210ENST00000530747 RSPH6AQ9H0K4 717 aa8.62□□□□□ -1.03
ARHGEF12-210ENST00000530747 CENPBP07199 599 aaPredicted RBP8.61□□□□□ -1.03
ARHGEF12-210ENST00000530747 C1orf115Q9H7X2 142 aa8.61□□□□□ -1.03
ARHGEF12-210ENST00000530747 FOXD4L1Q9NU39 408 aa8.61□□□□□ -1.03
ARHGEF12-210ENST00000530747 ZNF326Q5BKZ1 582 aaKnown RBP8.6□□□□□ -1.03
ARHGEF12-210ENST00000530747 BBXQ8WY36 941 aaPredicted RBP8.6□□□□□ -1.03
ARHGEF12-210ENST00000530747 AAMPQ13685 434 aa8.6□□□□□ -1.03
ARHGEF12-210ENST00000530747 TICAM2Q86XR7 235 aa8.59□□□□□ -1.03
ARHGEF12-210ENST00000530747 CCDC136Q96JN2 1154 aa8.58□□□□□ -1.04
ARHGEF12-210ENST00000530747 ARID3AQ99856 593 aa8.58□□□□□ -1.04
ARHGEF12-210ENST00000530747 NPM1P06748 294 aaKnown RBP eCLIP8.57□□□□□ -1.04
ARHGEF12-210ENST00000530747 BRPF1P55201 1214 aaPredicted RBP8.57□□□□□ -1.04
ARHGEF12-210ENST00000530747 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.57□□□□□ -1.04
ARHGEF12-210ENST00000530747 RGS22Q8NE09 1264 aa8.56□□□□□ -1.04
ARHGEF12-210ENST00000530747 ZNF692Q9BU19 519 aaPredicted RBP8.56□□□□□ -1.04
ARHGEF12-210ENST00000530747 BRPF3Q9ULD4 1205 aa8.56□□□□□ -1.04
ARHGEF12-210ENST00000530747 IRX6P78412 446 aaPredicted RBP8.56□□□□□ -1.04
ARHGEF12-210ENST00000530747 SPDYE2BA6NHP3 402 aa8.55□□□□□ -1.04
ARHGEF12-210ENST00000530747 SPDYE6P0CI01 402 aa8.55□□□□□ -1.04
ARHGEF12-210ENST00000530747 SPDYE2Q495Y8 402 aa8.55□□□□□ -1.04
ARHGEF12-210ENST00000530747 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.54□□□□□ -1.04
ARHGEF12-210ENST00000530747 ATF5Q9Y2D1 282 aaPredicted RBP8.54□□□□□ -1.04
ARHGEF12-210ENST00000530747 C19orf67A6NJJ6 358 aa8.53□□□□□ -1.04
ARHGEF12-210ENST00000530747 ZMYND15Q9H091 742 aa8.53□□□□□ -1.04
ARHGEF12-210ENST00000530747 PKD2Q13563 968 aa8.52□□□□□ -1.04
ARHGEF12-210ENST00000530747 ZFP91Q96JP5 570 aaPredicted RBP8.52□□□□□ -1.04
ARHGEF12-210ENST00000530747 SPDYE1Q8NFV5 336 aaPredicted RBP8.52□□□□□ -1.05
ARHGEF12-210ENST00000530747 ZNF592Q92610 1267 aa8.52□□□□□ -1.05
ARHGEF12-210ENST00000530747 ZNF428Q96B54 188 aa8.52□□□□□ -1.05
ARHGEF12-210ENST00000530747 ZEB1P37275 1124 aaPredicted RBP8.51□□□□□ -1.05
ARHGEF12-210ENST00000530747 PRKAR2AP13861 404 aaKnown RBP8.49□□□□□ -1.05
ARHGEF12-210ENST00000530747 TMED8Q6PL24 325 aaPredicted RBP8.48□□□□□ -1.05
ARHGEF12-210ENST00000530747 NAP1L5Q96NT1 182 aaPredicted RBP8.48□□□□□ -1.05
ARHGEF12-210ENST00000530747 CLSTN1O94985 981 aa8.48□□□□□ -1.05
ARHGEF12-210ENST00000530747 KCTD17Q8N5Z5 321 aa8.48□□□□□ -1.05
ARHGEF12-210ENST00000530747 RAD21O60216 631 aa8.47□□□□□ -1.05
ARHGEF12-210ENST00000530747 CLEC11AQ9Y240 323 aa8.46□□□□□ -1.05
ARHGEF12-210ENST00000530747 ATXN8OSP0DMR3 200 aa8.46□□□□□ -1.06
ARHGEF12-210ENST00000530747 CC2D2BQ6DHV5 1058 aa8.46□□□□□ -1.06
ARHGEF12-210ENST00000530747 CERS3Q8IU89 383 aa8.46□□□□□ -1.06
ARHGEF12-210ENST00000530747 MTMR7Q9Y216 660 aa8.46□□□□□ -1.06
ARHGEF12-210ENST00000530747 FAM177A1Q8N128 213 aaPredicted RBP8.44□□□□□ -1.06
ARHGEF12-210ENST00000530747 CWC22Q9HCG8 908 aaKnown RBP8.44□□□□□ -1.06
ARHGEF12-210ENST00000530747 ANP32EQ9BTT0 268 aa8.43□□□□□ -1.06
ARHGEF12-210ENST00000530747 A0A0U1RQG5 324 aaPredicted RBP8.42□□□□□ -1.06
ARHGEF12-210ENST00000530747 PSMD1Q99460 953 aa8.42□□□□□ -1.06
ARHGEF12-210ENST00000530747 OTUD5Q96G74 571 aa8.42□□□□□ -1.06
ARHGEF12-210ENST00000530747 POTEIP0CG38 1075 aa8.41□□□□□ -1.06
ARHGEF12-210ENST00000530747 CLCN6P51797 869 aa8.41□□□□□ -1.06
ARHGEF12-210ENST00000530747 SPRYD3Q8NCJ5 442 aa8.4□□□□□ -1.06
ARHGEF12-210ENST00000530747 RBM25P49756 843 aaKnown RBP8.39□□□□□ -1.07
ARHGEF12-210ENST00000530747 FOXD4L5Q5VV16 416 aaPredicted RBP8.39□□□□□ -1.07
ARHGEF12-210ENST00000530747 FOXD4L4Q8WXT5 416 aaPredicted RBP8.39□□□□□ -1.07
ARHGEF12-210ENST00000530747 PRDM16Q9HAZ2 1276 aa8.39□□□□□ -1.07
ARHGEF12-210ENST00000530747 RBM10P98175 930 aaKnown RBP8.39□□□□□ -1.07
ARHGEF12-210ENST00000530747 CHRM1P11229 460 aaPredicted RBP8.35□□□□□ -1.07
ARHGEF12-210ENST00000530747 ARID3CA6NKF2 412 aa8.35□□□□□ -1.07
ARHGEF12-210ENST00000530747 NCLP19338 710 aaKnown RBP8.35□□□□□ -1.07
ARHGEF12-210ENST00000530747 TEX2Q8IWB9 1127 aa8.34□□□□□ -1.07
ARHGEF12-210ENST00000530747 USP35Q9P2H5 1018 aa8.32□□□□□ -1.08
ARHGEF12-210ENST00000530747 CLSPNQ9HAW4 1339 aa8.32□□□□□ -1.08
ARHGEF12-210ENST00000530747 PRR29P0C7W0 189 aa8.31□□□□□ -1.08
ARHGEF12-210ENST00000530747 PRDM10Q9NQV6 1147 aa8.31□□□□□ -1.08
ARHGEF12-210ENST00000530747 CCDC27Q2M243 656 aa8.3□□□□□ -1.08
ARHGEF12-210ENST00000530747 ERICH6BQ5W0A0 696 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms