RNA–Protein interactions for RNA: ENST00000525821.1

CTNND1-211, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-211ENST00000525821 ZNF579Q8NAF0 562 aaKnown RBP16.28■□□□□ 0.2
CTNND1-211ENST00000525821 CCDC61Q9Y6R9 512 aa16.28■□□□□ 0.2
CTNND1-211ENST00000525821 SP7Q8TDD2 431 aaPredicted RBP16.26■□□□□ 0.19
CTNND1-211ENST00000525821 CIZ1Q9ULV3 898 aaPredicted RBP16.25■□□□□ 0.19
CTNND1-211ENST00000525821 PHF12Q96QT6 1004 aa16.22■□□□□ 0.19
CTNND1-211ENST00000525821 CLCN6P51797 869 aa16.18■□□□□ 0.18
CTNND1-211ENST00000525821 GABBR2O75899 941 aa16.14■□□□□ 0.17
CTNND1-211ENST00000525821 KIF12Q96FN5 646 aa16.14■□□□□ 0.17
CTNND1-211ENST00000525821 PYGBP11216 843 aa16.12■□□□□ 0.17
CTNND1-211ENST00000525821 MAP3K13O43283 966 aa16.09■□□□□ 0.17
CTNND1-211ENST00000525821 CHRM1P11229 460 aaPredicted RBP16.09■□□□□ 0.17
CTNND1-211ENST00000525821 TRIM41Q8WV44 630 aa16.08■□□□□ 0.16
CTNND1-211ENST00000525821 GALR2O43603 387 aaPredicted RBP16.04■□□□□ 0.16
CTNND1-211ENST00000525821 SGIP1Q9BQI5 828 aa16.04■□□□□ 0.16
CTNND1-211ENST00000525821 PKD2Q13563 968 aa16.03■□□□□ 0.16
CTNND1-211ENST00000525821 MS4A3Q96HJ5 214 aa16.03■□□□□ 0.16
CTNND1-211ENST00000525821 PCDHB13Q9Y5F0 798 aa16.03■□□□□ 0.16
CTNND1-211ENST00000525821 ECM2O94769 699 aaPredicted RBP15.96■□□□□ 0.15
CTNND1-211ENST00000525821 IFNL1Q8IU54 200 aa15.96■□□□□ 0.15
CTNND1-211ENST00000525821 ZNF467Q7Z7K2 595 aaPredicted RBP15.92■□□□□ 0.14
CTNND1-211ENST00000525821 PCDHB8Q9UN66 801 aa15.92■□□□□ 0.14
CTNND1-211ENST00000525821 AMER1Q5JTC6 1135 aaPredicted RBP15.9■□□□□ 0.14
CTNND1-211ENST00000525821 DCBLD2Q96PD2 775 aa15.87■□□□□ 0.13
CTNND1-211ENST00000525821 TRPC6Q9Y210 931 aa15.86■□□□□ 0.13
CTNND1-211ENST00000525821 RNF25Q96BH1 459 aaPredicted RBP15.84■□□□□ 0.13
CTNND1-211ENST00000525821 RTN4Q9NQC3 1192 aaKnown RBP15.83■□□□□ 0.12
CTNND1-211ENST00000525821 RIOK3O14730 519 aaKnown RBP15.82■□□□□ 0.12
CTNND1-211ENST00000525821 TIE1P35590 1138 aa15.81■□□□□ 0.12
CTNND1-211ENST00000525821 RGL2O15211 777 aa15.8■□□□□ 0.12
CTNND1-211ENST00000525821 POTEIP0CG38 1075 aa15.79■□□□□ 0.12
CTNND1-211ENST00000525821 BMP2KQ9NSY1 1161 aaPredicted RBP15.78■□□□□ 0.12
CTNND1-211ENST00000525821 PDAP1Q13442 181 aaKnown RBP15.76■□□□□ 0.11
CTNND1-211ENST00000525821 ATMINO43313 823 aaPredicted RBP15.75■□□□□ 0.11
CTNND1-211ENST00000525821 PSEN1P49768 467 aa15.75■□□□□ 0.11
CTNND1-211ENST00000525821 ASTLQ6HA08 431 aaPredicted RBP15.75■□□□□ 0.11
CTNND1-211ENST00000525821 TMEM106CQ9BVX2 250 aa15.75■□□□□ 0.11
CTNND1-211ENST00000525821 TTLL13PA6NNM8 815 aa15.74■□□□□ 0.11
CTNND1-211ENST00000525821 VGFO15240 615 aaPredicted RBP15.73■□□□□ 0.11
CTNND1-211ENST00000525821 TAOK2Q9UL54 1235 aa15.73■□□□□ 0.11
CTNND1-211ENST00000525821 ATN1P54259 1190 aaPredicted RBP15.7■□□□□ 0.1
CTNND1-211ENST00000525821 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.66■□□□□ 0.1
CTNND1-211ENST00000525821 PELP1Q8IZL8 1130 aaKnown RBP15.66■□□□□ 0.1
CTNND1-211ENST00000525821 ZFP91Q96JP5 570 aaPredicted RBP15.66■□□□□ 0.1
CTNND1-211ENST00000525821 TRIM35Q9UPQ4 493 aa15.64■□□□□ 0.09
CTNND1-211ENST00000525821 SLC39A7Q92504 469 aa15.57■□□□□ 0.08
CTNND1-211ENST00000525821 STK25O00506 426 aa15.56■□□□□ 0.08
CTNND1-211ENST00000525821 GOLGA2Q08379 1002 aa15.56■□□□□ 0.08
CTNND1-211ENST00000525821 BCL11BQ9C0K0 894 aaPredicted RBP15.56■□□□□ 0.08
CTNND1-211ENST00000525821 CABP2Q9NPB3 220 aa15.56■□□□□ 0.08
CTNND1-211ENST00000525821 DCAF8L2P0C7V8 631 aa15.55■□□□□ 0.08
CTNND1-211ENST00000525821 C7P10643 843 aa15.54■□□□□ 0.08
CTNND1-211ENST00000525821 STK24Q9Y6E0 443 aa15.53■□□□□ 0.08
CTNND1-211ENST00000525821 IER5LQ5T953 404 aa15.52■□□□□ 0.08
CTNND1-211ENST00000525821 MKRN3Q13064 507 aaKnown RBP15.51■□□□□ 0.07
CTNND1-211ENST00000525821 METRNQ9UJH8 293 aa15.51■□□□□ 0.07
CTNND1-211ENST00000525821 CHGAP10645 457 aaKnown RBP15.5■□□□□ 0.07
CTNND1-211ENST00000525821 HS6ST3Q8IZP7 471 aa15.47■□□□□ 0.07
CTNND1-211ENST00000525821 EFCAB3Q8N7B9 438 aa15.45■□□□□ 0.06
CTNND1-211ENST00000525821 SEC24BO95487 1268 aa15.43■□□□□ 0.06
CTNND1-211ENST00000525821 NISCHQ9Y2I1 1504 aa15.43■□□□□ 0.06
CTNND1-211ENST00000525821 IRX5P78411 483 aaPredicted RBP15.42■□□□□ 0.06
CTNND1-211ENST00000525821 COLQQ9Y215 455 aaPredicted RBP15.4■□□□□ 0.06
CTNND1-211ENST00000525821 POTEFA5A3E0 1075 aa15.39■□□□□ 0.05
CTNND1-211ENST00000525821 OCEL1Q9H607 264 aa15.39■□□□□ 0.05
CTNND1-211ENST00000525821 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.39■□□□□ 0.05
CTNND1-211ENST00000525821 SOX12O15370 315 aa15.38■□□□□ 0.05
CTNND1-211ENST00000525821 PLCG2P16885 1265 aa15.37■□□□□ 0.05
CTNND1-211ENST00000525821 ILDR1Q86SU0 546 aaPredicted RBP15.34■□□□□ 0.05
CTNND1-211ENST00000525821 DNAJC5Q9H3Z4 198 aa15.34■□□□□ 0.05
CTNND1-211ENST00000525821 PDCD7Q8N8D1 485 aaKnown RBP15.31■□□□□ 0.04
CTNND1-211ENST00000525821 PHF8Q9UPP1 1060 aa15.31■□□□□ 0.04
CTNND1-211ENST00000525821 POTEB2H3BUK9 544 aa15.29■□□□□ 0.04
CTNND1-211ENST00000525821 NLRP6P59044 892 aa15.29■□□□□ 0.04
CTNND1-211ENST00000525821 MFRPQ9BY79 579 aa15.29■□□□□ 0.04
CTNND1-211ENST00000525821 LHX8Q68G74 356 aa15.28■□□□□ 0.04
CTNND1-211ENST00000525821 FBXO22Q8NEZ5 403 aa15.25■□□□□ 0.03
CTNND1-211ENST00000525821 NKX1-1Q15270 411 aaPredicted RBP15.24■□□□□ 0.03
CTNND1-211ENST00000525821 DPY19L2Q6NUT2 758 aa15.24■□□□□ 0.03
CTNND1-211ENST00000525821 MS4A4AQ96JQ5 239 aa15.23■□□□□ 0.03
CTNND1-211ENST00000525821 BBXQ8WY36 941 aaPredicted RBP15.21■□□□□ 0.03
CTNND1-211ENST00000525821 POTEJP0CG39 1038 aa15.19■□□□□ 0.02
CTNND1-211ENST00000525821 L3MBTL3Q96JM7 780 aaPredicted RBP15.19■□□□□ 0.02
CTNND1-211ENST00000525821 RYDENQ9NUL5 291 aaKnown RBP15.16■□□□□ 0.02
CTNND1-211ENST00000525821 MAMSTRQ6ZN01 415 aa15.13■□□□□ 0.01
CTNND1-211ENST00000525821 G3V3G9 751 aa15.12■□□□□ 0.01
CTNND1-211ENST00000525821 GTPBP6O43824 516 aaPredicted RBP15.12■□□□□ 0.01
CTNND1-211ENST00000525821 BOLA1Q9Y3E2 137 aa15.12■□□□□ 0.01
CTNND1-211ENST00000525821 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.11■□□□□ 0.01
CTNND1-211ENST00000525821 SCUBE2Q9NQ36 999 aa15.09■□□□□ 0.01
CTNND1-211ENST00000525821 PPP1R37O75864 691 aa15.07■□□□□ 0
CTNND1-211ENST00000525821 OTUD5Q96G74 571 aa15.07■□□□□ 0
CTNND1-211ENST00000525821 TMEM121BQ9BXQ6 578 aaPredicted RBP15.06■□□□□ 0
CTNND1-211ENST00000525821 MICALL2Q8IY33 904 aa15.05■□□□□ -0
CTNND1-211ENST00000525821 C3orf67Q6ZVT6 689 aa15.03■□□□□ -0
CTNND1-211ENST00000525821 SPRYD3Q8NCJ5 442 aa15.02■□□□□ -0
CTNND1-211ENST00000525821 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.02■□□□□ -0
CTNND1-211ENST00000525821 PAXIP1Q6ZW49 1069 aaPredicted RBP14.98□□□□□ -0.01
CTNND1-211ENST00000525821 CFAP44Q96MT7 982 aa14.96□□□□□ -0.01
CTNND1-211ENST00000525821 SLAIN1Q8ND83 568 aa14.94□□□□□ -0.02
CTNND1-211ENST00000525821 TMEM92Q6UXU6 159 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms