RNA–Protein interactions for RNA: ENST00000523702.5

CPS1-211, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-211ENST00000523702 FAM212AQ96EL1 285 aa13.68□□□□□ -0.22
CPS1-211ENST00000523702 PAXIP1Q6ZW49 1069 aaPredicted RBP13.67□□□□□ -0.22
CPS1-211ENST00000523702 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.65□□□□□ -0.22
CPS1-211ENST00000523702 CFAP44Q96MT7 982 aa13.64□□□□□ -0.23
CPS1-211ENST00000523702 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
CPS1-211ENST00000523702 PYGBP11216 843 aa13.6□□□□□ -0.23
CPS1-211ENST00000523702 CHRM1P11229 460 aaPredicted RBP13.6□□□□□ -0.23
CPS1-211ENST00000523702 RIOK3O14730 519 aaKnown RBP13.59□□□□□ -0.23
CPS1-211ENST00000523702 PRKAR2AP13861 404 aaKnown RBP13.59□□□□□ -0.23
CPS1-211ENST00000523702 FXR2P51116 673 aaKnown RBP eCLIP13.59□□□□□ -0.23
CPS1-211ENST00000523702 HS6ST3Q8IZP7 471 aa13.57□□□□□ -0.24
CPS1-211ENST00000523702 TSPYL2Q9H2G4 693 aaPredicted RBP13.56□□□□□ -0.24
CPS1-211ENST00000523702 SPRYD3Q8NCJ5 442 aa13.55□□□□□ -0.24
CPS1-211ENST00000523702 KDM2AQ9Y2K7 1162 aa13.52□□□□□ -0.25
CPS1-211ENST00000523702 NKX1-1Q15270 411 aaPredicted RBP13.51□□□□□ -0.25
CPS1-211ENST00000523702 CHRDL2Q6WN34 429 aa13.51□□□□□ -0.25
CPS1-211ENST00000523702 TSHZ2Q9NRE2 1034 aa13.5□□□□□ -0.25
CPS1-211ENST00000523702 PIP4P2Q8N4L2 257 aa13.49□□□□□ -0.25
CPS1-211ENST00000523702 VGFO15240 615 aaPredicted RBP13.48□□□□□ -0.25
CPS1-211ENST00000523702 VSIG10Q8N0Z9 540 aa13.48□□□□□ -0.25
CPS1-211ENST00000523702 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.46□□□□□ -0.25
CPS1-211ENST00000523702 ZFP91Q96JP5 570 aaPredicted RBP13.46□□□□□ -0.25
CPS1-211ENST00000523702 DNAJC5Q9H3Z4 198 aa13.46□□□□□ -0.25
CPS1-211ENST00000523702 STK25O00506 426 aa13.45□□□□□ -0.26
CPS1-211ENST00000523702 SGIP1Q9BQI5 828 aa13.42□□□□□ -0.26
CPS1-211ENST00000523702 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
CPS1-211ENST00000523702 TAOK2Q9UL54 1235 aa13.41□□□□□ -0.26
CPS1-211ENST00000523702 BCL11BQ9C0K0 894 aaPredicted RBP13.4□□□□□ -0.26
CPS1-211ENST00000523702 GTPBP6O43824 516 aaPredicted RBP13.39□□□□□ -0.27
CPS1-211ENST00000523702 PCDHB8Q9UN66 801 aa13.39□□□□□ -0.27
CPS1-211ENST00000523702 PCDHB13Q9Y5F0 798 aa13.39□□□□□ -0.27
CPS1-211ENST00000523702 STK24Q9Y6E0 443 aa13.39□□□□□ -0.27
CPS1-211ENST00000523702 ZNF467Q7Z7K2 595 aaPredicted RBP13.3□□□□□ -0.28
CPS1-211ENST00000523702 MAP3K13O43283 966 aa13.28□□□□□ -0.28
CPS1-211ENST00000523702 IFNL1Q8IU54 200 aa13.26□□□□□ -0.29
CPS1-211ENST00000523702 KIF12Q96FN5 646 aa13.26□□□□□ -0.29
CPS1-211ENST00000523702 PDAP1Q13442 181 aaKnown RBP13.25□□□□□ -0.29
CPS1-211ENST00000523702 ZNF579Q8NAF0 562 aaKnown RBP13.24□□□□□ -0.29
CPS1-211ENST00000523702 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
CPS1-211ENST00000523702 PSEN1P49768 467 aa13.23□□□□□ -0.29
CPS1-211ENST00000523702 ZRANB1Q9UGI0 708 aa13.23□□□□□ -0.29
CPS1-211ENST00000523702 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
CPS1-211ENST00000523702 PHF12Q96QT6 1004 aa13.19□□□□□ -0.3
CPS1-211ENST00000523702 BCANQ96GW7 911 aa13.18□□□□□ -0.3
CPS1-211ENST00000523702 MFRPQ9BY79 579 aa13.12□□□□□ -0.31
CPS1-211ENST00000523702 C19orf67A6NJJ6 358 aa13.1□□□□□ -0.31
CPS1-211ENST00000523702 EFCAB3Q8N7B9 438 aa13.09□□□□□ -0.31
CPS1-211ENST00000523702 TRPC6Q9Y210 931 aa13.09□□□□□ -0.31
CPS1-211ENST00000523702 CABP2Q9NPB3 220 aa13.08□□□□□ -0.32
CPS1-211ENST00000523702 RYDENQ9NUL5 291 aaKnown RBP13.07□□□□□ -0.32
CPS1-211ENST00000523702 CADPS2Q86UW7 1296 aa13.06□□□□□ -0.32
CPS1-211ENST00000523702 PPP1R37O75864 691 aa13.05□□□□□ -0.32
CPS1-211ENST00000523702 PRKCSHP14314 528 aaPredicted RBP13.04□□□□□ -0.32
CPS1-211ENST00000523702 MS4A3Q96HJ5 214 aa13.03□□□□□ -0.32
CPS1-211ENST00000523702 FBXO22Q8NEZ5 403 aa13.02□□□□□ -0.33
CPS1-211ENST00000523702 PHF8Q9UPP1 1060 aa13.02□□□□□ -0.33
CPS1-211ENST00000523702 EVX2Q03828 476 aa12.99□□□□□ -0.33
CPS1-211ENST00000523702 SOX12O15370 315 aa12.96□□□□□ -0.33
CPS1-211ENST00000523702 TMEM106CQ9BVX2 250 aa12.96□□□□□ -0.33
CPS1-211ENST00000523702 NLRP6P59044 892 aa12.94□□□□□ -0.34
CPS1-211ENST00000523702 MS4A4AQ96JQ5 239 aa12.93□□□□□ -0.34
CPS1-211ENST00000523702 HAX1O00165 279 aa12.89□□□□□ -0.35
CPS1-211ENST00000523702 GALR2O43603 387 aaPredicted RBP12.89□□□□□ -0.35
CPS1-211ENST00000523702 TTLL13PA6NNM8 815 aa12.86□□□□□ -0.35
CPS1-211ENST00000523702 TPRNQ4KMQ1 711 aa12.86□□□□□ -0.35
CPS1-211ENST00000523702 NBR1Q14596 966 aa12.85□□□□□ -0.35
CPS1-211ENST00000523702 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
CPS1-211ENST00000523702 TIE1P35590 1138 aa12.83□□□□□ -0.36
CPS1-211ENST00000523702 GOLGA2Q08379 1002 aa12.82□□□□□ -0.36
CPS1-211ENST00000523702 MKRN3Q13064 507 aaKnown RBP12.8□□□□□ -0.36
CPS1-211ENST00000523702 WDR70Q9NW82 654 aa12.8□□□□□ -0.36
CPS1-211ENST00000523702 KCNV2Q8TDN2 545 aa12.79□□□□□ -0.36
CPS1-211ENST00000523702 TRIM35Q9UPQ4 493 aa12.77□□□□□ -0.37
CPS1-211ENST00000523702 NCKAP5LQ9HCH0 1330 aa12.77□□□□□ -0.37
CPS1-211ENST00000523702 ILDR1Q86SU0 546 aaPredicted RBP12.76□□□□□ -0.37
CPS1-211ENST00000523702 DPY19L2Q6NUT2 758 aa12.74□□□□□ -0.37
CPS1-211ENST00000523702 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.74□□□□□ -0.375e-8■■■■■ 35.8
CPS1-211ENST00000523702 ATN1P54259 1190 aaPredicted RBP12.73□□□□□ -0.37
CPS1-211ENST00000523702 LARP6Q9BRS8 491 aaKnown RBP12.7□□□□□ -0.38
CPS1-211ENST00000523702 P3H3Q8IVL6 736 aa12.69□□□□□ -0.38
CPS1-211ENST00000523702 ATMINO43313 823 aaPredicted RBP12.68□□□□□ -0.38
CPS1-211ENST00000523702 CRISPLD2Q9H0B8 497 aa12.67□□□□□ -0.38
CPS1-211ENST00000523702 GABBR2O75899 941 aa12.65□□□□□ -0.38
CPS1-211ENST00000523702 PDE4AP27815 886 aa12.65□□□□□ -0.38
CPS1-211ENST00000523702 E2F4Q16254 413 aa12.65□□□□□ -0.38
CPS1-211ENST00000523702 ASTLQ6HA08 431 aaPredicted RBP12.64□□□□□ -0.39
CPS1-211ENST00000523702 CLCN6P51797 869 aa12.63□□□□□ -0.39
CPS1-211ENST00000523702 MFSD10Q14728 455 aa12.63□□□□□ -0.39
CPS1-211ENST00000523702 PDCD7Q8N8D1 485 aaKnown RBP12.63□□□□□ -0.39
CPS1-211ENST00000523702 IRX5P78411 483 aaPredicted RBP12.61□□□□□ -0.39
CPS1-211ENST00000523702 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
CPS1-211ENST00000523702 ARHGEF1Q92888 912 aaKnown RBP12.59□□□□□ -0.39
CPS1-211ENST00000523702 DDX27Q96GQ7 796 aaKnown RBP12.58□□□□□ -0.4
CPS1-211ENST00000523702 POTEHQ6S545 545 aa12.56□□□□□ -0.4
CPS1-211ENST00000523702 MICALL2Q8IY33 904 aa12.56□□□□□ -0.4
CPS1-211ENST00000523702 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.55□□□□□ -0.4
CPS1-211ENST00000523702 OCEL1Q9H607 264 aa12.55□□□□□ -0.4
CPS1-211ENST00000523702 SEMA3EO15041 775 aa12.54□□□□□ -0.4
CPS1-211ENST00000523702 GPHNQ9NQX3 736 aaPredicted RBP12.54□□□□□ -0.4
CPS1-211ENST00000523702 CAMK2BQ13554 666 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms