RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 CCDC61Q9Y6R9 512 aa10.25□□□□□ -0.77
VPS13B-208ENST00000521037 POTEJP0CG39 1038 aa10.24□□□□□ -0.77
VPS13B-208ENST00000521037 KIF12Q96FN5 646 aa10.2□□□□□ -0.78
VPS13B-208ENST00000521037 TSPYL2Q9H2G4 693 aaPredicted RBP10.2□□□□□ -0.78
VPS13B-208ENST00000521037 C7P10643 843 aa10.18□□□□□ -0.78
VPS13B-208ENST00000521037 METRNQ9UJH8 293 aa10.18□□□□□ -0.78
VPS13B-208ENST00000521037 SLC39A7Q92504 469 aa10.16□□□□□ -0.78
VPS13B-208ENST00000521037 ATN1P54259 1190 aaPredicted RBP10.15□□□□□ -0.78
VPS13B-208ENST00000521037 RASEFQ8IZ41 740 aa10.14□□□□□ -0.79
VPS13B-208ENST00000521037 TRPC6Q9Y210 931 aa10.14□□□□□ -0.79
VPS13B-208ENST00000521037 POTEFA5A3E0 1075 aa10.13□□□□□ -0.79
VPS13B-208ENST00000521037 ABCC9O60706 1549 aa10.11□□□□□ -0.79
VPS13B-208ENST00000521037 MAP3K13O43283 966 aa10.1□□□□□ -0.79
VPS13B-208ENST00000521037 MIER1Q8N108 512 aa10.1□□□□□ -0.79
VPS13B-208ENST00000521037 BMP2KQ9NSY1 1161 aaPredicted RBP10.1□□□□□ -0.79
VPS13B-208ENST00000521037 POTEMA6NI47 508 aa10.06□□□□□ -0.8
VPS13B-208ENST00000521037 LCE2DQ5TA82 110 aaPredicted RBP10.06□□□□□ -0.8
VPS13B-208ENST00000521037 TIE1P35590 1138 aa10.05□□□□□ -0.8
VPS13B-208ENST00000521037 PLSCR2Q9NRY7 297 aa10.05□□□□□ -0.8
VPS13B-208ENST00000521037 NUBP1P53384 320 aa10.04□□□□□ -0.8
VPS13B-208ENST00000521037 POTEGQ6S5H5 508 aa10.04□□□□□ -0.8
VPS13B-208ENST00000521037 MAMSTRQ6ZN01 415 aa10.03□□□□□ -0.8
VPS13B-208ENST00000521037 TTLL13PA6NNM8 815 aa10.01□□□□□ -0.81
VPS13B-208ENST00000521037 PLEKHG5O94827 1062 aa10□□□□□ -0.81
VPS13B-208ENST00000521037 SGIP1Q9BQI5 828 aa10□□□□□ -0.81
VPS13B-208ENST00000521037 COLQQ9Y215 455 aaPredicted RBP10□□□□□ -0.81
VPS13B-208ENST00000521037 PLCD3Q8N3E9 789 aa9.96□□□□□ -0.82
VPS13B-208ENST00000521037 SCUBE2Q9NQ36 999 aa9.93□□□□□ -0.82
VPS13B-208ENST00000521037 IFNL1Q8IU54 200 aa9.92□□□□□ -0.82
VPS13B-208ENST00000521037 PCDH10Q9P2E7 1040 aa9.92□□□□□ -0.82
VPS13B-208ENST00000521037 PCDHB13Q9Y5F0 798 aa9.92□□□□□ -0.82
VPS13B-208ENST00000521037 IER5LQ5T953 404 aa9.91□□□□□ -0.82
VPS13B-208ENST00000521037 TRIM35Q9UPQ4 493 aa9.91□□□□□ -0.82
VPS13B-208ENST00000521037 ZBTB47Q9UFB7 747 aaPredicted RBP9.9□□□□□ -0.82
VPS13B-208ENST00000521037 FAM163AQ96GL9 167 aaPredicted RBP9.89□□□□□ -0.83
VPS13B-208ENST00000521037 FKBP8Q14318 412 aa9.88□□□□□ -0.83
VPS13B-208ENST00000521037 SEC24BO95487 1268 aa9.85□□□□□ -0.83
VPS13B-208ENST00000521037 FAM212AQ96EL1 285 aa9.83□□□□□ -0.84
VPS13B-208ENST00000521037 TMEM106CQ9BVX2 250 aa9.82□□□□□ -0.84
VPS13B-208ENST00000521037 IRX5P78411 483 aaPredicted RBP9.81□□□□□ -0.84
VPS13B-208ENST00000521037 PYGBP11216 843 aa9.75□□□□□ -0.85
VPS13B-208ENST00000521037 DCAF8Q5TAQ9 597 aa9.74□□□□□ -0.85
VPS13B-208ENST00000521037 SLAIN1Q8ND83 568 aa9.73□□□□□ -0.85
VPS13B-208ENST00000521037 PCDHB8Q9UN66 801 aa9.73□□□□□ -0.85
VPS13B-208ENST00000521037 ST18O60284 1047 aa9.72□□□□□ -0.85
VPS13B-208ENST00000521037 PLCG2P16885 1265 aa9.72□□□□□ -0.85
VPS13B-208ENST00000521037 OCEL1Q9H607 264 aa9.71□□□□□ -0.86
VPS13B-208ENST00000521037 FBXO3Q9UK99 471 aa9.71□□□□□ -0.86
VPS13B-208ENST00000521037 CDAN1Q8IWY9 1227 aa9.68□□□□□ -0.86
VPS13B-208ENST00000521037 CHRM1P11229 460 aaPredicted RBP9.66□□□□□ -0.86
VPS13B-208ENST00000521037 PDCD7Q8N8D1 485 aaKnown RBP9.65□□□□□ -0.86
VPS13B-208ENST00000521037 VASPP50552 380 aaPredicted RBP9.64□□□□□ -0.87
VPS13B-208ENST00000521037 GSE1Q14687 1217 aa9.61□□□□□ -0.87
VPS13B-208ENST00000521037 ILDR1Q86SU0 546 aaPredicted RBP9.6□□□□□ -0.87
VPS13B-208ENST00000521037 ZNF467Q7Z7K2 595 aaPredicted RBP9.59□□□□□ -0.87
VPS13B-208ENST00000521037 DNAJC5Q9H3Z4 198 aa9.58□□□□□ -0.88
VPS13B-208ENST00000521037 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.58□□□□□ -0.88
VPS13B-208ENST00000521037 TMEM121BQ9BXQ6 578 aaPredicted RBP9.57□□□□□ -0.88
VPS13B-208ENST00000521037 CCDC180Q9P1Z9 1646 aa9.56□□□□□ -0.88
VPS13B-208ENST00000521037 KLHL34Q8N239 644 aa9.56□□□□□ -0.88
VPS13B-208ENST00000521037 PSEN1P49768 467 aa9.54□□□□□ -0.88
VPS13B-208ENST00000521037 SNPHO15079 494 aa9.53□□□□□ -0.88
VPS13B-208ENST00000521037 IFNLR1Q8IU57 520 aaPredicted RBP9.53□□□□□ -0.88
VPS13B-208ENST00000521037 MKRN3Q13064 507 aaKnown RBP9.5□□□□□ -0.89
VPS13B-208ENST00000521037 MARVELD3Q96A59 401 aa9.5□□□□□ -0.89
VPS13B-208ENST00000521037 L3MBTL3Q96JM7 780 aaPredicted RBP9.5□□□□□ -0.89
VPS13B-208ENST00000521037 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.5□□□□□ -0.893e-8■■■■□ 24
VPS13B-208ENST00000521037 SPNS2Q8IVW8 549 aa9.49□□□□□ -0.89
VPS13B-208ENST00000521037 DPY19L2Q6NUT2 758 aa9.48□□□□□ -0.89
VPS13B-208ENST00000521037 POTEB3A0JP26 581 aa9.47□□□□□ -0.89
VPS13B-208ENST00000521037 PDAP1Q13442 181 aaKnown RBP9.47□□□□□ -0.89
VPS13B-208ENST00000521037 POTEBQ6S5H4 581 aa9.47□□□□□ -0.89
VPS13B-208ENST00000521037 MMRN1Q13201 1228 aa9.46□□□□□ -0.9
VPS13B-208ENST00000521037 GOLGA2Q08379 1002 aa9.44□□□□□ -0.9
VPS13B-208ENST00000521037 C3orf67Q6ZVT6 689 aa9.44□□□□□ -0.9
VPS13B-208ENST00000521037 SPOCK2Q92563 424 aa9.44□□□□□ -0.9
VPS13B-208ENST00000521037 HOXB3P14651 431 aaPredicted RBP9.4□□□□□ -0.9
VPS13B-208ENST00000521037 KRTAP3-3Q9BYR6 98 aa9.4□□□□□ -0.9
VPS13B-208ENST00000521037 KRTAP3-2Q9BYR7 98 aa9.4□□□□□ -0.9
VPS13B-208ENST00000521037 CABP2Q9NPB3 220 aa9.4□□□□□ -0.9
VPS13B-208ENST00000521037 CIZ1Q9ULV3 898 aaPredicted RBP9.38□□□□□ -0.91
VPS13B-208ENST00000521037 EMP3P54852 163 aa9.37□□□□□ -0.91
VPS13B-208ENST00000521037 HS3ST6Q96QI5 342 aa9.37□□□□□ -0.91
VPS13B-208ENST00000521037 BOLA1Q9Y3E2 137 aa9.37□□□□□ -0.91
VPS13B-208ENST00000521037 FAM205CA6NFA0 338 aa9.33□□□□□ -0.92
VPS13B-208ENST00000521037 RB1CC1Q8TDY2 1594 aa9.33□□□□□ -0.92
VPS13B-208ENST00000521037 EFCAB3Q8N7B9 438 aa9.31□□□□□ -0.92
VPS13B-208ENST00000521037 HOXB1P14653 301 aaPredicted RBP9.3□□□□□ -0.92
VPS13B-208ENST00000521037 TMEM92Q6UXU6 159 aa9.28□□□□□ -0.92
VPS13B-208ENST00000521037 BICRAQ9NZM4 1560 aa9.28□□□□□ -0.92
VPS13B-208ENST00000521037 TRIM41Q8WV44 630 aa9.27□□□□□ -0.93
VPS13B-208ENST00000521037 RNF25Q96BH1 459 aaPredicted RBP9.26□□□□□ -0.93
VPS13B-208ENST00000521037 MS4A4AQ96JQ5 239 aa9.25□□□□□ -0.93
VPS13B-208ENST00000521037 G3V3G9 751 aa9.22□□□□□ -0.93
VPS13B-208ENST00000521037 DOK7Q18PE1 504 aa9.22□□□□□ -0.93
VPS13B-208ENST00000521037 MICALL2Q8IY33 904 aa9.22□□□□□ -0.93
VPS13B-208ENST00000521037 SOX12O15370 315 aa9.21□□□□□ -0.94
VPS13B-208ENST00000521037 UNC13AQ9UPW8 1703 aa9.2□□□□□ -0.94
VPS13B-208ENST00000521037 RIOK3O14730 519 aaKnown RBP9.19□□□□□ -0.94
VPS13B-208ENST00000521037 ZNF710Q8N1W2 664 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms