RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 RBM42Q9BTD8 480 aaKnown RBP14.5□□□□□ -0.09
SVIP-204ENST00000530199 AKT1S1Q96B36 256 aa14.49□□□□□ -0.09
SVIP-204ENST00000530199 SPDYE1Q8NFV5 336 aaPredicted RBP14.48□□□□□ -0.09
SVIP-204ENST00000530199 SCRIBQ14160 1630 aa14.46□□□□□ -0.09
SVIP-204ENST00000530199 VSIG10Q8N0Z9 540 aa14.42□□□□□ -0.1
SVIP-204ENST00000530199 PAXIP1Q6ZW49 1069 aaPredicted RBP14.41□□□□□ -0.1
SVIP-204ENST00000530199 DCAF1Q9Y4B6 1507 aa14.4□□□□□ -0.1
SVIP-204ENST00000530199 NUBP1P53384 320 aa14.38□□□□□ -0.11
SVIP-204ENST00000530199 GSE1Q14687 1217 aa14.37□□□□□ -0.11
SVIP-204ENST00000530199 CLEC11AQ9Y240 323 aa14.37□□□□□ -0.11
SVIP-204ENST00000530199 CFAP44Q96MT7 982 aa14.36□□□□□ -0.11
SVIP-204ENST00000530199 CHGAP10645 457 aaKnown RBP14.35□□□□□ -0.11
SVIP-204ENST00000530199 REM2Q8IYK8 340 aaPredicted RBP14.35□□□□□ -0.11
SVIP-204ENST00000530199 PRR29P0C7W0 189 aa14.34□□□□□ -0.11
SVIP-204ENST00000530199 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
SVIP-204ENST00000530199 SPRYD3Q8NCJ5 442 aa14.32□□□□□ -0.12
SVIP-204ENST00000530199 MNX1P50219 401 aaPredicted RBP14.29□□□□□ -0.12
SVIP-204ENST00000530199 DCAF8Q5TAQ9 597 aa14.28□□□□□ -0.12
SVIP-204ENST00000530199 RNF25Q96BH1 459 aaPredicted RBP14.28□□□□□ -0.12
SVIP-204ENST00000530199 KDM2AQ9Y2K7 1162 aa14.26□□□□□ -0.13
SVIP-204ENST00000530199 HS6ST3Q8IZP7 471 aa14.25□□□□□ -0.13
SVIP-204ENST00000530199 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
SVIP-204ENST00000530199 BCANQ96GW7 911 aa14.24□□□□□ -0.13
SVIP-204ENST00000530199 THOC2Q8NI27 1593 aaKnown RBP14.24□□□□□ -0.13
SVIP-204ENST00000530199 FAM212AQ96EL1 285 aa14.22□□□□□ -0.13
SVIP-204ENST00000530199 NCAPD3P42695 1498 aa14.21□□□□□ -0.13
SVIP-204ENST00000530199 RIOK3O14730 519 aaKnown RBP14.19□□□□□ -0.14
SVIP-204ENST00000530199 PITPNM1O00562 1244 aa14.18□□□□□ -0.14
SVIP-204ENST00000530199 TSHZ2Q9NRE2 1034 aa14.18□□□□□ -0.14
SVIP-204ENST00000530199 RASEFQ8IZ41 740 aa14.16□□□□□ -0.14
SVIP-204ENST00000530199 TAOK2Q9UL54 1235 aa14.16□□□□□ -0.14
SVIP-204ENST00000530199 NESP48681 1621 aa14.15□□□□□ -0.14
SVIP-204ENST00000530199 CHRM1P11229 460 aaPredicted RBP14.14□□□□□ -0.15
SVIP-204ENST00000530199 VGFO15240 615 aaPredicted RBP14.07□□□□□ -0.16
SVIP-204ENST00000530199 NKX1-1Q15270 411 aaPredicted RBP14.06□□□□□ -0.16
SVIP-204ENST00000530199 STK25O00506 426 aa14.04□□□□□ -0.16
SVIP-204ENST00000530199 BAZ1AQ9NRL2 1556 aaPredicted RBP14.01□□□□□ -0.17
SVIP-204ENST00000530199 PYGBP11216 843 aa14.01□□□□□ -0.17
SVIP-204ENST00000530199 SGIP1Q9BQI5 828 aa14.01□□□□□ -0.17
SVIP-204ENST00000530199 HMGXB3Q12766 1538 aa14□□□□□ -0.17
SVIP-204ENST00000530199 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
SVIP-204ENST00000530199 SMARCA2P51531 1590 aa14□□□□□ -0.17
SVIP-204ENST00000530199 LAMC3Q9Y6N6 1575 aa14□□□□□ -0.17
SVIP-204ENST00000530199 GTPBP6O43824 516 aaPredicted RBP13.98□□□□□ -0.17
SVIP-204ENST00000530199 CHADLQ6NUI6 762 aa13.97□□□□□ -0.17
SVIP-204ENST00000530199 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.96□□□□□ -0.17
SVIP-204ENST00000530199 ZFP91Q96JP5 570 aaPredicted RBP13.96□□□□□ -0.17
SVIP-204ENST00000530199 BCL11BQ9C0K0 894 aaPredicted RBP13.94□□□□□ -0.18
SVIP-204ENST00000530199 KIF21AQ7Z4S6 1674 aa13.94□□□□□ -0.18
SVIP-204ENST00000530199 PDS5BQ9NTI5 1447 aa13.93□□□□□ -0.18
SVIP-204ENST00000530199 STK24Q9Y6E0 443 aa13.93□□□□□ -0.18
SVIP-204ENST00000530199 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
SVIP-204ENST00000530199 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
SVIP-204ENST00000530199 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
SVIP-204ENST00000530199 PRKCSHP14314 528 aaPredicted RBP13.91□□□□□ -0.18
SVIP-204ENST00000530199 FARP1Q9Y4F1 1045 aaPredicted RBP13.91□□□□□ -0.18
SVIP-204ENST00000530199 TSPYL2Q9H2G4 693 aaPredicted RBP13.89□□□□□ -0.19
SVIP-204ENST00000530199 WDR62O43379 1518 aa13.87□□□□□ -0.19
SVIP-204ENST00000530199 RYDENQ9NUL5 291 aaKnown RBP13.85□□□□□ -0.19
SVIP-204ENST00000530199 MRC2Q9UBG0 1479 aa13.85□□□□□ -0.19
SVIP-204ENST00000530199 ZNF467Q7Z7K2 595 aaPredicted RBP13.83□□□□□ -0.2
SVIP-204ENST00000530199 PRKAR2AP13861 404 aaKnown RBP13.82□□□□□ -0.2
SVIP-204ENST00000530199 ARHGEF11O15085 1522 aa13.81□□□□□ -0.2
SVIP-204ENST00000530199 TPRNQ4KMQ1 711 aa13.79□□□□□ -0.2
SVIP-204ENST00000530199 FXR2P51116 673 aaKnown RBP eCLIP13.78□□□□□ -0.2
SVIP-204ENST00000530199 BAZ1BQ9UIG0 1483 aaKnown RBP13.78□□□□□ -0.2
SVIP-204ENST00000530199 CCDC61Q9Y6R9 512 aa13.77□□□□□ -0.21
SVIP-204ENST00000530199 PDAP1Q13442 181 aaKnown RBP13.76□□□□□ -0.21
SVIP-204ENST00000530199 NBR1Q14596 966 aa13.76□□□□□ -0.21
SVIP-204ENST00000530199 PCDHB8Q9UN66 801 aa13.75□□□□□ -0.21
SVIP-204ENST00000530199 PCDHB13Q9Y5F0 798 aa13.75□□□□□ -0.21
SVIP-204ENST00000530199 SMARCA4P51532 1647 aa13.74□□□□□ -0.21
SVIP-204ENST00000530199 CYB5RLQ6IPT4 315 aa13.72□□□□□ -0.21
SVIP-204ENST00000530199 ZNF579Q8NAF0 562 aaKnown RBP13.71□□□□□ -0.21
SVIP-204ENST00000530199 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.22
SVIP-204ENST00000530199 PEG3Q9GZU2 1588 aa13.69□□□□□ -0.22
SVIP-204ENST00000530199 PSEN1P49768 467 aa13.68□□□□□ -0.22
SVIP-204ENST00000530199 PAK3O75914 559 aaPredicted RBP13.66□□□□□ -0.22
SVIP-204ENST00000530199 ILDR1Q86SU0 546 aaPredicted RBP13.66□□□□□ -0.22
SVIP-204ENST00000530199 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
SVIP-204ENST00000530199 PIP4P2Q8N4L2 257 aa13.63□□□□□ -0.23
SVIP-204ENST00000530199 ARAP1Q96P48 1450 aa13.61□□□□□ -0.23
SVIP-204ENST00000530199 CEP164Q9UPV0 1460 aa13.61□□□□□ -0.23
SVIP-204ENST00000530199 IFNL1Q8IU54 200 aa13.61□□□□□ -0.23
SVIP-204ENST00000530199 MFRPQ9BY79 579 aa13.6□□□□□ -0.23
SVIP-204ENST00000530199 MAP3K13O43283 966 aa13.59□□□□□ -0.23
SVIP-204ENST00000530199 KIF12Q96FN5 646 aa13.59□□□□□ -0.23
SVIP-204ENST00000530199 CADPS2Q86UW7 1296 aa13.57□□□□□ -0.24
SVIP-204ENST00000530199 P3H3Q8IVL6 736 aa13.52□□□□□ -0.25
SVIP-204ENST00000530199 FANCD2Q9BXW9 1451 aa13.52□□□□□ -0.25
SVIP-204ENST00000530199 RSF1Q96T23 1441 aaPredicted RBP13.51□□□□□ -0.25
SVIP-204ENST00000530199 EFCAB3Q8N7B9 438 aa13.5□□□□□ -0.25
SVIP-204ENST00000530199 CABP2Q9NPB3 220 aa13.5□□□□□ -0.25
SVIP-204ENST00000530199 WDR70Q9NW82 654 aa13.49□□□□□ -0.25
SVIP-204ENST00000530199 ZRANB1Q9UGI0 708 aa13.49□□□□□ -0.25
SVIP-204ENST00000530199 SOX12O15370 315 aa13.48□□□□□ -0.25
SVIP-204ENST00000530199 FBXO22Q8NEZ5 403 aa13.48□□□□□ -0.25
SVIP-204ENST00000530199 NLRP6P59044 892 aa13.47□□□□□ -0.25
SVIP-204ENST00000530199 URB2Q14146 1524 aaKnown RBP13.46□□□□□ -0.25
SVIP-204ENST00000530199 PPP1R37O75864 691 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms