RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 TTBK1Q5TCY1 1321 aaPredicted RBP41.59■■■■■ 4.25
COL13A1-212ENST00000520133 FHAD1B1AJZ9 1412 aa41.54■■■■■ 4.24
COL13A1-212ENST00000520133 ZNF608Q9ULD9 1512 aaPredicted RBP41.52■■■■■ 4.24
COL13A1-212ENST00000520133 ADAMTS12P58397 1594 aa41.5■■■■■ 4.23
COL13A1-212ENST00000520133 EFCAB5A4FU69 1503 aa41.49■■■■■ 4.23
COL13A1-212ENST00000520133 EIF4G3O43432 1585 aaKnown RBP41.43■■■■■ 4.22
COL13A1-212ENST00000520133 SNAPC4Q5SXM2 1469 aa41.25■■■■■ 4.19
COL13A1-212ENST00000520133 P3H3Q8IVL6 736 aa41.24■■■■■ 4.19
COL13A1-212ENST00000520133 FHOD3Q2V2M9 1422 aa41.24■■■■■ 4.19
COL13A1-212ENST00000520133 SAMD9Q5K651 1589 aa41.23■■■■■ 4.19
COL13A1-212ENST00000520133 MAP3K1Q13233 1512 aa41.22■■■■■ 4.19
COL13A1-212ENST00000520133 MAGI1Q96QZ7 1491 aaPredicted RBP41.19■■■■■ 4.18
COL13A1-212ENST00000520133 IQGAP2Q13576 1575 aa41.16■■■■■ 4.18
COL13A1-212ENST00000520133 PCF11O94913 1555 aaKnown RBP41.14■■■■■ 4.18
COL13A1-212ENST00000520133 FMN1Q68DA7 1419 aa41.14■■■■■ 4.18
COL13A1-212ENST00000520133 KANK4Q5T7N3 995 aaPredicted RBP41.14■■■■■ 4.18
COL13A1-212ENST00000520133 TIAM1Q13009 1591 aa41.13■■■■■ 4.18
COL13A1-212ENST00000520133 FYCO1Q9BQS8 1478 aa41.1■■■■■ 4.17
COL13A1-212ENST00000520133 GRIN2AQ12879 1464 aa41.09■■■■■ 4.17
COL13A1-212ENST00000520133 CASKIN1Q8WXD9 1431 aa41.07■■■■■ 4.16
COL13A1-212ENST00000520133 SYNJ2O15056 1496 aa41.03■■■■■ 4.16
COL13A1-212ENST00000520133 CFAP43Q8NDM7 1665 aa41.03■■■■■ 4.16
COL13A1-212ENST00000520133 ZEB1P37275 1124 aaPredicted RBP41.01■■■■■ 4.16
COL13A1-212ENST00000520133 KIAA0586Q9BVV6 1533 aa40.99■■■■■ 4.15
COL13A1-212ENST00000520133 CHMP7Q8WUX9 453 aaPredicted RBP40.95■■■■■ 4.15
COL13A1-212ENST00000520133 UGGT2Q9NYU1 1516 aa40.94■■■■■ 4.14
COL13A1-212ENST00000520133 LRRC9Q6ZRR7 1453 aa40.93■■■■■ 4.14
COL13A1-212ENST00000520133 ATP1B4Q9UN42 357 aaPredicted RBP40.92■■■■■ 4.14
COL13A1-212ENST00000520133 RRBP1Q9P2E9 1410 aaKnown RBP40.82■■■■■ 4.13
COL13A1-212ENST00000520133 CEP170Q5SW79 1584 aa40.8■■■■■ 4.12
COL13A1-212ENST00000520133 FBLN2P98095 1184 aa40.79■■■■■ 4.12
COL13A1-212ENST00000520133 HNRNPUL2Q1KMD3 747 aaKnown RBP40.77■■■■■ 4.12
COL13A1-212ENST00000520133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.75■■■■■ 4.11
COL13A1-212ENST00000520133 NUP160Q12769 1436 aa40.74■■■■■ 4.11
COL13A1-212ENST00000520133 KIAA0556O60303 1618 aa40.72■■■■■ 4.11
COL13A1-212ENST00000520133 CCER1Q8TC90 406 aaPredicted RBP40.72■■■■■ 4.11
COL13A1-212ENST00000520133 LRRIQ1Q96JM4 1722 aa40.7■■■■■ 4.11
COL13A1-212ENST00000520133 DISP1Q96F81 1524 aa40.69■■■■■ 4.1
COL13A1-212ENST00000520133 CCNB3Q8WWL7 1395 aa40.68■■■■■ 4.1
COL13A1-212ENST00000520133 HECW1Q76N89 1606 aa40.66■■■■■ 4.1
COL13A1-212ENST00000520133 CCDC18Q5T9S5 1454 aa40.62■■■■■ 4.09
COL13A1-212ENST00000520133 MTUS2Q5JR59 1369 aa40.57■■■■■ 4.08
COL13A1-212ENST00000520133 PHLDB1Q86UU1 1377 aa40.55■■■■■ 4.08
COL13A1-212ENST00000520133 CARMIL2Q6F5E8 1435 aa40.5■■■■■ 4.07
COL13A1-212ENST00000520133 JPH4Q96JJ6 628 aa40.49■■■■■ 4.07
COL13A1-212ENST00000520133 EHBP1L1Q8N3D4 1523 aa40.48■■■■■ 4.07
COL13A1-212ENST00000520133 CHD1O14646 1710 aa40.48■■■■■ 4.07
COL13A1-212ENST00000520133 EPRSP07814 1512 aaKnown RBP40.47■■■■■ 4.07
COL13A1-212ENST00000520133 SUPT6HQ7KZ85 1726 aaKnown RBP40.43■■■■■ 4.06
COL13A1-212ENST00000520133 RAPGEF6Q8TEU7 1601 aa40.4■■■■■ 4.06
COL13A1-212ENST00000520133 NCOA2Q15596 1464 aa40.33■■■■■ 4.05
COL13A1-212ENST00000520133 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.32■■■■■ 4.05
COL13A1-212ENST00000520133 CDK13Q14004 1512 aaKnown RBP40.31■■■■■ 4.04
COL13A1-212ENST00000520133 MAGI3Q5TCQ9 1506 aa40.3■■■■■ 4.04
COL13A1-212ENST00000520133 FAM50AQ14320 339 aaKnown RBP40.28■■■■■ 4.04
COL13A1-212ENST00000520133 NUP153P49790 1475 aaKnown RBP40.27■■■■■ 4.04
COL13A1-212ENST00000520133 FGD6Q6ZV73 1430 aa40.27■■■■■ 4.04
COL13A1-212ENST00000520133 ITGAEP38570 1179 aa40.25■■■■■ 4.03
COL13A1-212ENST00000520133 ARHGEF11O15085 1522 aa40.23■■■■■ 4.03
COL13A1-212ENST00000520133 MYOM3Q5VTT5 1437 aa40.22■■■■■ 4.03
COL13A1-212ENST00000520133 PRG4Q92954 1404 aaPredicted RBP40.17■■■■■ 4.02
COL13A1-212ENST00000520133 PLB1Q6P1J6 1458 aa40.17■■■■■ 4.02
COL13A1-212ENST00000520133 ARID3CA6NKF2 412 aa40.14■■■■■ 4.02
COL13A1-212ENST00000520133 CDK11AQ9UQ88 783 aaPredicted RBP40.14■■■■■ 4.02
COL13A1-212ENST00000520133 SHROOM2Q13796 1616 aa40.14■■■■■ 4.02
COL13A1-212ENST00000520133 ABCA8O94911 1581 aa40.08■■■■■ 4.01
COL13A1-212ENST00000520133 PTPN23Q9H3S7 1636 aa40.04■■■■■ 4
COL13A1-212ENST00000520133 PTPRGP23470 1445 aa40.01■■■■□ 3.99
COL13A1-212ENST00000520133 SETD5Q9C0A6 1442 aa40.01■■■■□ 3.99
COL13A1-212ENST00000520133 CLSPNQ9HAW4 1339 aa40■■■■□ 3.99
COL13A1-212ENST00000520133 DHX57Q6P158 1386 aaKnown RBP40■■■■□ 3.99
COL13A1-212ENST00000520133 MIA2Q96PC5 1412 aa39.97■■■■□ 3.99
COL13A1-212ENST00000520133 RAB3GAP2Q9H2M9 1393 aa39.97■■■■□ 3.99
COL13A1-212ENST00000520133 TROQ12816 1431 aaPredicted RBP39.96■■■■□ 3.99
COL13A1-212ENST00000520133 CLASP1Q7Z460 1538 aa39.95■■■■□ 3.99
COL13A1-212ENST00000520133 TCOF1Q13428 1488 aaKnown RBP39.95■■■■□ 3.99
COL13A1-212ENST00000520133 ADCY10Q96PN6 1610 aa39.87■■■■□ 3.97
COL13A1-212ENST00000520133 ATP10BO94823 1461 aa39.84■■■■□ 3.97
COL13A1-212ENST00000520133 PLEKHD1A6NEE1 506 aa39.79■■■■□ 3.96
COL13A1-212ENST00000520133 UACAQ9BZF9 1416 aa39.78■■■■□ 3.96
COL13A1-212ENST00000520133 PTPRKQ15262 1439 aa39.77■■■■□ 3.96
COL13A1-212ENST00000520133 ERCC6L2Q5T890 1561 aa39.77■■■■□ 3.96
COL13A1-212ENST00000520133 ITSN2Q9NZM3 1697 aa39.77■■■■□ 3.96
COL13A1-212ENST00000520133 HFM1A2PYH4 1435 aa39.74■■■■□ 3.95
COL13A1-212ENST00000520133 KIF14Q15058 1648 aa39.72■■■■□ 3.95
COL13A1-212ENST00000520133 ABCC2Q92887 1545 aa39.64■■■■□ 3.94
COL13A1-212ENST00000520133 GPATCH8Q9UKJ3 1502 aaKnown RBP39.63■■■■□ 3.93
COL13A1-212ENST00000520133 NAIPQ13075 1403 aa39.61■■■■□ 3.93
COL13A1-212ENST00000520133 AKNAQ7Z591 1439 aa39.59■■■■□ 3.93
COL13A1-212ENST00000520133 CFDP1Q9UEE9 299 aaPredicted RBP39.58■■■■□ 3.93
COL13A1-212ENST00000520133 DNMT1P26358 1616 aaKnown RBP39.58■■■■□ 3.93
COL13A1-212ENST00000520133 GCC2Q8IWJ2 1684 aa39.55■■■■□ 3.92
COL13A1-212ENST00000520133 ABCC10Q5T3U5 1492 aa39.55■■■■□ 3.92
COL13A1-212ENST00000520133 MAPKBP1O60336 1514 aa39.54■■■■□ 3.92
COL13A1-212ENST00000520133 DAPK1P53355 1430 aa39.54■■■■□ 3.92
COL13A1-212ENST00000520133 CDC42BPAQ5VT25 1732 aa39.53■■■■□ 3.92
COL13A1-212ENST00000520133 CAMSAP2Q08AD1 1489 aa39.51■■■■□ 3.92
COL13A1-212ENST00000520133 UHRF1BP1LA0JNW5 1464 aa39.5■■■■□ 3.91
COL13A1-212ENST00000520133 CHIC2Q9UKJ5 165 aa39.49■■■■□ 3.91
COL13A1-212ENST00000520133 ZNF644Q9H582 1327 aaPredicted RBP39.49■■■■□ 3.91
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms