RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 PAXIP1Q6ZW49 1069 aaPredicted RBP14.31□□□□□ -0.12
PCM1-216ENST00000522777 RASEFQ8IZ41 740 aa14.31□□□□□ -0.12
PCM1-216ENST00000522777 FAM212AQ96EL1 285 aa14.3□□□□□ -0.12
PCM1-216ENST00000522777 HS6ST3Q8IZP7 471 aa14.28□□□□□ -0.12
PCM1-216ENST00000522777 CFAP44Q96MT7 982 aa14.26□□□□□ -0.13
PCM1-216ENST00000522777 VSIG10Q8N0Z9 540 aa14.25□□□□□ -0.13
PCM1-216ENST00000522777 RIOK3O14730 519 aaKnown RBP14.23□□□□□ -0.13
PCM1-216ENST00000522777 CHRM1P11229 460 aaPredicted RBP14.21□□□□□ -0.13
PCM1-216ENST00000522777 SPRYD3Q8NCJ5 442 aa14.21□□□□□ -0.13
PCM1-216ENST00000522777 DNAJC5Q9H3Z4 198 aa14.21□□□□□ -0.13
PCM1-216ENST00000522777 CHADLQ6NUI6 762 aa14.17□□□□□ -0.14
PCM1-216ENST00000522777 KDM2AQ9Y2K7 1162 aa14.17□□□□□ -0.14
PCM1-216ENST00000522777 TAOK2Q9UL54 1235 aa14.13□□□□□ -0.15
PCM1-216ENST00000522777 VGFO15240 615 aaPredicted RBP14.12□□□□□ -0.15
PCM1-216ENST00000522777 NKX1-1Q15270 411 aaPredicted RBP14.11□□□□□ -0.15
PCM1-216ENST00000522777 TSHZ2Q9NRE2 1034 aa14.11□□□□□ -0.15
PCM1-216ENST00000522777 PYGBP11216 843 aa14.1□□□□□ -0.15
PCM1-216ENST00000522777 FARP1Q9Y4F1 1045 aaPredicted RBP14.09□□□□□ -0.15
PCM1-216ENST00000522777 SGIP1Q9BQI5 828 aa14.08□□□□□ -0.16
PCM1-216ENST00000522777 STK25O00506 426 aa14.05□□□□□ -0.16
PCM1-216ENST00000522777 FXR2P51116 673 aaKnown RBP eCLIP14.04□□□□□ -0.162e-7■□□□□ 9.9
PCM1-216ENST00000522777 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.03□□□□□ -0.16
PCM1-216ENST00000522777 PRKAR2AP13861 404 aaKnown RBP14.03□□□□□ -0.16
PCM1-216ENST00000522777 ZFP91Q96JP5 570 aaPredicted RBP14.03□□□□□ -0.16
PCM1-216ENST00000522777 TSPYL2Q9H2G4 693 aaPredicted RBP14.01□□□□□ -0.17
PCM1-216ENST00000522777 BCANQ96GW7 911 aa14□□□□□ -0.17
PCM1-216ENST00000522777 GTPBP6O43824 516 aaPredicted RBP13.99□□□□□ -0.17
PCM1-216ENST00000522777 BCL11BQ9C0K0 894 aaPredicted RBP13.99□□□□□ -0.17
PCM1-216ENST00000522777 STK24Q9Y6E0 443 aa13.96□□□□□ -0.17
PCM1-216ENST00000522777 CCDC61Q9Y6R9 512 aa13.94□□□□□ -0.18
PCM1-216ENST00000522777 CHRDL2Q6WN34 429 aa13.93□□□□□ -0.18
PCM1-216ENST00000522777 ZNF467Q7Z7K2 595 aaPredicted RBP13.91□□□□□ -0.18
PCM1-216ENST00000522777 PIP4P2Q8N4L2 257 aa13.91□□□□□ -0.18
PCM1-216ENST00000522777 PCDHB8Q9UN66 801 aa13.86□□□□□ -0.19
PCM1-216ENST00000522777 PCDHB13Q9Y5F0 798 aa13.86□□□□□ -0.19
PCM1-216ENST00000522777 PDAP1Q13442 181 aaKnown RBP13.84□□□□□ -0.19
PCM1-216ENST00000522777 ZNF579Q8NAF0 562 aaKnown RBP13.83□□□□□ -0.2
PCM1-216ENST00000522777 RYDENQ9NUL5 291 aaKnown RBP13.8□□□□□ -0.2
PCM1-216ENST00000522777 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
PCM1-216ENST00000522777 PSEN1P49768 467 aa13.76□□□□□ -0.21
PCM1-216ENST00000522777 IFNL1Q8IU54 200 aa13.75□□□□□ -0.21
PCM1-216ENST00000522777 KIF12Q96FN5 646 aa13.75□□□□□ -0.21
PCM1-216ENST00000522777 MAP3K13O43283 966 aa13.73□□□□□ -0.21
PCM1-216ENST00000522777 MFRPQ9BY79 579 aa13.69□□□□□ -0.22
PCM1-216ENST00000522777 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
PCM1-216ENST00000522777 CD44P16070 742 aaKnown RBP13.67□□□□□ -0.22
PCM1-216ENST00000522777 ZRANB1Q9UGI0 708 aa13.66□□□□□ -0.22
PCM1-216ENST00000522777 PHF12Q96QT6 1004 aa13.63□□□□□ -0.23
PCM1-216ENST00000522777 CADPS2Q86UW7 1296 aa13.62□□□□□ -0.23
PCM1-216ENST00000522777 NBR1Q14596 966 aa13.59□□□□□ -0.23
PCM1-216ENST00000522777 EFCAB3Q8N7B9 438 aa13.59□□□□□ -0.23
PCM1-216ENST00000522777 FBXO22Q8NEZ5 403 aa13.59□□□□□ -0.23
PCM1-216ENST00000522777 CABP2Q9NPB3 220 aa13.59□□□□□ -0.23
PCM1-216ENST00000522777 TPRNQ4KMQ1 711 aa13.57□□□□□ -0.24
PCM1-216ENST00000522777 C19orf67A6NJJ6 358 aa13.54□□□□□ -0.24
PCM1-216ENST00000522777 SOX12O15370 315 aa13.54□□□□□ -0.24
PCM1-216ENST00000522777 PPP1R37O75864 691 aa13.53□□□□□ -0.24
PCM1-216ENST00000522777 PHF8Q9UPP1 1060 aa13.53□□□□□ -0.24
PCM1-216ENST00000522777 NLRP6P59044 892 aa13.52□□□□□ -0.25
PCM1-216ENST00000522777 MS4A3Q96HJ5 214 aa13.49□□□□□ -0.25
PCM1-216ENST00000522777 TRPC6Q9Y210 931 aa13.49□□□□□ -0.25
PCM1-216ENST00000522777 P3H3Q8IVL6 736 aa13.45□□□□□ -0.26
PCM1-216ENST00000522777 MS4A4AQ96JQ5 239 aa13.45□□□□□ -0.26
PCM1-216ENST00000522777 ABCC9O60706 1549 aa13.44□□□□□ -0.26
PCM1-216ENST00000522777 TMEM106CQ9BVX2 250 aa13.44□□□□□ -0.26
PCM1-216ENST00000522777 KCNV2Q8TDN2 545 aa13.43□□□□□ -0.26
PCM1-216ENST00000522777 WDR70Q9NW82 654 aa13.4□□□□□ -0.26
PCM1-216ENST00000522777 TIE1P35590 1138 aa13.36□□□□□ -0.27
PCM1-216ENST00000522777 GOLGA2Q08379 1002 aa13.35□□□□□ -0.27
PCM1-216ENST00000522777 TTLL13PA6NNM8 815 aa13.34□□□□□ -0.27
PCM1-216ENST00000522777 NCKAP5LQ9HCH0 1330 aa13.34□□□□□ -0.27
PCM1-216ENST00000522777 ILDR1Q86SU0 546 aaPredicted RBP13.32□□□□□ -0.28
PCM1-216ENST00000522777 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
PCM1-216ENST00000522777 MKRN3Q13064 507 aaKnown RBP13.3□□□□□ -0.28
PCM1-216ENST00000522777 GALR2O43603 387 aaPredicted RBP13.29□□□□□ -0.28
PCM1-216ENST00000522777 CRISPLD2Q9H0B8 497 aa13.27□□□□□ -0.29
PCM1-216ENST00000522777 EVX2Q03828 476 aa13.26□□□□□ -0.29
PCM1-216ENST00000522777 MFSD10Q14728 455 aa13.26□□□□□ -0.29
PCM1-216ENST00000522777 E2F4Q16254 413 aa13.25□□□□□ -0.29
PCM1-216ENST00000522777 ARHGEF1Q92888 912 aaKnown RBP13.25□□□□□ -0.29
PCM1-216ENST00000522777 TRIM35Q9UPQ4 493 aa13.23□□□□□ -0.29
PCM1-216ENST00000522777 LARP6Q9BRS8 491 aaKnown RBP13.22□□□□□ -0.29
PCM1-216ENST00000522777 HAX1O00165 279 aa13.21□□□□□ -0.29
PCM1-216ENST00000522777 PDE4AP27815 886 aa13.21□□□□□ -0.29
PCM1-216ENST00000522777 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.21□□□□□ -0.291e-13■■□□□ 14.3
PCM1-216ENST00000522777 CLCN6P51797 869 aa13.19□□□□□ -0.3
PCM1-216ENST00000522777 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.17□□□□□ -0.3
PCM1-216ENST00000522777 DDX27Q96GQ7 796 aaKnown RBP13.17□□□□□ -0.3
PCM1-216ENST00000522777 LMOD2Q6P5Q4 547 aa13.15□□□□□ -0.3
PCM1-216ENST00000522777 ATN1P54259 1190 aaPredicted RBP13.14□□□□□ -0.31
PCM1-216ENST00000522777 CAMK2BQ13554 666 aa13.14□□□□□ -0.31
PCM1-216ENST00000522777 PDCD7Q8N8D1 485 aaKnown RBP13.14□□□□□ -0.31
PCM1-216ENST00000522777 DPY19L2Q6NUT2 758 aa13.13□□□□□ -0.31
PCM1-216ENST00000522777 ARIH1Q9Y4X5 557 aaPredicted RBP13.13□□□□□ -0.31
PCM1-216ENST00000522777 ATMINO43313 823 aaPredicted RBP13.11□□□□□ -0.31
PCM1-216ENST00000522777 ASTLQ6HA08 431 aaPredicted RBP13.11□□□□□ -0.31
PCM1-216ENST00000522777 TESPA1A2RU30 521 aaPredicted RBP13.1□□□□□ -0.31
PCM1-216ENST00000522777 SEMA3EO15041 775 aa13.1□□□□□ -0.31
PCM1-216ENST00000522777 IRX5P78411 483 aaPredicted RBP13.09□□□□□ -0.31
PCM1-216ENST00000522777 MICALL2Q8IY33 904 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms