RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 EIF4G2P78344 907 aaKnown RBP eCLIP15□□□□□ -0.01
LAMA4-219ENST00000522006 TSPY4P0CV99 314 aa15□□□□□ -0.01
LAMA4-219ENST00000522006 TSPY10P0CW01 314 aa15□□□□□ -0.01
LAMA4-219ENST00000522006 ANP32EQ9BTT0 268 aa14.99□□□□□ -0.01
LAMA4-219ENST00000522006 MTUS2Q5JR59 1369 aa14.99□□□□□ -0.01
LAMA4-219ENST00000522006 ZBTB7CA1YPR0 619 aa14.98□□□□□ -0.01
LAMA4-219ENST00000522006 A0A0G2JS52 829 aa14.97□□□□□ -0.01
LAMA4-219ENST00000522006 PTMAP06454 111 aaKnown RBP14.95□□□□□ -0.02
LAMA4-219ENST00000522006 SENP3Q9H4L4 574 aaPredicted RBP14.94□□□□□ -0.02
LAMA4-219ENST00000522006 RRP7BPQ9NSQ0 103 aa14.93□□□□□ -0.02
LAMA4-219ENST00000522006 SENP3-EIF4A1A0A087X0R7 540 aa14.92□□□□□ -0.02
LAMA4-219ENST00000522006 TPRNQ4KMQ1 711 aa14.92□□□□□ -0.02
LAMA4-219ENST00000522006 TNNT2P45379 298 aaPredicted RBP14.92□□□□□ -0.02
LAMA4-219ENST00000522006 PLEKHG5O94827 1062 aa14.92□□□□□ -0.02
LAMA4-219ENST00000522006 CASC1Q6TDU7 716 aa14.91□□□□□ -0.02
LAMA4-219ENST00000522006 C14orf37Q86TY3 774 aa14.91□□□□□ -0.02
LAMA4-219ENST00000522006 DNTTIP2Q5QJE6 756 aaKnown RBP14.91□□□□□ -0.02
LAMA4-219ENST00000522006 ZRSR1Q15695 479 aaKnown RBP14.9□□□□□ -0.02
LAMA4-219ENST00000522006 CLIP1P30622 1438 aa14.89□□□□□ -0.03
LAMA4-219ENST00000522006 SUPT16HQ9Y5B9 1047 aaKnown RBP14.89□□□□□ -0.03
LAMA4-219ENST00000522006 PPM1GO15355 546 aaPredicted RBP14.88□□□□□ -0.03
LAMA4-219ENST00000522006 FTSJ3Q8IY81 847 aaKnown RBP14.87□□□□□ -0.03
LAMA4-219ENST00000522006 LAS1LQ9Y4W2 734 aaKnown RBP14.87□□□□□ -0.03
LAMA4-219ENST00000522006 CFAP53Q96M91 514 aa14.86□□□□□ -0.03
LAMA4-219ENST00000522006 NAP1L5Q96NT1 182 aaPredicted RBP14.86□□□□□ -0.03
LAMA4-219ENST00000522006 PPP1R15AO75807 674 aaPredicted RBP14.85□□□□□ -0.03
LAMA4-219ENST00000522006 RTN4Q9NQC3 1192 aaKnown RBP14.84□□□□□ -0.03
LAMA4-219ENST00000522006 ZCCHC6Q5VYS8 1495 aaKnown RBP14.83□□□□□ -0.03
LAMA4-219ENST00000522006 ERICH6BQ5W0A0 696 aa14.83□□□□□ -0.04
LAMA4-219ENST00000522006 RGL3Q3MIN7 710 aa14.83□□□□□ -0.04
LAMA4-219ENST00000522006 KNSTRNQ9Y448 316 aa14.83□□□□□ -0.04
LAMA4-219ENST00000522006 NOP58Q9Y2X3 529 aaKnown RBP14.8□□□□□ -0.04
LAMA4-219ENST00000522006 CHMP7Q8WUX9 453 aaPredicted RBP14.8□□□□□ -0.04
LAMA4-219ENST00000522006 RSF1Q96T23 1441 aaPredicted RBP14.79□□□□□ -0.04
LAMA4-219ENST00000522006 PPP4R2Q9NY27 417 aa14.79□□□□□ -0.04
LAMA4-219ENST00000522006 RGS3P49796 1198 aa14.79□□□□□ -0.04
LAMA4-219ENST00000522006 NEUROD2Q15784 382 aa14.78□□□□□ -0.04
LAMA4-219ENST00000522006 CDCA8Q53HL2 280 aa14.78□□□□□ -0.04
LAMA4-219ENST00000522006 PLCB2Q00722 1185 aa14.78□□□□□ -0.04
LAMA4-219ENST00000522006 TULP1O00294 542 aaPredicted RBP14.77□□□□□ -0.04
LAMA4-219ENST00000522006 CARD11Q9BXL7 1154 aa14.77□□□□□ -0.05
LAMA4-219ENST00000522006 GOLGA3Q08378 1498 aa14.76□□□□□ -0.05
LAMA4-219ENST00000522006 HSP90AB1P08238 724 aaKnown RBP14.76□□□□□ -0.05
LAMA4-219ENST00000522006 MAPK8IP3Q9UPT6 1336 aa14.76□□□□□ -0.05
LAMA4-219ENST00000522006 KCNH8Q96L42 1107 aa14.76□□□□□ -0.05
LAMA4-219ENST00000522006 CEP162Q5TB80 1403 aa14.75□□□□□ -0.05
LAMA4-219ENST00000522006 CCDC180Q9P1Z9 1646 aa14.75□□□□□ -0.05
LAMA4-219ENST00000522006 FRAT1Q92837 279 aaPredicted RBP14.75□□□□□ -0.05
LAMA4-219ENST00000522006 TAOK2Q9UL54 1235 aa14.74□□□□□ -0.05
LAMA4-219ENST00000522006 GOLGA6L6A8MZA4 724 aa14.73□□□□□ -0.05
LAMA4-219ENST00000522006 MYO15BQ96JP2 1530 aa14.72□□□□□ -0.05
LAMA4-219ENST00000522006 HAP1P54257 671 aaPredicted RBP14.71□□□□□ -0.05
LAMA4-219ENST00000522006 PLEKHD1A6NEE1 506 aa14.7□□□□□ -0.06
LAMA4-219ENST00000522006 CC2D1BQ5T0F9 858 aaKnown RBP14.69□□□□□ -0.06
LAMA4-219ENST00000522006 NUDCQ9Y266 331 aa14.69□□□□□ -0.06
LAMA4-219ENST00000522006 B4GALNT3Q6L9W6 998 aa14.68□□□□□ -0.06
LAMA4-219ENST00000522006 OS9Q13438 667 aaPredicted RBP14.68□□□□□ -0.06
LAMA4-219ENST00000522006 CHMP4BQ9H444 224 aaKnown RBP14.66□□□□□ -0.06
LAMA4-219ENST00000522006 FGD1P98174 961 aa14.66□□□□□ -0.06
LAMA4-219ENST00000522006 HSCBQ8IWL3 235 aa14.66□□□□□ -0.06
LAMA4-219ENST00000522006 NAP1L2Q9ULW6 460 aaPredicted RBP14.65□□□□□ -0.06
LAMA4-219ENST00000522006 CFDP1Q9UEE9 299 aaPredicted RBP14.65□□□□□ -0.06
LAMA4-219ENST00000522006 MS4A1P11836 297 aa14.65□□□□□ -0.07
LAMA4-219ENST00000522006 SIN3AQ96ST3 1273 aa14.65□□□□□ -0.07
LAMA4-219ENST00000522006 EEA1Q15075 1411 aa14.64□□□□□ -0.07
LAMA4-219ENST00000522006 KCNJ4P48050 445 aa14.64□□□□□ -0.07
LAMA4-219ENST00000522006 U2SURPO15042 1029 aaKnown RBP14.62□□□□□ -0.07
LAMA4-219ENST00000522006 NRDCO43847 1150 aa14.62□□□□□ -0.07
LAMA4-219ENST00000522006 CHAF1AQ13111 956 aaPredicted RBP14.62□□□□□ -0.07
LAMA4-219ENST00000522006 POGKQ9P215 609 aa14.62□□□□□ -0.07
LAMA4-219ENST00000522006 SPRYD3Q8NCJ5 442 aa14.62□□□□□ -0.07
LAMA4-219ENST00000522006 MSNP26038 577 aaKnown RBP14.62□□□□□ -0.07
LAMA4-219ENST00000522006 ARID4BQ4LE39 1312 aaPredicted RBP14.61□□□□□ -0.07
LAMA4-219ENST00000522006 L1TD1Q5T7N2 865 aaKnown RBP14.61□□□□□ -0.07
LAMA4-219ENST00000522006 GOLGA6L4A6NEF3 574 aa14.6□□□□□ -0.07
LAMA4-219ENST00000522006 DEKP35659 375 aaKnown RBP14.6□□□□□ -0.07
LAMA4-219ENST00000522006 PNNQ9H307 717 aaKnown RBP14.59□□□□□ -0.07
LAMA4-219ENST00000522006 LMOD2Q6P5Q4 547 aa14.58□□□□□ -0.08
LAMA4-219ENST00000522006 NPHP1O15259 732 aa14.58□□□□□ -0.08
LAMA4-219ENST00000522006 DRC7Q8IY82 874 aa14.57□□□□□ -0.08
LAMA4-219ENST00000522006 MCCP23508 829 aa14.56□□□□□ -0.08
LAMA4-219ENST00000522006 CEP164Q9UPV0 1460 aa14.55□□□□□ -0.08
LAMA4-219ENST00000522006 TMF1P82094 1093 aa14.55□□□□□ -0.08
LAMA4-219ENST00000522006 TNIKQ9UKE5 1360 aa14.54□□□□□ -0.08
LAMA4-219ENST00000522006 GOLGA2Q08379 1002 aa14.54□□□□□ -0.08
LAMA4-219ENST00000522006 WRNQ14191 1432 aaPredicted RBP eCLIP14.53□□□□□ -0.08
LAMA4-219ENST00000522006 AMER1Q5JTC6 1135 aaPredicted RBP14.52□□□□□ -0.09
LAMA4-219ENST00000522006 RBM19Q9Y4C8 960 aaKnown RBP14.52□□□□□ -0.09
LAMA4-219ENST00000522006 KIF27Q86VH2 1401 aa14.51□□□□□ -0.09
LAMA4-219ENST00000522006 DCAF11Q8TEB1 546 aa14.5□□□□□ -0.09
LAMA4-219ENST00000522006 CLSTN1O94985 981 aa14.48□□□□□ -0.09
LAMA4-219ENST00000522006 CFAP44Q96MT7 982 aa14.48□□□□□ -0.09
LAMA4-219ENST00000522006 CCER2I3L3R5 266 aa14.48□□□□□ -0.09
LAMA4-219ENST00000522006 MORC1Q86VD1 984 aa14.47□□□□□ -0.09
LAMA4-219ENST00000522006 RB1CC1Q8TDY2 1594 aa14.46□□□□□ -0.09
LAMA4-219ENST00000522006 CCNB3Q8WWL7 1395 aa14.46□□□□□ -0.09
LAMA4-219ENST00000522006 GNL2Q13823 731 aaKnown RBP14.46□□□□□ -0.1
LAMA4-219ENST00000522006 SOX12O15370 315 aa14.45□□□□□ -0.1
LAMA4-219ENST00000522006 APBB1O00213 710 aa14.45□□□□□ -0.1
LAMA4-219ENST00000522006 PTMSP20962 102 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms