RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 TRIM44Q96DX7 344 aaPredicted RBP16.1■□□□□ 0.17
ERGIC1-208ENST00000520399 CEP162Q5TB80 1403 aa16.1■□□□□ 0.17
ERGIC1-208ENST00000520399 BAZ1BQ9UIG0 1483 aaKnown RBP16.09■□□□□ 0.17
ERGIC1-208ENST00000520399 DEKP35659 375 aaKnown RBP16.07■□□□□ 0.16
ERGIC1-208ENST00000520399 TMC1Q8TDI8 760 aa16.07■□□□□ 0.16
ERGIC1-208ENST00000520399 RTN4Q9NQC3 1192 aaKnown RBP16.07■□□□□ 0.16
ERGIC1-208ENST00000520399 WRNQ14191 1432 aaPredicted RBP eCLIP16.06■□□□□ 0.16
ERGIC1-208ENST00000520399 KDM2AQ9Y2K7 1162 aa16.05■□□□□ 0.16
ERGIC1-208ENST00000520399 WDR43Q15061 677 aaKnown RBP eCLIP16.05■□□□□ 0.16
ERGIC1-208ENST00000520399 PODXL2Q9NZ53 605 aa16.03■□□□□ 0.16
ERGIC1-208ENST00000520399 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
ERGIC1-208ENST00000520399 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.03■□□□□ 0.16
ERGIC1-208ENST00000520399 SALL2Q9Y467 1007 aaPredicted RBP16.02■□□□□ 0.16
ERGIC1-208ENST00000520399 MRS2Q9HD23 443 aa16.01■□□□□ 0.15
ERGIC1-208ENST00000520399 NAP1L5Q96NT1 182 aaPredicted RBP16.01■□□□□ 0.15
ERGIC1-208ENST00000520399 CEP164Q9UPV0 1460 aa16■□□□□ 0.15
ERGIC1-208ENST00000520399 RRP7BPQ9NSQ0 103 aa16■□□□□ 0.15
ERGIC1-208ENST00000520399 KIF27Q86VH2 1401 aa15.99■□□□□ 0.15
ERGIC1-208ENST00000520399 EIF4G2P78344 907 aaKnown RBP eCLIP15.97■□□□□ 0.15
ERGIC1-208ENST00000520399 CCDC136Q96JN2 1154 aa15.97■□□□□ 0.15
ERGIC1-208ENST00000520399 TNIKQ9UKE5 1360 aa15.97■□□□□ 0.15
ERGIC1-208ENST00000520399 PKNOX2Q96KN3 472 aa15.96■□□□□ 0.15
ERGIC1-208ENST00000520399 MIER1Q8N108 512 aa15.95■□□□□ 0.14
ERGIC1-208ENST00000520399 BAZ1AQ9NRL2 1556 aaPredicted RBP15.95■□□□□ 0.14
ERGIC1-208ENST00000520399 PLEKHD1A6NEE1 506 aa15.93■□□□□ 0.14
ERGIC1-208ENST00000520399 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.92■□□□□ 0.14
ERGIC1-208ENST00000520399 ARXQ96QS3 562 aa15.92■□□□□ 0.14
ERGIC1-208ENST00000520399 HIRIP3Q9BW71 556 aaPredicted RBP15.92■□□□□ 0.14
ERGIC1-208ENST00000520399 PPM1GO15355 546 aaPredicted RBP15.91■□□□□ 0.14
ERGIC1-208ENST00000520399 KCNH8Q96L42 1107 aa15.89■□□□□ 0.13
ERGIC1-208ENST00000520399 ZRSR1Q15695 479 aaKnown RBP15.86■□□□□ 0.13
ERGIC1-208ENST00000520399 MYH16Q9H6N6 1097 aa15.85■□□□□ 0.13
ERGIC1-208ENST00000520399 VSIG10Q8N0Z9 540 aa15.84■□□□□ 0.13
ERGIC1-208ENST00000520399 CFDP1Q9UEE9 299 aaPredicted RBP15.83■□□□□ 0.13
ERGIC1-208ENST00000520399 NOP58Q9Y2X3 529 aaKnown RBP15.83■□□□□ 0.12
ERGIC1-208ENST00000520399 DDRGK1Q96HY6 314 aa15.83■□□□□ 0.12
ERGIC1-208ENST00000520399 RSPH6AQ9H0K4 717 aa15.82■□□□□ 0.12
ERGIC1-208ENST00000520399 IRX6P78412 446 aaPredicted RBP15.82■□□□□ 0.12
ERGIC1-208ENST00000520399 TULP1O00294 542 aaPredicted RBP15.81■□□□□ 0.12
ERGIC1-208ENST00000520399 PPP1R15AO75807 674 aaPredicted RBP15.81■□□□□ 0.12
ERGIC1-208ENST00000520399 ERCC6Q03468 1493 aa15.79■□□□□ 0.12
ERGIC1-208ENST00000520399 A0A0G2JS52 829 aa15.79■□□□□ 0.12
ERGIC1-208ENST00000520399 GOLGA6L22H0YM25 854 aa15.78■□□□□ 0.12
ERGIC1-208ENST00000520399 RGL3Q3MIN7 710 aa15.78■□□□□ 0.12
ERGIC1-208ENST00000520399 CDCA8Q53HL2 280 aa15.78■□□□□ 0.12
ERGIC1-208ENST00000520399 PTMAP06454 111 aaKnown RBP15.77■□□□□ 0.12
ERGIC1-208ENST00000520399 CECR2Q9BXF3 1484 aa15.77■□□□□ 0.11
ERGIC1-208ENST00000520399 FHAD1B1AJZ9 1412 aa15.76■□□□□ 0.11
ERGIC1-208ENST00000520399 EIF4G1Q04637 1599 aaKnown RBP15.75■□□□□ 0.11
ERGIC1-208ENST00000520399 CARD11Q9BXL7 1154 aa15.74■□□□□ 0.11
ERGIC1-208ENST00000520399 CFAP53Q96M91 514 aa15.74■□□□□ 0.11
ERGIC1-208ENST00000520399 SENP3Q9H4L4 574 aaPredicted RBP15.73■□□□□ 0.11
ERGIC1-208ENST00000520399 KNSTRNQ9Y448 316 aa15.73■□□□□ 0.11
ERGIC1-208ENST00000520399 DNTTIP2Q5QJE6 756 aaKnown RBP15.73■□□□□ 0.11
ERGIC1-208ENST00000520399 SUPT16HQ9Y5B9 1047 aaKnown RBP15.73■□□□□ 0.11
ERGIC1-208ENST00000520399 ZBTB7CA1YPR0 619 aa15.72■□□□□ 0.11
ERGIC1-208ENST00000520399 GOLGA6L6A8MZA4 724 aa15.72■□□□□ 0.11
ERGIC1-208ENST00000520399 BECN1Q14457 450 aa15.72■□□□□ 0.11
ERGIC1-208ENST00000520399 HSP90AA2PQ14568 343 aaPredicted RBP15.71■□□□□ 0.11
ERGIC1-208ENST00000520399 CCNB3Q8WWL7 1395 aa15.71■□□□□ 0.11
ERGIC1-208ENST00000520399 CUX2O14529 1486 aa15.7■□□□□ 0.1
ERGIC1-208ENST00000520399 C14orf37Q86TY3 774 aa15.7■□□□□ 0.1
ERGIC1-208ENST00000520399 CARMIL1Q5VZK9 1371 aa15.69■□□□□ 0.1
ERGIC1-208ENST00000520399 RBM19Q9Y4C8 960 aaKnown RBP15.68■□□□□ 0.1
ERGIC1-208ENST00000520399 SOGA1O94964 1423 aa15.68■□□□□ 0.1
ERGIC1-208ENST00000520399 SIN3AQ96ST3 1273 aa15.67■□□□□ 0.1
ERGIC1-208ENST00000520399 PTMSP20962 102 aa15.66■□□□□ 0.1
ERGIC1-208ENST00000520399 A0A0U1RQG5 324 aaPredicted RBP15.66■□□□□ 0.1
ERGIC1-208ENST00000520399 CCDC88BA6NC98 1476 aa15.65■□□□□ 0.1
ERGIC1-208ENST00000520399 ARID4BQ4LE39 1312 aaPredicted RBP15.64■□□□□ 0.09
ERGIC1-208ENST00000520399 L1TD1Q5T7N2 865 aaKnown RBP15.64■□□□□ 0.09
ERGIC1-208ENST00000520399 NCBP3Q53F19 620 aaKnown RBP15.63■□□□□ 0.09
ERGIC1-208ENST00000520399 AMER1Q5JTC6 1135 aaPredicted RBP15.63■□□□□ 0.09
ERGIC1-208ENST00000520399 SMARCA2P51531 1590 aa15.63■□□□□ 0.09
ERGIC1-208ENST00000520399 MROH2BQ7Z745 1585 aa15.63■□□□□ 0.09
ERGIC1-208ENST00000520399 CASC1Q6TDU7 716 aa15.63■□□□□ 0.09
ERGIC1-208ENST00000520399 PNNQ9H307 717 aaKnown RBP15.62■□□□□ 0.09
ERGIC1-208ENST00000520399 TSHZ2Q9NRE2 1034 aa15.62■□□□□ 0.09
ERGIC1-208ENST00000520399 ARHGAP35Q9NRY4 1499 aa15.62■□□□□ 0.09
ERGIC1-208ENST00000520399 ABCC8Q09428 1581 aa15.61■□□□□ 0.09
ERGIC1-208ENST00000520399 PLEKHG5O94827 1062 aa15.6■□□□□ 0.09
ERGIC1-208ENST00000520399 NRDCO43847 1150 aa15.6■□□□□ 0.09
ERGIC1-208ENST00000520399 KANK1Q14678 1352 aa15.59■□□□□ 0.09
ERGIC1-208ENST00000520399 ANO8Q9HCE9 1232 aaPredicted RBP15.59■□□□□ 0.09
ERGIC1-208ENST00000520399 MAPK8IP3Q9UPT6 1336 aa15.59■□□□□ 0.09
ERGIC1-208ENST00000520399 VPS8Q8N3P4 1428 aa15.59■□□□□ 0.09
ERGIC1-208ENST00000520399 FTSJ3Q8IY81 847 aaKnown RBP15.58■□□□□ 0.08
ERGIC1-208ENST00000520399 SETD5Q9C0A6 1442 aa15.58■□□□□ 0.08
ERGIC1-208ENST00000520399 NUDCQ9Y266 331 aa15.57■□□□□ 0.08
ERGIC1-208ENST00000520399 POGKQ9P215 609 aa15.57■□□□□ 0.08
ERGIC1-208ENST00000520399 CLSTN1O94985 981 aa15.57■□□□□ 0.08
ERGIC1-208ENST00000520399 SENP3-EIF4A1A0A087X0R7 540 aa15.56■□□□□ 0.08
ERGIC1-208ENST00000520399 UBE2Q2Q8WVN8 375 aa15.56■□□□□ 0.08
ERGIC1-208ENST00000520399 CC2D1BQ5T0F9 858 aaKnown RBP15.55■□□□□ 0.08
ERGIC1-208ENST00000520399 TIMELESSQ9UNS1 1208 aa15.55■□□□□ 0.08
ERGIC1-208ENST00000520399 TOP2AP11388 1531 aaKnown RBP15.54■□□□□ 0.08
ERGIC1-208ENST00000520399 TMF1P82094 1093 aa15.54■□□□□ 0.08
ERGIC1-208ENST00000520399 TNNT3P45378 269 aaPredicted RBP15.53■□□□□ 0.08
ERGIC1-208ENST00000520399 PPP4R2Q9NY27 417 aa15.53■□□□□ 0.08
ERGIC1-208ENST00000520399 LAS1LQ9Y4W2 734 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms