RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 GALR2O43603 387 aaPredicted RBP11.71□□□□□ -0.53
FAM49B-218ENST00000520887 POTEIP0CG38 1075 aa11.7□□□□□ -0.54
FAM49B-218ENST00000520887 RASEFQ8IZ41 740 aa11.69□□□□□ -0.54
FAM49B-218ENST00000520887 CCDC61Q9Y6R9 512 aa11.68□□□□□ -0.54
FAM49B-218ENST00000520887 VASPP50552 380 aaPredicted RBP11.64□□□□□ -0.55
FAM49B-218ENST00000520887 NUBP1P53384 320 aa11.64□□□□□ -0.55
FAM49B-218ENST00000520887 MS4A3Q96HJ5 214 aa11.62□□□□□ -0.55
FAM49B-218ENST00000520887 RB1CC1Q8TDY2 1594 aa11.6□□□□□ -0.55
FAM49B-218ENST00000520887 DCAF8L2P0C7V8 631 aa11.6□□□□□ -0.55
FAM49B-218ENST00000520887 KIF12Q96FN5 646 aa11.6□□□□□ -0.55
FAM49B-218ENST00000520887 NACADO15069 1562 aa11.58□□□□□ -0.55
FAM49B-218ENST00000520887 KLHL34Q8N239 644 aa11.58□□□□□ -0.56
FAM49B-218ENST00000520887 ZCCHC6Q5VYS8 1495 aaKnown RBP11.57□□□□□ -0.56
FAM49B-218ENST00000520887 FAM212AQ96EL1 285 aa11.57□□□□□ -0.56
FAM49B-218ENST00000520887 MAP3K13O43283 966 aa11.55□□□□□ -0.56
FAM49B-218ENST00000520887 LHX8Q68G74 356 aa11.54□□□□□ -0.56
FAM49B-218ENST00000520887 MYO15BQ96JP2 1530 aa11.52□□□□□ -0.57
FAM49B-218ENST00000520887 DCAF8Q5TAQ9 597 aa11.52□□□□□ -0.57
FAM49B-218ENST00000520887 DCAF1Q9Y4B6 1507 aa11.5□□□□□ -0.57
FAM49B-218ENST00000520887 ASTLQ6HA08 431 aaPredicted RBP11.49□□□□□ -0.57
FAM49B-218ENST00000520887 ATMINO43313 823 aaPredicted RBP11.48□□□□□ -0.57
FAM49B-218ENST00000520887 SGIP1Q9BQI5 828 aa11.48□□□□□ -0.57
FAM49B-218ENST00000520887 PELP1Q8IZL8 1130 aaKnown RBP11.47□□□□□ -0.57
FAM49B-218ENST00000520887 PCDHB13Q9Y5F0 798 aa11.47□□□□□ -0.57
FAM49B-218ENST00000520887 IFNLR1Q8IU57 520 aaPredicted RBP11.46□□□□□ -0.57
FAM49B-218ENST00000520887 TRPC6Q9Y210 931 aa11.44□□□□□ -0.58
FAM49B-218ENST00000520887 TIE1P35590 1138 aa11.42□□□□□ -0.58
FAM49B-218ENST00000520887 GSE1Q14687 1217 aa11.42□□□□□ -0.58
FAM49B-218ENST00000520887 BMP2KQ9NSY1 1161 aaPredicted RBP11.42□□□□□ -0.58
FAM49B-218ENST00000520887 PYGBP11216 843 aa11.41□□□□□ -0.58
FAM49B-218ENST00000520887 ATN1P54259 1190 aaPredicted RBP11.41□□□□□ -0.58
FAM49B-218ENST00000520887 IFNL1Q8IU54 200 aa11.4□□□□□ -0.58
FAM49B-218ENST00000520887 SLC39A7Q92504 469 aa11.4□□□□□ -0.58
FAM49B-218ENST00000520887 SPOCK2Q92563 424 aa11.4□□□□□ -0.58
FAM49B-218ENST00000520887 C7P10643 843 aa11.39□□□□□ -0.59
FAM49B-218ENST00000520887 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
FAM49B-218ENST00000520887 TTLL13PA6NNM8 815 aa11.36□□□□□ -0.59
FAM49B-218ENST00000520887 POTEB2H3BUK9 544 aa11.33□□□□□ -0.6
FAM49B-218ENST00000520887 CIZ1Q9ULV3 898 aaPredicted RBP11.31□□□□□ -0.6
FAM49B-218ENST00000520887 CHRM1P11229 460 aaPredicted RBP11.3□□□□□ -0.6
FAM49B-218ENST00000520887 PCDHB8Q9UN66 801 aa11.3□□□□□ -0.6
FAM49B-218ENST00000520887 TMEM106CQ9BVX2 250 aa11.29□□□□□ -0.6
FAM49B-218ENST00000520887 TRIM35Q9UPQ4 493 aa11.29□□□□□ -0.6
FAM49B-218ENST00000520887 ZNF467Q7Z7K2 595 aaPredicted RBP11.26□□□□□ -0.61
FAM49B-218ENST00000520887 SCRIBQ14160 1630 aa11.24□□□□□ -0.61
FAM49B-218ENST00000520887 OTUD5Q96G74 571 aa11.24□□□□□ -0.61
FAM49B-218ENST00000520887 POTEFA5A3E0 1075 aa11.23□□□□□ -0.61
FAM49B-218ENST00000520887 SEC24BO95487 1268 aa11.23□□□□□ -0.61
FAM49B-218ENST00000520887 IER5LQ5T953 404 aa11.23□□□□□ -0.61
FAM49B-218ENST00000520887 UNC13AQ9UPW8 1703 aa11.22□□□□□ -0.61
FAM49B-218ENST00000520887 COLQQ9Y215 455 aaPredicted RBP11.2□□□□□ -0.62
FAM49B-218ENST00000520887 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
FAM49B-218ENST00000520887 MAMSTRQ6ZN01 415 aa11.18□□□□□ -0.62
FAM49B-218ENST00000520887 TRIM41Q8WV44 630 aa11.16□□□□□ -0.62
FAM49B-218ENST00000520887 SHROOM4Q9ULL8 1493 aa11.16□□□□□ -0.62
FAM49B-218ENST00000520887 PSEN1P49768 467 aa11.15□□□□□ -0.62
FAM49B-218ENST00000520887 PLCG2P16885 1265 aa11.12□□□□□ -0.63
FAM49B-218ENST00000520887 PDAP1Q13442 181 aaKnown RBP11.12□□□□□ -0.63
FAM49B-218ENST00000520887 SCUBE2Q9NQ36 999 aa11.12□□□□□ -0.63
FAM49B-218ENST00000520887 IRX5P78411 483 aaPredicted RBP11.11□□□□□ -0.63
FAM49B-218ENST00000520887 GOLGA2Q08379 1002 aa11.11□□□□□ -0.63
FAM49B-218ENST00000520887 OCEL1Q9H607 264 aa11.09□□□□□ -0.63
FAM49B-218ENST00000520887 MKRN3Q13064 507 aaKnown RBP11.07□□□□□ -0.64
FAM49B-218ENST00000520887 BICRAQ9NZM4 1560 aa11.07□□□□□ -0.64
FAM49B-218ENST00000520887 CABP2Q9NPB3 220 aa11.01□□□□□ -0.65
FAM49B-218ENST00000520887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11□□□□□ -0.65
FAM49B-218ENST00000520887 RIOK3O14730 519 aaKnown RBP10.99□□□□□ -0.65
FAM49B-218ENST00000520887 RNF25Q96BH1 459 aaPredicted RBP10.98□□□□□ -0.65
FAM49B-218ENST00000520887 PDCD7Q8N8D1 485 aaKnown RBP10.97□□□□□ -0.65
FAM49B-218ENST00000520887 VGFO15240 615 aaPredicted RBP10.94□□□□□ -0.66
FAM49B-218ENST00000520887 SLAIN1Q8ND83 568 aa10.94□□□□□ -0.66
FAM49B-218ENST00000520887 ILDR1Q86SU0 546 aaPredicted RBP10.93□□□□□ -0.66
FAM49B-218ENST00000520887 L3MBTL3Q96JM7 780 aaPredicted RBP10.93□□□□□ -0.66
FAM49B-218ENST00000520887 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.92□□□□□ -0.66
FAM49B-218ENST00000520887 ECM2O94769 699 aaPredicted RBP10.92□□□□□ -0.66
FAM49B-218ENST00000520887 ZFP91Q96JP5 570 aaPredicted RBP10.92□□□□□ -0.66
FAM49B-218ENST00000520887 EFCAB3Q8N7B9 438 aa10.91□□□□□ -0.66
FAM49B-218ENST00000520887 FAM163AQ96GL9 167 aaPredicted RBP10.9□□□□□ -0.66
FAM49B-218ENST00000520887 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.9□□□□□ -0.66
FAM49B-218ENST00000520887 TAOK2Q9UL54 1235 aa10.9□□□□□ -0.66
FAM49B-218ENST00000520887 PKD2Q13563 968 aa10.89□□□□□ -0.67
FAM49B-218ENST00000520887 DPY19L2Q6NUT2 758 aa10.88□□□□□ -0.67
FAM49B-218ENST00000520887 EIF4G1Q04637 1599 aaKnown RBP10.86□□□□□ -0.67
FAM49B-218ENST00000520887 C3orf67Q6ZVT6 689 aa10.86□□□□□ -0.67
FAM49B-218ENST00000520887 POTEMA6NI47 508 aa10.84□□□□□ -0.67
FAM49B-218ENST00000520887 G3V3G9 751 aa10.83□□□□□ -0.68
FAM49B-218ENST00000520887 SOX12O15370 315 aa10.83□□□□□ -0.68
FAM49B-218ENST00000520887 POTEGQ6S5H5 508 aa10.83□□□□□ -0.68
FAM49B-218ENST00000520887 LCE2DQ5TA82 110 aaPredicted RBP10.82□□□□□ -0.68
FAM49B-218ENST00000520887 BCL11BQ9C0K0 894 aaPredicted RBP10.82□□□□□ -0.68
FAM49B-218ENST00000520887 BAZ1AQ9NRL2 1556 aaPredicted RBP10.82□□□□□ -0.68
FAM49B-218ENST00000520887 RGL2O15211 777 aa10.81□□□□□ -0.68
FAM49B-218ENST00000520887 BOLA1Q9Y3E2 137 aa10.81□□□□□ -0.68
FAM49B-218ENST00000520887 STK24Q9Y6E0 443 aa10.79□□□□□ -0.68
FAM49B-218ENST00000520887 CC2D2AQ9P2K1 1620 aa10.79□□□□□ -0.68
FAM49B-218ENST00000520887 STK25O00506 426 aa10.78□□□□□ -0.68
FAM49B-218ENST00000520887 SNPHO15079 494 aa10.77□□□□□ -0.69
FAM49B-218ENST00000520887 PHF8Q9UPP1 1060 aa10.76□□□□□ -0.69
FAM49B-218ENST00000520887 SMARCA4P51532 1647 aa10.76□□□□□ -0.69
FAM49B-218ENST00000520887 ST18O60284 1047 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms