RNA–Protein interactions for RNA: ENST00000525231.5

VAV3-208, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene VAV3, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-208ENST00000525231 PHF12Q96QT6 1004 aa8.76□□□□□ -1.01
VAV3-208ENST00000525231 FAM163AQ96GL9 167 aaPredicted RBP8.75□□□□□ -1.01
VAV3-208ENST00000525231 NISCHQ9Y2I1 1504 aa8.75□□□□□ -1.01
VAV3-208ENST00000525231 NPM1P06748 294 aaKnown RBP eCLIP8.73□□□□□ -1.01
VAV3-208ENST00000525231 ATMINO43313 823 aaPredicted RBP8.72□□□□□ -1.01
VAV3-208ENST00000525231 POTEJP0CG39 1038 aa8.72□□□□□ -1.01
VAV3-208ENST00000525231 MS4A3Q96HJ5 214 aa8.66□□□□□ -1.02
VAV3-208ENST00000525231 CDAN1Q8IWY9 1227 aa8.65□□□□□ -1.02
VAV3-208ENST00000525231 MNX1P50219 401 aaPredicted RBP8.57□□□□□ -1.04
VAV3-208ENST00000525231 ATN1P54259 1190 aaPredicted RBP8.56□□□□□ -1.04
VAV3-208ENST00000525231 POTEFA5A3E0 1075 aa8.5□□□□□ -1.05
VAV3-208ENST00000525231 MMRN1Q13201 1228 aa8.5□□□□□ -1.05
VAV3-208ENST00000525231 TIE1P35590 1138 aa8.49□□□□□ -1.05
VAV3-208ENST00000525231 BMP2KQ9NSY1 1161 aaPredicted RBP8.48□□□□□ -1.05
VAV3-208ENST00000525231 SEC24BO95487 1268 aa8.47□□□□□ -1.05
VAV3-208ENST00000525231 CCDC61Q9Y6R9 512 aa8.47□□□□□ -1.05
VAV3-208ENST00000525231 SPNS2Q8IVW8 549 aa8.45□□□□□ -1.06
VAV3-208ENST00000525231 KIF12Q96FN5 646 aa8.45□□□□□ -1.06
VAV3-208ENST00000525231 ST18O60284 1047 aa8.44□□□□□ -1.06
VAV3-208ENST00000525231 IER5LQ5T953 404 aa8.44□□□□□ -1.06
VAV3-208ENST00000525231 TMEM121BQ9BXQ6 578 aaPredicted RBP8.44□□□□□ -1.06
VAV3-208ENST00000525231 TSPYL2Q9H2G4 693 aaPredicted RBP8.44□□□□□ -1.06
VAV3-208ENST00000525231 SPDYE4A6NLX3 237 aa8.42□□□□□ -1.06
VAV3-208ENST00000525231 SLAIN1Q8ND83 568 aa8.4□□□□□ -1.06
VAV3-208ENST00000525231 COLQQ9Y215 455 aaPredicted RBP8.4□□□□□ -1.06
VAV3-208ENST00000525231 TTLL13PA6NNM8 815 aa8.37□□□□□ -1.07
VAV3-208ENST00000525231 CSRNP3Q8WYN3 585 aa8.35□□□□□ -1.07
VAV3-208ENST00000525231 TRPC6Q9Y210 931 aa8.35□□□□□ -1.07
VAV3-208ENST00000525231 SNPHO15079 494 aa8.34□□□□□ -1.07
VAV3-208ENST00000525231 MAP3K13O43283 966 aa8.34□□□□□ -1.07
VAV3-208ENST00000525231 SGIP1Q9BQI5 828 aa8.32□□□□□ -1.08
VAV3-208ENST00000525231 TRIM35Q9UPQ4 493 aa8.32□□□□□ -1.08
VAV3-208ENST00000525231 PLEKHG5O94827 1062 aa8.27□□□□□ -1.09
VAV3-208ENST00000525231 PLCG2P16885 1265 aa8.27□□□□□ -1.09
VAV3-208ENST00000525231 EHMT2Q96KQ7 1210 aa8.21□□□□□ -1.1
VAV3-208ENST00000525231 PCDHB13Q9Y5F0 798 aa8.21□□□□□ -1.1
VAV3-208ENST00000525231 MARVELD3Q96A59 401 aa8.2□□□□□ -1.1
VAV3-208ENST00000525231 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.2□□□□□ -1.1
VAV3-208ENST00000525231 RASEFQ8IZ41 740 aa8.19□□□□□ -1.1
VAV3-208ENST00000525231 IRX5P78411 483 aaPredicted RBP8.18□□□□□ -1.1
VAV3-208ENST00000525231 EMP3P54852 163 aa8.17□□□□□ -1.1
VAV3-208ENST00000525231 TMEM106CQ9BVX2 250 aa8.16□□□□□ -1.1
VAV3-208ENST00000525231 OCEL1Q9H607 264 aa8.16□□□□□ -1.1
VAV3-208ENST00000525231 PROM2Q8N271 834 aa8.15□□□□□ -1.1
VAV3-208ENST00000525231 KRTAP3-3Q9BYR6 98 aa8.14□□□□□ -1.11
VAV3-208ENST00000525231 KRTAP3-2Q9BYR7 98 aa8.14□□□□□ -1.11
VAV3-208ENST00000525231 IFNL1Q8IU54 200 aa8.11□□□□□ -1.11
VAV3-208ENST00000525231 HS3ST6Q96QI5 342 aa8.11□□□□□ -1.11
VAV3-208ENST00000525231 MIER1Q8N108 512 aa8.1□□□□□ -1.11
VAV3-208ENST00000525231 ZBTB47Q9UFB7 747 aaPredicted RBP8.09□□□□□ -1.11
VAV3-208ENST00000525231 C3orf67Q6ZVT6 689 aa8.07□□□□□ -1.12
VAV3-208ENST00000525231 FAM205CA6NFA0 338 aa8.06□□□□□ -1.12
VAV3-208ENST00000525231 FAM212AQ96EL1 285 aa8.03□□□□□ -1.12
VAV3-208ENST00000525231 RNF166Q96A37 237 aaPredicted RBP8.02□□□□□ -1.13
VAV3-208ENST00000525231 L3MBTL3Q96JM7 780 aaPredicted RBP8.02□□□□□ -1.13
VAV3-208ENST00000525231 POTEB3A0JP26 581 aa8.01□□□□□ -1.13
VAV3-208ENST00000525231 POTEBQ6S5H4 581 aa8.01□□□□□ -1.13
VAV3-208ENST00000525231 NUBP1P53384 320 aa7.99□□□□□ -1.13
VAV3-208ENST00000525231 PLCD3Q8N3E9 789 aa7.98□□□□□ -1.13
VAV3-208ENST00000525231 PDCD7Q8N8D1 485 aaKnown RBP7.95□□□□□ -1.14
VAV3-208ENST00000525231 MYT1LQ9UL68 1186 aa7.94□□□□□ -1.14
VAV3-208ENST00000525231 PTGER2P43116 358 aa7.93□□□□□ -1.14
VAV3-208ENST00000525231 GOLGA2Q08379 1002 aa7.9□□□□□ -1.14
VAV3-208ENST00000525231 MKRN3Q13064 507 aaKnown RBP7.9□□□□□ -1.14
VAV3-208ENST00000525231 HOXB1P14653 301 aaPredicted RBP7.89□□□□□ -1.15
VAV3-208ENST00000525231 ERBB3P21860 1342 aa7.88□□□□□ -1.15
VAV3-208ENST00000525231 ZNF710Q8N1W2 664 aa7.87□□□□□ -1.15
VAV3-208ENST00000525231 DOK7Q18PE1 504 aa7.86□□□□□ -1.15
VAV3-208ENST00000525231 RIMBP2O15034 1052 aa7.84□□□□□ -1.15
VAV3-208ENST00000525231 HOXB3P14651 431 aaPredicted RBP7.84□□□□□ -1.15
VAV3-208ENST00000525231 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.84□□□□□ -1.15
VAV3-208ENST00000525231 ZNF467Q7Z7K2 595 aaPredicted RBP7.83□□□□□ -1.16
VAV3-208ENST00000525231 G3V3G9 751 aa7.82□□□□□ -1.16
VAV3-208ENST00000525231 PYGBP11216 843 aa7.82□□□□□ -1.16
VAV3-208ENST00000525231 DCAF8Q5TAQ9 597 aa7.82□□□□□ -1.16
VAV3-208ENST00000525231 PCDHB8Q9UN66 801 aa7.82□□□□□ -1.16
VAV3-208ENST00000525231 ILDR1Q86SU0 546 aaPredicted RBP7.8□□□□□ -1.16
VAV3-208ENST00000525231 VARS2Q5ST30 1063 aaKnown RBP7.79□□□□□ -1.16
VAV3-208ENST00000525231 ZNF687Q8N1G0 1237 aa7.79□□□□□ -1.16
VAV3-208ENST00000525231 ZSWIM6Q9HCJ5 1215 aa7.77□□□□□ -1.17
VAV3-208ENST00000525231 BOLA1Q9Y3E2 137 aa7.75□□□□□ -1.17
VAV3-208ENST00000525231 PSEN1P49768 467 aa7.7□□□□□ -1.18
VAV3-208ENST00000525231 PLA2G2EQ9NZK7 142 aa7.7□□□□□ -1.18
VAV3-208ENST00000525231 GSE1Q14687 1217 aa7.69□□□□□ -1.18
VAV3-208ENST00000525231 SUPT5HO00267 1087 aaKnown RBP7.68□□□□□ -1.18
VAV3-208ENST00000525231 CHRM1P11229 460 aaPredicted RBP7.68□□□□□ -1.18
VAV3-208ENST00000525231 PDAP1Q13442 181 aaKnown RBP7.66□□□□□ -1.18
VAV3-208ENST00000525231 DPY19L2Q6NUT2 758 aa7.66□□□□□ -1.18
VAV3-208ENST00000525231 HRCP23327 699 aa7.65□□□□□ -1.18
VAV3-208ENST00000525231 ANKRD13DQ6ZTN6 518 aa7.65□□□□□ -1.18
VAV3-208ENST00000525231 HCSTQ9UBK5 93 aa7.65□□□□□ -1.18
VAV3-208ENST00000525231 SHROOM4Q9ULL8 1493 aa7.64□□□□□ -1.19
VAV3-208ENST00000525231 LSM11P83369 360 aaKnown RBP eCLIP7.64□□□□□ -1.19
VAV3-208ENST00000525231 GPR153Q6NV75 609 aa7.63□□□□□ -1.19
VAV3-208ENST00000525231 PBX2P40425 430 aa7.6□□□□□ -1.19
VAV3-208ENST00000525231 CABP2Q9NPB3 220 aa7.59□□□□□ -1.19
VAV3-208ENST00000525231 RGS20O76081 388 aa7.56□□□□□ -1.2
VAV3-208ENST00000525231 ZNF316A6NFI3 1004 aaPredicted RBP7.55□□□□□ -1.2
VAV3-208ENST00000525231 PCGF6Q9BYE7 350 aa7.52□□□□□ -1.21
VAV3-208ENST00000525231 FBXO3Q9UK99 471 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms