RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	TIMELESS	Q9UNS1	1208 aa		13.95	□□□□□ -0.18
SPIDR-215	ENST00000521798	GSE1	Q14687	1217 aa		13.93	□□□□□ -0.18
SPIDR-215	ENST00000521798	NKX1-1	Q15270	411 aa	Predicted RBP	13.91	□□□□□ -0.18
SPIDR-215	ENST00000521798	TULP1	O00294	542 aa	Predicted RBP	13.89	□□□□□ -0.19
SPIDR-215	ENST00000521798	GTPBP6	O43824	516 aa	Predicted RBP	13.87	□□□□□ -0.19
SPIDR-215	ENST00000521798	GTF3C3	Q9Y5Q9	886 aa		13.86	□□□□□ -0.19
SPIDR-215	ENST00000521798	RIOK3	O14730	519 aa	Known RBP	13.85	□□□□□ -0.19
SPIDR-215	ENST00000521798	ABCC9	O60706	1549 aa		13.84	□□□□□ -0.19
SPIDR-215	ENST00000521798	NUBP1	P53384	320 aa		13.81	□□□□□ -0.2
SPIDR-215	ENST00000521798	ERICH6	Q7L0X2	663 aa		13.79	□□□□□ -0.2
SPIDR-215	ENST00000521798	STK25	O00506	426 aa		13.75	□□□□□ -0.21
SPIDR-215	ENST00000521798	VGF	O15240	615 aa	Predicted RBP	13.74	□□□□□ -0.21
SPIDR-215	ENST00000521798	TMEM132A	Q24JP5	1023 aa		13.73	□□□□□ -0.21
SPIDR-215	ENST00000521798	DCAF8	Q5TAQ9	597 aa		13.73	□□□□□ -0.21
SPIDR-215	ENST00000521798	RYDEN	Q9NUL5	291 aa	Known RBP	13.68	□□□□□ -0.22
SPIDR-215	ENST00000521798	SGIP1	Q9BQI5	828 aa		13.67	□□□□□ -0.22
SPIDR-215	ENST00000521798	FAM212A	Q96EL1	285 aa		13.66	□□□□□ -0.22
SPIDR-215	ENST00000521798	ARX	Q96QS3	562 aa		13.66	□□□□□ -0.22
SPIDR-215	ENST00000521798	CHRM1	P11229	460 aa	Predicted RBP	13.65	□□□□□ -0.22
SPIDR-215	ENST00000521798	POTED	Q86YR6	584 aa		13.64	□□□□□ -0.23
SPIDR-215	ENST00000521798	P3H3	Q8IVL6	736 aa		13.64	□□□□□ -0.23
SPIDR-215	ENST00000521798	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.61	□□□□□ -0.23
SPIDR-215	ENST00000521798	STK24	Q9Y6E0	443 aa		13.6	□□□□□ -0.23
SPIDR-215	ENST00000521798	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.59	□□□□□ -0.23
SPIDR-215	ENST00000521798	ZFP91	Q96JP5	570 aa	Predicted RBP	13.59	□□□□□ -0.23
SPIDR-215	ENST00000521798	MNX1	P50219	401 aa	Predicted RBP	13.54	□□□□□ -0.24
SPIDR-215	ENST00000521798	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.52	□□□□□ -0.25
SPIDR-215	ENST00000521798	CREBZF	Q9NS37	354 aa		13.52	□□□□□ -0.25
SPIDR-215	ENST00000521798	LMOD2	Q6P5Q4	547 aa		13.49	□□□□□ -0.25
SPIDR-215	ENST00000521798	RASEF	Q8IZ41	740 aa		13.49	□□□□□ -0.25
SPIDR-215	ENST00000521798	KCNV2	Q8TDN2	545 aa		13.48	□□□□□ -0.25
SPIDR-215	ENST00000521798	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
SPIDR-215	ENST00000521798	C14orf37	Q86TY3	774 aa		13.47	□□□□□ -0.25
SPIDR-215	ENST00000521798	DAXX	Q9UER7	740 aa	Predicted RBP	13.45	□□□□□ -0.26
SPIDR-215	ENST00000521798	WDR70	Q9NW82	654 aa		13.44	□□□□□ -0.26
SPIDR-215	ENST00000521798	PYGB	P11216	843 aa		13.43	□□□□□ -0.26
SPIDR-215	ENST00000521798	PRR29	P0C7W0	189 aa		13.41	□□□□□ -0.26
SPIDR-215	ENST00000521798	CADPS2	Q86UW7	1296 aa		13.41	□□□□□ -0.26
SPIDR-215	ENST00000521798	HOMEZ	Q8IX15	550 aa		13.37	□□□□□ -0.27
SPIDR-215	ENST00000521798	CLEC11A	Q9Y240	323 aa		13.37	□□□□□ -0.27
SPIDR-215	ENST00000521798	BRPF1	P55201	1214 aa	Predicted RBP	13.36	□□□□□ -0.27
SPIDR-215	ENST00000521798	AKT1S1	Q96B36	256 aa		13.36	□□□□□ -0.27
SPIDR-215	ENST00000521798	ZCCHC6	Q5VYS8	1495 aa	Known RBP	13.29	□□□□□ -0.28
SPIDR-215	ENST00000521798	NACAD	O15069	1562 aa		13.29	□□□□□ -0.28
SPIDR-215	ENST00000521798	RB1CC1	Q8TDY2	1594 aa		13.29	□□□□□ -0.28
SPIDR-215	ENST00000521798	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.29	□□□□□ -0.28
SPIDR-215	ENST00000521798	RBM42	Q9BTD8	480 aa	Known RBP	13.28	□□□□□ -0.28
SPIDR-215	ENST00000521798	ZC3H15	Q8WU90	426 aa	Known RBP	13.26	□□□□□ -0.29
SPIDR-215	ENST00000521798	ARHGEF1	Q92888	912 aa	Known RBP	13.26	□□□□□ -0.29
SPIDR-215	ENST00000521798	MYO15B	Q96JP2	1530 aa		13.24	□□□□□ -0.29
SPIDR-215	ENST00000521798	PDAP1	Q13442	181 aa	Known RBP	13.24	□□□□□ -0.29
SPIDR-215	ENST00000521798	REM2	Q8IYK8	340 aa	Predicted RBP	13.22	□□□□□ -0.29
SPIDR-215	ENST00000521798	NEUROD2	Q15784	382 aa		13.21	□□□□□ -0.29
SPIDR-215	ENST00000521798	MFRP	Q9BY79	579 aa		13.21	□□□□□ -0.29
SPIDR-215	ENST00000521798	DCAF1	Q9Y4B6	1507 aa		13.19	□□□□□ -0.3
SPIDR-215	ENST00000521798	TESPA1	A2RU30	521 aa	Predicted RBP	13.18	□□□□□ -0.3
SPIDR-215	ENST00000521798	E2F4	Q16254	413 aa		13.17	□□□□□ -0.3
SPIDR-215	ENST00000521798	SLC24A3	Q9HC58	644 aa		13.16	□□□□□ -0.3
SPIDR-215	ENST00000521798	SEMA3E	O15041	775 aa		13.13	□□□□□ -0.31
SPIDR-215	ENST00000521798	PCDHB8	Q9UN66	801 aa		13.12	□□□□□ -0.31
SPIDR-215	ENST00000521798	PCDHB13	Q9Y5F0	798 aa		13.12	□□□□□ -0.31
SPIDR-215	ENST00000521798	PSEN1	P49768	467 aa		13.11	□□□□□ -0.31
SPIDR-215	ENST00000521798	CACNB1	Q02641	598 aa	Predicted RBP	13.11	□□□□□ -0.31
SPIDR-215	ENST00000521798	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.11	□□□□□ -0.31
SPIDR-215	ENST00000521798	PPP1R37	O75864	691 aa		13.08	□□□□□ -0.32
SPIDR-215	ENST00000521798	ZNF579	Q8NAF0	562 aa	Known RBP	13.08	□□□□□ -0.32
SPIDR-215	ENST00000521798	ZMYND10	O75800	440 aa		13.07	□□□□□ -0.32
SPIDR-215	ENST00000521798	PITPNM1	O00562	1244 aa		13.06	□□□□□ -0.32
SPIDR-215	ENST00000521798	FBXO22	Q8NEZ5	403 aa		13.06	□□□□□ -0.32
SPIDR-215	ENST00000521798	SUPT5H	O00267	1087 aa	Known RBP	13.05	□□□□□ -0.32
SPIDR-215	ENST00000521798	NLRP6	P59044	892 aa		13.04	□□□□□ -0.32
SPIDR-215	ENST00000521798	SMYD5	Q6GMV2	418 aa		13.03	□□□□□ -0.32
SPIDR-215	ENST00000521798	CCDC61	Q9Y6R9	512 aa		13	□□□□□ -0.33
SPIDR-215	ENST00000521798	SOX12	O15370	315 aa		12.99	□□□□□ -0.33
SPIDR-215	ENST00000521798	UNC13A	Q9UPW8	1703 aa		12.99	□□□□□ -0.33
SPIDR-215	ENST00000521798	EFCAB3	Q8N7B9	438 aa		12.98	□□□□□ -0.33
SPIDR-215	ENST00000521798	NCKAP5L	Q9HCH0	1330 aa		12.97	□□□□□ -0.33
SPIDR-215	ENST00000521798	BARGIN	Q6ZT62	677 aa		12.97	□□□□□ -0.33
SPIDR-215	ENST00000521798	PHF8	Q9UPP1	1060 aa		12.97	□□□□□ -0.33
SPIDR-215	ENST00000521798	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.97	□□□□□ -0.33
SPIDR-215	ENST00000521798	MFSD10	Q14728	455 aa		12.95	□□□□□ -0.34
SPIDR-215	ENST00000521798	CHADL	Q6NUI6	762 aa		12.95	□□□□□ -0.34
SPIDR-215	ENST00000521798	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.95	□□□□□ -0.34
SPIDR-215	ENST00000521798	CABP2	Q9NPB3	220 aa		12.93	□□□□□ -0.34
SPIDR-215	ENST00000521798	BICRA	Q9NZM4	1560 aa		12.93	□□□□□ -0.34
SPIDR-215	ENST00000521798	PDE4A	P27815	886 aa		12.92	□□□□□ -0.34
SPIDR-215	ENST00000521798	LARP6	Q9BRS8	491 aa	Known RBP	12.92	□□□□□ -0.34
SPIDR-215	ENST00000521798	SCRIB	Q14160	1630 aa		12.91	□□□□□ -0.34
SPIDR-215	ENST00000521798	IFNL1	Q8IU54	200 aa		12.9	□□□□□ -0.34
SPIDR-215	ENST00000521798	AK7	Q96M32	723 aa		12.89	□□□□□ -0.35
SPIDR-215	ENST00000521798	CRISPLD2	Q9H0B8	497 aa		12.89	□□□□□ -0.35
SPIDR-215	ENST00000521798	CAMK2B	Q13554	666 aa		12.86	□□□□□ -0.35
SPIDR-215	ENST00000521798	DDX27	Q96GQ7	796 aa	Known RBP	12.86	□□□□□ -0.35
SPIDR-215	ENST00000521798	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.84	□□□□□ -0.35
SPIDR-215	ENST00000521798	GPIHBP1	Q8IV16	184 aa		12.82	□□□□□ -0.36
SPIDR-215	ENST00000521798	MAP3K13	O43283	966 aa		12.81	□□□□□ -0.36
SPIDR-215	ENST00000521798	MS4A4A	Q96JQ5	239 aa		12.81	□□□□□ -0.36
SPIDR-215	ENST00000521798	RBM26	Q5T8P6	1007 aa	Known RBP	12.8	□□□□□ -0.36
SPIDR-215	ENST00000521798	PAK3	O75914	559 aa	Predicted RBP	12.79	□□□□□ -0.36
SPIDR-215	ENST00000521798	KIF12	Q96FN5	646 aa		12.79	□□□□□ -0.36

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