RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 CCDC136Q96JN2 1154 aa19.32■□□□□ 0.68
NCAPD3-203ENST00000525964 C14orf37Q86TY3 774 aa19.31■□□□□ 0.68
NCAPD3-203ENST00000525964 A0A0G2JS52 829 aa19.29■□□□□ 0.68
NCAPD3-203ENST00000525964 MYH16Q9H6N6 1097 aa19.27■□□□□ 0.68
NCAPD3-203ENST00000525964 CFDP1Q9UEE9 299 aaPredicted RBP19.27■□□□□ 0.67
NCAPD3-203ENST00000525964 ARID4BQ4LE39 1312 aaPredicted RBP19.26■□□□□ 0.67
NCAPD3-203ENST00000525964 CDCA8Q53HL2 280 aa19.24■□□□□ 0.67
NCAPD3-203ENST00000525964 GOLGA3Q08378 1498 aa19.22■□□□□ 0.67
NCAPD3-203ENST00000525964 ZBTB7CA1YPR0 619 aa19.22■□□□□ 0.67
NCAPD3-203ENST00000525964 RGL3Q3MIN7 710 aa19.21■□□□□ 0.67
NCAPD3-203ENST00000525964 KIF27Q86VH2 1401 aa19.21■□□□□ 0.67
NCAPD3-203ENST00000525964 BAZ1BQ9UIG0 1483 aaKnown RBP19.21■□□□□ 0.67
NCAPD3-203ENST00000525964 WRNQ14191 1432 aaPredicted RBP eCLIP19.2■□□□□ 0.66
NCAPD3-203ENST00000525964 CFAP53Q96M91 514 aa19.19■□□□□ 0.66
NCAPD3-203ENST00000525964 HAP1P54257 671 aaPredicted RBP19.18■□□□□ 0.66
NCAPD3-203ENST00000525964 PLEKHG5O94827 1062 aa19.16■□□□□ 0.66
NCAPD3-203ENST00000525964 SENP3Q9H4L4 574 aaPredicted RBP19.16■□□□□ 0.66
NCAPD3-203ENST00000525964 NACADO15069 1562 aa19.13■□□□□ 0.65
NCAPD3-203ENST00000525964 HIRIP3Q9BW71 556 aaPredicted RBP19.13■□□□□ 0.65
NCAPD3-203ENST00000525964 KNSTRNQ9Y448 316 aa19.11■□□□□ 0.65
NCAPD3-203ENST00000525964 ERCC6Q03468 1493 aa19.11■□□□□ 0.65
NCAPD3-203ENST00000525964 CEP162Q5TB80 1403 aa19.11■□□□□ 0.65
NCAPD3-203ENST00000525964 CARD11Q9BXL7 1154 aa19.06■□□□□ 0.64
NCAPD3-203ENST00000525964 CEP164Q9UPV0 1460 aa19.04■□□□□ 0.64
NCAPD3-203ENST00000525964 POGKQ9P215 609 aa19.04■□□□□ 0.64
NCAPD3-203ENST00000525964 PPM1GO15355 546 aaPredicted RBP19.03■□□□□ 0.64
NCAPD3-203ENST00000525964 TNIKQ9UKE5 1360 aa19.02■□□□□ 0.64
NCAPD3-203ENST00000525964 NUDCQ9Y266 331 aa19.01■□□□□ 0.63
NCAPD3-203ENST00000525964 MIER1Q8N108 512 aa19■□□□□ 0.63
NCAPD3-203ENST00000525964 MAPK8IP3Q9UPT6 1336 aa18.98■□□□□ 0.63
NCAPD3-203ENST00000525964 CDK11BP21127 795 aaKnown RBP18.97■□□□□ 0.63
NCAPD3-203ENST00000525964 ARXQ96QS3 562 aa18.97■□□□□ 0.63
NCAPD3-203ENST00000525964 LMOD2Q6P5Q4 547 aa18.97■□□□□ 0.63
NCAPD3-203ENST00000525964 CCNB3Q8WWL7 1395 aa18.96■□□□□ 0.63
NCAPD3-203ENST00000525964 HDGFP51858 240 aaKnown RBP18.96■□□□□ 0.63
NCAPD3-203ENST00000525964 IRX6P78412 446 aaPredicted RBP18.94■□□□□ 0.62
NCAPD3-203ENST00000525964 BECN1Q14457 450 aa18.94■□□□□ 0.62
NCAPD3-203ENST00000525964 FHAD1B1AJZ9 1412 aa18.93■□□□□ 0.62
NCAPD3-203ENST00000525964 EIF5BO60841 1220 aaKnown RBP18.93■□□□□ 0.62
NCAPD3-203ENST00000525964 NCLP19338 710 aaKnown RBP18.91■□□□□ 0.62
NCAPD3-203ENST00000525964 FTSJ3Q8IY81 847 aaKnown RBP18.91■□□□□ 0.62
NCAPD3-203ENST00000525964 KANK1Q14678 1352 aa18.91■□□□□ 0.62
NCAPD3-203ENST00000525964 BAZ1AQ9NRL2 1556 aaPredicted RBP18.9■□□□□ 0.62
NCAPD3-203ENST00000525964 TRHP20396 242 aaPredicted RBP18.9■□□□□ 0.62
NCAPD3-203ENST00000525964 NEUROD2Q15784 382 aa18.88■□□□□ 0.61
NCAPD3-203ENST00000525964 DDRGK1Q96HY6 314 aa18.88■□□□□ 0.61
NCAPD3-203ENST00000525964 CARMIL1Q5VZK9 1371 aa18.88■□□□□ 0.61
NCAPD3-203ENST00000525964 CASC1Q6TDU7 716 aa18.87■□□□□ 0.61
NCAPD3-203ENST00000525964 GOLGA6L22H0YM25 854 aa18.87■□□□□ 0.61
NCAPD3-203ENST00000525964 CHMP4BQ9H444 224 aaKnown RBP18.87■□□□□ 0.61
NCAPD3-203ENST00000525964 PNNQ9H307 717 aaKnown RBP18.86■□□□□ 0.61
NCAPD3-203ENST00000525964 ANP32EQ9BTT0 268 aa18.85■□□□□ 0.61
NCAPD3-203ENST00000525964 NBR1Q14596 966 aa18.85■□□□□ 0.61
NCAPD3-203ENST00000525964 LAS1LQ9Y4W2 734 aaKnown RBP18.85■□□□□ 0.61
NCAPD3-203ENST00000525964 TMF1P82094 1093 aa18.82■□□□□ 0.6
NCAPD3-203ENST00000525964 MS4A1P11836 297 aa18.81■□□□□ 0.6
NCAPD3-203ENST00000525964 CUX2O14529 1486 aa18.81■□□□□ 0.6
NCAPD3-203ENST00000525964 NPHP1O15259 732 aa18.81■□□□□ 0.6
NCAPD3-203ENST00000525964 MLECQ14165 292 aa18.81■□□□□ 0.6
NCAPD3-203ENST00000525964 U2SURPO15042 1029 aaKnown RBP18.8■□□□□ 0.6
NCAPD3-203ENST00000525964 DCAF11Q8TEB1 546 aa18.79■□□□□ 0.6
NCAPD3-203ENST00000525964 SIN3AQ96ST3 1273 aa18.79■□□□□ 0.6
NCAPD3-203ENST00000525964 TNNT2P45379 298 aaPredicted RBP18.78■□□□□ 0.6
NCAPD3-203ENST00000525964 ZRSR1Q15695 479 aaKnown RBP18.78■□□□□ 0.6
NCAPD3-203ENST00000525964 TIMELESSQ9UNS1 1208 aa18.77■□□□□ 0.6
NCAPD3-203ENST00000525964 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
NCAPD3-203ENST00000525964 CARMIL2Q6F5E8 1435 aa18.75■□□□□ 0.59
NCAPD3-203ENST00000525964 SRPK2P78362 688 aaKnown RBP18.75■□□□□ 0.59
NCAPD3-203ENST00000525964 SENP3-EIF4A1A0A087X0R7 540 aa18.74■□□□□ 0.59
NCAPD3-203ENST00000525964 GGT6Q6P531 493 aa18.74■□□□□ 0.59
NCAPD3-203ENST00000525964 FRAT1Q92837 279 aaPredicted RBP18.73■□□□□ 0.59
NCAPD3-203ENST00000525964 CC2D1BQ5T0F9 858 aaKnown RBP18.73■□□□□ 0.59
NCAPD3-203ENST00000525964 OS9Q13438 667 aaPredicted RBP18.71■□□□□ 0.59
NCAPD3-203ENST00000525964 SUPT16HQ9Y5B9 1047 aaKnown RBP18.71■□□□□ 0.59
NCAPD3-203ENST00000525964 PDS5BQ9NTI5 1447 aa18.71■□□□□ 0.59
NCAPD3-203ENST00000525964 TRIM44Q96DX7 344 aaPredicted RBP18.69■□□□□ 0.58
NCAPD3-203ENST00000525964 EFCAB2Q5VUJ9 269 aa18.69■□□□□ 0.58
NCAPD3-203ENST00000525964 CECR2Q9BXF3 1484 aa18.68■□□□□ 0.58
NCAPD3-203ENST00000525964 GLIPR1L2Q4G1C9 344 aa18.68■□□□□ 0.58
NCAPD3-203ENST00000525964 MORC1Q86VD1 984 aa18.67■□□□□ 0.58
NCAPD3-203ENST00000525964 GOLGA2Q08379 1002 aa18.65■□□□□ 0.58
NCAPD3-203ENST00000525964 MYO15BQ96JP2 1530 aa18.65■□□□□ 0.58
NCAPD3-203ENST00000525964 FGD1P98174 961 aa18.65■□□□□ 0.58
NCAPD3-203ENST00000525964 SOX12O15370 315 aa18.64■□□□□ 0.58
NCAPD3-203ENST00000525964 HDGFL2Q7Z4V5 671 aaPredicted RBP18.63■□□□□ 0.57
NCAPD3-203ENST00000525964 PKD2Q13563 968 aa18.63■□□□□ 0.57
NCAPD3-203ENST00000525964 SAFB2Q14151 953 aaKnown RBP eCLIP18.63■□□□□ 0.57
NCAPD3-203ENST00000525964 RGS3P49796 1198 aa18.63■□□□□ 0.57
NCAPD3-203ENST00000525964 PPP4R2Q9NY27 417 aa18.63■□□□□ 0.57
NCAPD3-203ENST00000525964 KCNJ4P48050 445 aa18.62■□□□□ 0.57
NCAPD3-203ENST00000525964 RTF1Q92541 710 aaKnown RBP18.61■□□□□ 0.57
NCAPD3-203ENST00000525964 ARHGAP35Q9NRY4 1499 aa18.6■□□□□ 0.57
NCAPD3-203ENST00000525964 SOGA1O94964 1423 aa18.59■□□□□ 0.57
NCAPD3-203ENST00000525964 STK26Q9P289 416 aa18.59■□□□□ 0.57
NCAPD3-203ENST00000525964 PTMAP06454 111 aaKnown RBP18.59■□□□□ 0.57
NCAPD3-203ENST00000525964 SETD5Q9C0A6 1442 aa18.58■□□□□ 0.56
NCAPD3-203ENST00000525964 FMN1Q68DA7 1419 aa18.57■□□□□ 0.56
NCAPD3-203ENST00000525964 TDRD9Q8NDG6 1382 aaKnown RBP18.56■□□□□ 0.56
NCAPD3-203ENST00000525964 VPS8Q8N3P4 1428 aa18.55■□□□□ 0.56
NCAPD3-203ENST00000525964 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms