RNA–Protein interactions for RNA: ENST00000527492.5

LINC02546-201, Transcript of long intergenic non-protein coding RNA 2546, humanhuman

TSL 3

Gene LINC02546, Length 396 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02546-201ENST00000527492 AMER1Q5JTC6 1135 aaPredicted RBP7.86□□□□□ -1.15
LINC02546-201ENST00000527492 IFNLR1Q8IU57 520 aaPredicted RBP7.86□□□□□ -1.15
LINC02546-201ENST00000527492 KLHL34Q8N239 644 aa7.85□□□□□ -1.15
LINC02546-201ENST00000527492 PELP1Q8IZL8 1130 aaKnown RBP7.84□□□□□ -1.15
LINC02546-201ENST00000527492 PHF12Q96QT6 1004 aa7.84□□□□□ -1.15
LINC02546-201ENST00000527492 PCDH10Q9P2E7 1040 aa7.84□□□□□ -1.15
LINC02546-201ENST00000527492 PAK3O75914 559 aaPredicted RBP7.83□□□□□ -1.16
LINC02546-201ENST00000527492 ZBTB47Q9UFB7 747 aaPredicted RBP7.81□□□□□ -1.16
LINC02546-201ENST00000527492 RTN4Q9NQC3 1192 aaKnown RBP7.8□□□□□ -1.16
LINC02546-201ENST00000527492 ASTLQ6HA08 431 aaPredicted RBP7.78□□□□□ -1.16
LINC02546-201ENST00000527492 SPOCK2Q92563 424 aa7.78□□□□□ -1.16
LINC02546-201ENST00000527492 POTEJP0CG39 1038 aa7.77□□□□□ -1.17
LINC02546-201ENST00000527492 MNX1P50219 401 aaPredicted RBP7.77□□□□□ -1.17
LINC02546-201ENST00000527492 METRNQ9UJH8 293 aa7.77□□□□□ -1.17
LINC02546-201ENST00000527492 NPM1P06748 294 aaKnown RBP eCLIP7.76□□□□□ -1.17
LINC02546-201ENST00000527492 C7P10643 843 aa7.76□□□□□ -1.17
LINC02546-201ENST00000527492 SLC39A7Q92504 469 aa7.76□□□□□ -1.17
LINC02546-201ENST00000527492 ATMINO43313 823 aaPredicted RBP7.74□□□□□ -1.17
LINC02546-201ENST00000527492 MAMSTRQ6ZN01 415 aa7.74□□□□□ -1.17
LINC02546-201ENST00000527492 LCE2DQ5TA82 110 aaPredicted RBP7.73□□□□□ -1.17
LINC02546-201ENST00000527492 MS4A3Q96HJ5 214 aa7.73□□□□□ -1.17
LINC02546-201ENST00000527492 SCUBE2Q9NQ36 999 aa7.66□□□□□ -1.18
LINC02546-201ENST00000527492 CIZ1Q9ULV3 898 aaPredicted RBP7.66□□□□□ -1.18
LINC02546-201ENST00000527492 NUBP1P53384 320 aa7.65□□□□□ -1.18
LINC02546-201ENST00000527492 FAM163AQ96GL9 167 aaPredicted RBP7.65□□□□□ -1.18
LINC02546-201ENST00000527492 ATN1P54259 1190 aaPredicted RBP7.64□□□□□ -1.19
LINC02546-201ENST00000527492 PKD2Q13563 968 aa7.63□□□□□ -1.19
LINC02546-201ENST00000527492 GSE1Q14687 1217 aa7.63□□□□□ -1.19
LINC02546-201ENST00000527492 DCAF8Q5TAQ9 597 aa7.63□□□□□ -1.19
LINC02546-201ENST00000527492 POTEFA5A3E0 1075 aa7.62□□□□□ -1.19
LINC02546-201ENST00000527492 FAM212AQ96EL1 285 aa7.62□□□□□ -1.19
LINC02546-201ENST00000527492 CCDC61Q9Y6R9 512 aa7.61□□□□□ -1.19
LINC02546-201ENST00000527492 ECM2O94769 699 aaPredicted RBP7.6□□□□□ -1.19
LINC02546-201ENST00000527492 RASEFQ8IZ41 740 aa7.59□□□□□ -1.19
LINC02546-201ENST00000527492 KIF12Q96FN5 646 aa7.59□□□□□ -1.19
LINC02546-201ENST00000527492 BMP2KQ9NSY1 1161 aaPredicted RBP7.59□□□□□ -1.19
LINC02546-201ENST00000527492 TRIM41Q8WV44 630 aa7.58□□□□□ -1.2
LINC02546-201ENST00000527492 TSPYL2Q9H2G4 693 aaPredicted RBP7.58□□□□□ -1.2
LINC02546-201ENST00000527492 DCAF8L2P0C7V8 631 aa7.55□□□□□ -1.2
LINC02546-201ENST00000527492 TIE1P35590 1138 aa7.55□□□□□ -1.2
LINC02546-201ENST00000527492 TRPC6Q9Y210 931 aa7.54□□□□□ -1.2
LINC02546-201ENST00000527492 CDAN1Q8IWY9 1227 aa7.53□□□□□ -1.2
LINC02546-201ENST00000527492 MAP3K13O43283 966 aa7.51□□□□□ -1.21
LINC02546-201ENST00000527492 COLQQ9Y215 455 aaPredicted RBP7.51□□□□□ -1.21
LINC02546-201ENST00000527492 RGL2O15211 777 aa7.5□□□□□ -1.21
LINC02546-201ENST00000527492 PYGBP11216 843 aa7.5□□□□□ -1.21
LINC02546-201ENST00000527492 CHRM1P11229 460 aaPredicted RBP7.49□□□□□ -1.21
LINC02546-201ENST00000527492 TTLL13PA6NNM8 815 aa7.48□□□□□ -1.21
LINC02546-201ENST00000527492 SEC24BO95487 1268 aa7.48□□□□□ -1.21
LINC02546-201ENST00000527492 IER5LQ5T953 404 aa7.47□□□□□ -1.21
LINC02546-201ENST00000527492 TAOK2Q9UL54 1235 aa7.45□□□□□ -1.22
LINC02546-201ENST00000527492 ST18O60284 1047 aa7.44□□□□□ -1.22
LINC02546-201ENST00000527492 SGIP1Q9BQI5 828 aa7.44□□□□□ -1.22
LINC02546-201ENST00000527492 RIOK3O14730 519 aaKnown RBP7.43□□□□□ -1.22
LINC02546-201ENST00000527492 RNF25Q96BH1 459 aaPredicted RBP7.43□□□□□ -1.22
LINC02546-201ENST00000527492 TRIM35Q9UPQ4 493 aa7.42□□□□□ -1.22
LINC02546-201ENST00000527492 ZNF467Q7Z7K2 595 aaPredicted RBP7.41□□□□□ -1.22
LINC02546-201ENST00000527492 SLAIN1Q8ND83 568 aa7.41□□□□□ -1.22
LINC02546-201ENST00000527492 VGFO15240 615 aaPredicted RBP7.4□□□□□ -1.22
LINC02546-201ENST00000527492 CHGAP10645 457 aaKnown RBP7.39□□□□□ -1.23
LINC02546-201ENST00000527492 PCDHB13Q9Y5F0 798 aa7.39□□□□□ -1.23
LINC02546-201ENST00000527492 MMRN1Q13201 1228 aa7.38□□□□□ -1.23
LINC02546-201ENST00000527492 SPNS2Q8IVW8 549 aa7.37□□□□□ -1.23
LINC02546-201ENST00000527492 PCDHB8Q9UN66 801 aa7.37□□□□□ -1.23
LINC02546-201ENST00000527492 IFNL1Q8IU54 200 aa7.35□□□□□ -1.23
LINC02546-201ENST00000527492 TMEM121BQ9BXQ6 578 aaPredicted RBP7.35□□□□□ -1.23
LINC02546-201ENST00000527492 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.34□□□□□ -1.23
LINC02546-201ENST00000527492 STK25O00506 426 aa7.34□□□□□ -1.23
LINC02546-201ENST00000527492 PLCG2P16885 1265 aa7.34□□□□□ -1.23
LINC02546-201ENST00000527492 PDAP1Q13442 181 aaKnown RBP7.34□□□□□ -1.23
LINC02546-201ENST00000527492 HS6ST3Q8IZP7 471 aa7.34□□□□□ -1.23
LINC02546-201ENST00000527492 BBXQ8WY36 941 aaPredicted RBP7.34□□□□□ -1.23
LINC02546-201ENST00000527492 ZFP91Q96JP5 570 aaPredicted RBP7.34□□□□□ -1.23
LINC02546-201ENST00000527492 IRX5P78411 483 aaPredicted RBP7.33□□□□□ -1.24
LINC02546-201ENST00000527492 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.33□□□□□ -1.24
LINC02546-201ENST00000527492 TMEM106CQ9BVX2 250 aa7.32□□□□□ -1.24
LINC02546-201ENST00000527492 STK24Q9Y6E0 443 aa7.32□□□□□ -1.24
LINC02546-201ENST00000527492 PSEN1P49768 467 aa7.31□□□□□ -1.24
LINC02546-201ENST00000527492 BCL11BQ9C0K0 894 aaPredicted RBP7.31□□□□□ -1.24
LINC02546-201ENST00000527492 SNPHO15079 494 aa7.3□□□□□ -1.24
LINC02546-201ENST00000527492 PLCB2Q00722 1185 aa7.27□□□□□ -1.25
LINC02546-201ENST00000527492 DNAJC5Q9H3Z4 198 aa7.27□□□□□ -1.25
LINC02546-201ENST00000527492 OCEL1Q9H607 264 aa7.27□□□□□ -1.25
LINC02546-201ENST00000527492 PAXIP1Q6ZW49 1069 aaPredicted RBP7.25□□□□□ -1.25
LINC02546-201ENST00000527492 SPRYD3Q8NCJ5 442 aa7.25□□□□□ -1.25
LINC02546-201ENST00000527492 CFAP44Q96MT7 982 aa7.25□□□□□ -1.25
LINC02546-201ENST00000527492 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.25□□□□□ -1.25
LINC02546-201ENST00000527492 SLC24A1O60721 1099 aa7.24□□□□□ -1.25
LINC02546-201ENST00000527492 MARVELD3Q96A59 401 aa7.24□□□□□ -1.25
LINC02546-201ENST00000527492 GOLGA2Q08379 1002 aa7.23□□□□□ -1.25
LINC02546-201ENST00000527492 CABP2Q9NPB3 220 aa7.23□□□□□ -1.25
LINC02546-201ENST00000527492 NKX1-1Q15270 411 aaPredicted RBP7.21□□□□□ -1.26
LINC02546-201ENST00000527492 RYDENQ9NUL5 291 aaKnown RBP7.21□□□□□ -1.26
LINC02546-201ENST00000527492 HAP1P54257 671 aaPredicted RBP7.19□□□□□ -1.26
LINC02546-201ENST00000527492 EFCAB3Q8N7B9 438 aa7.19□□□□□ -1.26
LINC02546-201ENST00000527492 KRTAP3-3Q9BYR6 98 aa7.19□□□□□ -1.26
LINC02546-201ENST00000527492 KRTAP3-2Q9BYR7 98 aa7.19□□□□□ -1.26
LINC02546-201ENST00000527492 SOX12O15370 315 aa7.18□□□□□ -1.26
LINC02546-201ENST00000527492 MKRN3Q13064 507 aaKnown RBP7.18□□□□□ -1.26
LINC02546-201ENST00000527492 POTEB3A0JP26 581 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms